RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 H3BNH8 94 aa14.22□□□□□ -0.13
RPAIN-206ENST00000539417 AP3D1O14617 1153 aa14.22□□□□□ -0.13
RPAIN-206ENST00000539417 EIF4E2O60573 245 aaKnown RBP14.22□□□□□ -0.13
RPAIN-206ENST00000539417 TOXO94900 526 aa14.22□□□□□ -0.13
RPAIN-206ENST00000539417 CPN1P15169 458 aa14.22□□□□□ -0.13
RPAIN-206ENST00000539417 ZNF708P17019 499 aa14.22□□□□□ -0.13
RPAIN-206ENST00000539417 ADSLP30566 484 aaPredicted RBP14.22□□□□□ -0.13
RPAIN-206ENST00000539417 GZMMP51124 257 aa14.22□□□□□ -0.13
RPAIN-206ENST00000539417 CCR4P51679 360 aa14.22□□□□□ -0.13
RPAIN-206ENST00000539417 CRISP3P54108 245 aa14.22□□□□□ -0.13
RPAIN-206ENST00000539417 TRMT5Q32P41 509 aaKnown RBP14.22□□□□□ -0.13
RPAIN-206ENST00000539417 RABL3Q5HYI8 236 aa14.22□□□□□ -0.13
RPAIN-206ENST00000539417 HIST2H2BCQ6DN03 193 aa14.22□□□□□ -0.13
RPAIN-206ENST00000539417 NANOGP8Q6NSW7 305 aa14.22□□□□□ -0.13
RPAIN-206ENST00000539417 COMTD1Q86VU5 262 aa14.22□□□□□ -0.13
RPAIN-206ENST00000539417 CCDC71Q8IV32 467 aaPredicted RBP14.22□□□□□ -0.13
RPAIN-206ENST00000539417 UBQLNLQ8IYU4 475 aa14.22□□□□□ -0.13
RPAIN-206ENST00000539417 OR5W2Q8NH69 310 aa14.22□□□□□ -0.13
RPAIN-206ENST00000539417 SMPDL3BQ92485 455 aa14.22□□□□□ -0.13
RPAIN-206ENST00000539417 LRRC58Q96CX6 371 aa14.22□□□□□ -0.13
RPAIN-206ENST00000539417 THUMPD3Q9BV44 507 aaKnown RBP14.22□□□□□ -0.13
RPAIN-206ENST00000539417 NSRP1Q9H0G5 558 aaKnown RBP14.22□□□□□ -0.13
RPAIN-206ENST00000539417 RAD21L1Q9H4I0 556 aa14.22□□□□□ -0.13
RPAIN-206ENST00000539417 PIF1Q9H611 641 aa14.22□□□□□ -0.13
RPAIN-206ENST00000539417 NANOGQ9H9S0 305 aa14.22□□□□□ -0.13
RPAIN-206ENST00000539417 GMPR2Q9P2T1 348 aaKnown RBP14.22□□□□□ -0.13
RPAIN-206ENST00000539417 DOPEY1Q5JWR5 2465 aa14.22□□□□□ -0.13
RPAIN-206ENST00000539417 USP9YO00507 2555 aaPredicted RBP14.22□□□□□ -0.13
RPAIN-206ENST00000539417 PCNX1Q96RV3 2341 aa14.22□□□□□ -0.13
RPAIN-206ENST00000539417 FIGNL2A6NMB9 653 aa14.21□□□□□ -0.13
RPAIN-206ENST00000539417 CCDC22O60826 627 aa14.21□□□□□ -0.13
RPAIN-206ENST00000539417 DNAJA2O60884 412 aa14.21□□□□□ -0.13
RPAIN-206ENST00000539417 WDR1O75083 606 aa14.21□□□□□ -0.13
RPAIN-206ENST00000539417 PGM3O95394 542 aa14.21□□□□□ -0.13
RPAIN-206ENST00000539417 NUDT14O95848 222 aa14.21□□□□□ -0.13
RPAIN-206ENST00000539417 COX4I1P13073 169 aa14.21□□□□□ -0.13
RPAIN-206ENST00000539417 PPIBP23284 216 aaKnown RBP14.21□□□□□ -0.13
RPAIN-206ENST00000539417 SHC1P29353 583 aa14.21□□□□□ -0.13
RPAIN-206ENST00000539417 CYLC2Q14093 348 aaPredicted RBP14.21□□□□□ -0.13
RPAIN-206ENST00000539417 QPRTQ15274 297 aa14.21□□□□□ -0.13
RPAIN-206ENST00000539417 MMEL1Q495T6 779 aa14.21□□□□□ -0.13
RPAIN-206ENST00000539417 GLYR1Q49A26 553 aaPredicted RBP14.21□□□□□ -0.13
RPAIN-206ENST00000539417 MRPL2Q5T653 305 aaKnown RBP14.21□□□□□ -0.13
RPAIN-206ENST00000539417 AAGABQ6PD74 315 aa14.21□□□□□ -0.13
RPAIN-206ENST00000539417 ZNF836Q6ZNA1 936 aa14.21□□□□□ -0.13
RPAIN-206ENST00000539417 EIF3MQ7L2H7 374 aaKnown RBP14.21□□□□□ -0.13
RPAIN-206ENST00000539417 MRGPRGQ86SM5 289 aa14.21□□□□□ -0.13
RPAIN-206ENST00000539417 GGNQ86UU5 652 aa14.21□□□□□ -0.13
RPAIN-206ENST00000539417 CLIP4Q8N3C7 705 aa14.21□□□□□ -0.13
RPAIN-206ENST00000539417 GTPBP8Q8N3Z3 284 aaPredicted RBP14.21□□□□□ -0.13
RPAIN-206ENST00000539417 OR52P1PQ8NH57 321 aa14.21□□□□□ -0.13
RPAIN-206ENST00000539417 FBXO27Q8NI29 283 aa14.21□□□□□ -0.13
RPAIN-206ENST00000539417 PHF10Q8WUB8 498 aaKnown RBP14.21□□□□□ -0.13
RPAIN-206ENST00000539417 WDR60Q8WVS4 1066 aa14.21□□□□□ -0.13
RPAIN-206ENST00000539417 TMEM185BQ9H7F4 350 aa14.21□□□□□ -0.13
RPAIN-206ENST00000539417 KAT8Q9H7Z6 458 aaKnown RBP14.21□□□□□ -0.13
RPAIN-206ENST00000539417 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.21□□□□□ -0.13
RPAIN-206ENST00000539417 DNAJB12Q9NXW2 375 aaKnown RBP14.21□□□□□ -0.13
RPAIN-206ENST00000539417 SUCOQ9UBS9 1254 aaKnown RBP14.21□□□□□ -0.13
RPAIN-206ENST00000539417 ARHGAP21Q5T5U3 1957 aa14.21□□□□□ -0.14
RPAIN-206ENST00000539417 A0A087WZY1 265 aa14.2□□□□□ -0.14
RPAIN-206ENST00000539417 A0A0G2JPF8 293 aa14.2□□□□□ -0.14
RPAIN-206ENST00000539417 EVPLLA8MZ36 301 aa14.2□□□□□ -0.14
RPAIN-206ENST00000539417 HNRNPCL2B2RXH8 293 aa14.2□□□□□ -0.14
RPAIN-206ENST00000539417 HNRNPCL3B7ZW38 293 aa14.2□□□□□ -0.14
RPAIN-206ENST00000539417 SEC14L5O43304 696 aa14.2□□□□□ -0.14
RPAIN-206ENST00000539417 HNRNPCL1O60812 293 aaKnown RBP14.2□□□□□ -0.14
RPAIN-206ENST00000539417 GCM2O75603 506 aaPredicted RBP14.2□□□□□ -0.14
RPAIN-206ENST00000539417 DBIP07108 87 aaKnown RBP14.2□□□□□ -0.14
RPAIN-206ENST00000539417 HNRNPCL4P0DMR1 293 aa14.2□□□□□ -0.14
RPAIN-206ENST00000539417 NID1P14543 1247 aa14.2□□□□□ -0.14
RPAIN-206ENST00000539417 PRKCAP17252 672 aa14.2□□□□□ -0.14
RPAIN-206ENST00000539417 POU3F2P20265 443 aaPredicted RBP14.2□□□□□ -0.14
RPAIN-206ENST00000539417 RYKP34925 604 aa14.2□□□□□ -0.14
RPAIN-206ENST00000539417 ZNF41P51814 821 aaPredicted RBP14.2□□□□□ -0.14
RPAIN-206ENST00000539417 EEF1A1P68104 462 aaKnown RBP14.2□□□□□ -0.14
RPAIN-206ENST00000539417 CDK6Q00534 326 aa14.2□□□□□ -0.14
RPAIN-206ENST00000539417 COQ5Q5HYK3 327 aa14.2□□□□□ -0.14
RPAIN-206ENST00000539417 ENPP6Q6UWR7 440 aa14.2□□□□□ -0.14
RPAIN-206ENST00000539417 B3GNT6Q6ZMB0 384 aa14.2□□□□□ -0.14
RPAIN-206ENST00000539417 LIX1LQ8IVB5 337 aa14.2□□□□□ -0.14
RPAIN-206ENST00000539417 ZZZ3Q8IYH5 903 aa14.2□□□□□ -0.14
RPAIN-206ENST00000539417 NAXEQ8NCW5 288 aa14.2□□□□□ -0.14
RPAIN-206ENST00000539417 OR10A6Q8NH74 314 aa14.2□□□□□ -0.14
RPAIN-206ENST00000539417 TRIB1Q96RU8 372 aa14.2□□□□□ -0.14
RPAIN-206ENST00000539417 CCT8L2Q96SF2 557 aa14.2□□□□□ -0.14
RPAIN-206ENST00000539417 PIGQQ9BRB3 760 aa14.2□□□□□ -0.14
RPAIN-206ENST00000539417 BCL2L10Q9HD36 194 aa14.2□□□□□ -0.14
RPAIN-206ENST00000539417 RNF6Q9Y252 685 aa14.2□□□□□ -0.14
RPAIN-206ENST00000539417 ZNF443Q9Y2A4 671 aaPredicted RBP14.2□□□□□ -0.14
RPAIN-206ENST00000539417 ASH1LQ9NR48 2969 aaKnown RBP14.2□□□□□ -0.14
RPAIN-206ENST00000539417 A0A0G2JNJ9 132 aa14.19□□□□□ -0.14
RPAIN-206ENST00000539417 C7orf72A4D263 438 aa14.19□□□□□ -0.14
RPAIN-206ENST00000539417 BBIP1A8MTZ0 92 aa14.19□□□□□ -0.14
RPAIN-206ENST00000539417 AHRRA9YTQ3 701 aa14.19□□□□□ -0.14
RPAIN-206ENST00000539417 H0Y3Z8 333 aa14.19□□□□□ -0.14
RPAIN-206ENST00000539417 SLC22A2O15244 555 aa14.19□□□□□ -0.14
RPAIN-206ENST00000539417 TPST1O60507 370 aa14.19□□□□□ -0.14
RPAIN-206ENST00000539417 NTN1O95631 604 aa14.19□□□□□ -0.14
RPAIN-206ENST00000539417 EPPINO95925 133 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms