RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 C2orf42Q9NWW7 574 aa13.63□□□□□ -0.23
CACNB1-206ENST00000539338 NAALAD2Q9Y3Q0 740 aa13.63□□□□□ -0.23
CACNB1-206ENST00000539338 C17orf105B2RV13 164 aa13.63□□□□□ -0.23
CACNB1-206ENST00000539338 SEC14L5O43304 696 aa13.63□□□□□ -0.23
CACNB1-206ENST00000539338 SNAPC5O75971 98 aa13.63□□□□□ -0.23
CACNB1-206ENST00000539338 GASTP01350 101 aa13.63□□□□□ -0.23
CACNB1-206ENST00000539338 IMPA1P29218 277 aa13.63□□□□□ -0.23
CACNB1-206ENST00000539338 TNFSF8P32971 234 aa13.63□□□□□ -0.23
CACNB1-206ENST00000539338 RACK1P63244 317 aaKnown RBP13.63□□□□□ -0.23
CACNB1-206ENST00000539338 PLP2Q04941 152 aa13.63□□□□□ -0.23
CACNB1-206ENST00000539338 NKPD1Q17RQ9 610 aa13.63□□□□□ -0.23
CACNB1-206ENST00000539338 OR2G6Q5TZ20 316 aa13.63□□□□□ -0.23
CACNB1-206ENST00000539338 TANGO2Q6ICL3 276 aa13.63□□□□□ -0.23
CACNB1-206ENST00000539338 CFAP77Q6ZQR2 320 aa13.63□□□□□ -0.23
CACNB1-206ENST00000539338 VRK3Q8IV63 474 aa13.63□□□□□ -0.23
CACNB1-206ENST00000539338 ADAMTS18Q8TE60 1221 aa13.63□□□□□ -0.23
CACNB1-206ENST00000539338 BORCS8Q96FH0 119 aa13.63□□□□□ -0.23
CACNB1-206ENST00000539338 ZNF486Q96H40 463 aaPredicted RBP13.63□□□□□ -0.23
CACNB1-206ENST00000539338 EGLN3Q9H6Z9 239 aa13.63□□□□□ -0.23
CACNB1-206ENST00000539338 SLC7A11Q9UPY5 501 aa13.63□□□□□ -0.23
CACNB1-206ENST00000539338 KIAA0100Q14667 2235 aaKnown RBP13.63□□□□□ -0.23
CACNB1-206ENST00000539338 A0A1W2PQ09 198 aa13.62□□□□□ -0.23
CACNB1-206ENST00000539338 ZNF850A8MQ14 1090 aa13.62□□□□□ -0.23
CACNB1-206ENST00000539338 ACSM3Q53FZ2 586 aa13.62□□□□□ -0.23
CACNB1-206ENST00000539338 RLN3Q8WXF3 142 aa13.62□□□□□ -0.23
CACNB1-206ENST00000539338 TMEM121BQ9BXQ6 578 aaPredicted RBP13.62□□□□□ -0.23
CACNB1-206ENST00000539338 HOXD1Q9GZZ0 328 aa13.62□□□□□ -0.23
CACNB1-206ENST00000539338 IL37Q9NZH6 218 aa13.62□□□□□ -0.23
CACNB1-206ENST00000539338 ARAP2Q8WZ64 1704 aa13.62□□□□□ -0.23
CACNB1-206ENST00000539338 DCDC2BA2VCK2 349 aa13.62□□□□□ -0.23
CACNB1-206ENST00000539338 H7C2Y5 167 aa13.62□□□□□ -0.23
CACNB1-206ENST00000539338 IGFBP6P24592 240 aaPredicted RBP13.62□□□□□ -0.23
CACNB1-206ENST00000539338 PRKXP51817 358 aa13.62□□□□□ -0.23
CACNB1-206ENST00000539338 CAPZA1P52907 286 aa13.62□□□□□ -0.23
CACNB1-206ENST00000539338 PRPS1P60891 318 aa13.62□□□□□ -0.23
CACNB1-206ENST00000539338 ZNF91Q05481 1191 aa13.62□□□□□ -0.23
CACNB1-206ENST00000539338 SQSTM1Q13501 440 aa13.62□□□□□ -0.23
CACNB1-206ENST00000539338 OR52R1Q8NGF1 315 aa13.62□□□□□ -0.23
CACNB1-206ENST00000539338 NUDT8Q8WV74 236 aa13.62□□□□□ -0.23
CACNB1-206ENST00000539338 ERVK-19Q9WJR5 959 aa13.62□□□□□ -0.23
CACNB1-206ENST00000539338 CACNG2Q9Y698 323 aa13.62□□□□□ -0.23
CACNB1-206ENST00000539338 MARF1Q9Y4F3 1742 aaKnown RBP13.62□□□□□ -0.23
CACNB1-206ENST00000539338 TUBGCP6Q96RT7 1819 aa13.62□□□□□ -0.23
CACNB1-206ENST00000539338 LOC105369274A0A096LPK9 316 aa13.62□□□□□ -0.23
CACNB1-206ENST00000539338 H7C417 338 aa13.62□□□□□ -0.23
CACNB1-206ENST00000539338 GOSR2O14653 212 aa13.62□□□□□ -0.23
CACNB1-206ENST00000539338 ARAFP10398 606 aa13.62□□□□□ -0.23
CACNB1-206ENST00000539338 MAOBP27338 520 aa13.62□□□□□ -0.23
CACNB1-206ENST00000539338 ARNTP27540 789 aa13.62□□□□□ -0.23
CACNB1-206ENST00000539338 LHX8Q68G74 356 aa13.62□□□□□ -0.23
CACNB1-206ENST00000539338 OR4N4Q8N0Y3 316 aa13.62□□□□□ -0.23
CACNB1-206ENST00000539338 TMEM163Q8TC26 289 aa13.62□□□□□ -0.23
CACNB1-206ENST00000539338 C4orf36Q96KX1 117 aa13.62□□□□□ -0.23
CACNB1-206ENST00000539338 TREX2Q9BQ50 279 aaPredicted RBP13.62□□□□□ -0.23
CACNB1-206ENST00000539338 THAP7Q9BT49 309 aaPredicted RBP13.62□□□□□ -0.23
CACNB1-206ENST00000539338 TUBB1Q9H4B7 451 aa13.62□□□□□ -0.23
CACNB1-206ENST00000539338 CCL26Q9Y258 94 aa13.62□□□□□ -0.23
CACNB1-206ENST00000539338 ZNF705EA8MWA4 302 aaPredicted RBP13.62□□□□□ -0.23
CACNB1-206ENST00000539338 CTHP32929 405 aa13.62□□□□□ -0.23
CACNB1-206ENST00000539338 CAV3P56539 151 aa13.62□□□□□ -0.23
CACNB1-206ENST00000539338 CDK10Q15131 360 aa13.62□□□□□ -0.23
CACNB1-206ENST00000539338 PLEKHN1Q494U1 663 aaPredicted RBP13.62□□□□□ -0.23
CACNB1-206ENST00000539338 GARNL3Q5VVW2 1013 aa13.62□□□□□ -0.23
CACNB1-206ENST00000539338 HMBOX1Q6NT76 420 aa13.62□□□□□ -0.23
CACNB1-206ENST00000539338 METTL4Q8N3J2 472 aa13.62□□□□□ -0.23
CACNB1-206ENST00000539338 TSNAXQ99598 290 aaKnown RBP13.62□□□□□ -0.23
CACNB1-206ENST00000539338 H3BML4 177 aa13.61□□□□□ -0.23
CACNB1-206ENST00000539338 CD34P28906 385 aa13.61□□□□□ -0.23
CACNB1-206ENST00000539338 GGTA1PQ4G0N0 100 aa13.61□□□□□ -0.23
CACNB1-206ENST00000539338 AWAT2Q6E213 333 aa13.61□□□□□ -0.23
CACNB1-206ENST00000539338 FIP1L1Q6UN15 594 aaKnown RBP13.61□□□□□ -0.23
CACNB1-206ENST00000539338 SLC7A5P1Q8MH63 180 aa13.61□□□□□ -0.23
CACNB1-206ENST00000539338 HOXB13Q92826 284 aaPredicted RBP13.61□□□□□ -0.23
CACNB1-206ENST00000539338 ISL2Q96A47 359 aa13.61□□□□□ -0.23
CACNB1-206ENST00000539338 QRSL1Q9H0R6 528 aaKnown RBP13.61□□□□□ -0.23
CACNB1-206ENST00000539338 LAMB1P07942 1786 aa13.61□□□□□ -0.23
CACNB1-206ENST00000539338 LOC102723532A0A0G2JNH3 316 aa13.61□□□□□ -0.23
CACNB1-206ENST00000539338 TVP23AA6NH52 213 aa13.61□□□□□ -0.23
CACNB1-206ENST00000539338 HMX3A6NHT5 357 aa13.61□□□□□ -0.23
CACNB1-206ENST00000539338 SLC2A5P22732 501 aa13.61□□□□□ -0.23
CACNB1-206ENST00000539338 ZNF611Q8N823 705 aa13.61□□□□□ -0.23
CACNB1-206ENST00000539338 C1QTNF2Q9BXJ5 285 aa13.61□□□□□ -0.23
CACNB1-206ENST00000539338 TEX10Q9NXF1 929 aaPredicted RBP13.61□□□□□ -0.23
CACNB1-206ENST00000539338 TAS2R16Q9NYV7 291 aa13.61□□□□□ -0.23
CACNB1-206ENST00000539338 DNMT3BQ9UBC3 853 aaKnown RBP13.61□□□□□ -0.23
CACNB1-206ENST00000539338 A0A0J9YY10 115 aa13.61□□□□□ -0.23
CACNB1-206ENST00000539338 C2CD4DB7Z1M9 353 aa13.61□□□□□ -0.23
CACNB1-206ENST00000539338 P04436 131 aa13.61□□□□□ -0.23
CACNB1-206ENST00000539338 CD27P26842 260 aa13.61□□□□□ -0.23
CACNB1-206ENST00000539338 TAP2Q03519 686 aa13.61□□□□□ -0.23
CACNB1-206ENST00000539338 KIR2DS3Q14952 304 aa13.61□□□□□ -0.23
CACNB1-206ENST00000539338 BCL7AQ4VC05 210 aa13.61□□□□□ -0.23
CACNB1-206ENST00000539338 ATAD3CQ5T2N8 411 aa13.61□□□□□ -0.23
CACNB1-206ENST00000539338 EEF1A1P5Q5VTE0 462 aa13.61□□□□□ -0.23
CACNB1-206ENST00000539338 LAS2Q8IYD9 372 aa13.61□□□□□ -0.23
CACNB1-206ENST00000539338 ZNF740Q8NDX6 193 aa13.61□□□□□ -0.23
CACNB1-206ENST00000539338 OR8J2Q8NGG1 315 aa13.61□□□□□ -0.23
CACNB1-206ENST00000539338 TAS2R8Q9NYW2 309 aa13.61□□□□□ -0.23
CACNB1-206ENST00000539338 MEIS3P1A6NDR6 274 aa13.61□□□□□ -0.23
CACNB1-206ENST00000539338 EIF2DP41214 584 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms