RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 ONECUT2O95948 504 aa8.19□□□□□ -1.1
DDB1-213ENST00000539332 CD36P16671 472 aa8.19□□□□□ -1.1
DDB1-213ENST00000539332 AGXTP21549 392 aa8.19□□□□□ -1.1
DDB1-213ENST00000539332 NR4A1P22736 598 aa8.19□□□□□ -1.1
DDB1-213ENST00000539332 PRKAR1BP31321 381 aa8.19□□□□□ -1.1
DDB1-213ENST00000539332 RORAP35398 523 aa8.19□□□□□ -1.1
DDB1-213ENST00000539332 DDOSTP39656 456 aa8.19□□□□□ -1.1
DDB1-213ENST00000539332 DAPP51397 102 aa8.19□□□□□ -1.1
DDB1-213ENST00000539332 BTG2P78543 158 aa8.19□□□□□ -1.1
DDB1-213ENST00000539332 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.19□□□□□ -1.1
DDB1-213ENST00000539332 SLC13A2Q13183 592 aa8.19□□□□□ -1.1
DDB1-213ENST00000539332 EXOSC7Q15024 291 aaKnown RBP8.19□□□□□ -1.1
DDB1-213ENST00000539332 ZFP69Q49AA0 526 aa8.19□□□□□ -1.1
DDB1-213ENST00000539332 GPAT3Q53EU6 434 aa8.19□□□□□ -1.1
DDB1-213ENST00000539332 TMEM236Q5W0B7 351 aa8.19□□□□□ -1.1
DDB1-213ENST00000539332 ANKRD34AQ69YU3 496 aa8.19□□□□□ -1.1
DDB1-213ENST00000539332 TYW3Q6IPR3 259 aaKnown RBP8.19□□□□□ -1.1
DDB1-213ENST00000539332 RAB11FIP2Q7L804 512 aa8.19□□□□□ -1.1
DDB1-213ENST00000539332 C16orf62Q7Z3J2 963 aa8.19□□□□□ -1.1
DDB1-213ENST00000539332 TSPYL5Q86VY4 417 aaPredicted RBP8.19□□□□□ -1.1
DDB1-213ENST00000539332 CYP4Z1Q86W10 505 aa8.19□□□□□ -1.1
DDB1-213ENST00000539332 GALNT12Q8IXK2 581 aa8.19□□□□□ -1.1
DDB1-213ENST00000539332 PEX5LQ8IYB4 626 aa8.19□□□□□ -1.1
DDB1-213ENST00000539332 C7orf57Q8NEG2 295 aa8.19□□□□□ -1.1
DDB1-213ENST00000539332 OR4D11Q8NGI4 311 aa8.19□□□□□ -1.1
DDB1-213ENST00000539332 PMEPA1Q969W9 287 aa8.19□□□□□ -1.1
DDB1-213ENST00000539332 CLIP3Q96DZ5 547 aa8.19□□□□□ -1.1
DDB1-213ENST00000539332 SDF2Q99470 211 aa8.19□□□□□ -1.1
DDB1-213ENST00000539332 ARHGDIGQ99819 225 aa8.19□□□□□ -1.1
DDB1-213ENST00000539332 SLC7A5P2Q9GIP4 190 aa8.19□□□□□ -1.1
DDB1-213ENST00000539332 ZNF304Q9HCX3 659 aa8.19□□□□□ -1.1
DDB1-213ENST00000539332 POLE3Q9NRF9 147 aa8.19□□□□□ -1.1
DDB1-213ENST00000539332 SLC39A1Q9NY26 324 aa8.19□□□□□ -1.1
DDB1-213ENST00000539332 ERVK-18Q9QC07 812 aa8.19□□□□□ -1.1
DDB1-213ENST00000539332 CHST2Q9Y4C5 530 aa8.19□□□□□ -1.1
DDB1-213ENST00000539332 LOXL2Q9Y4K0 774 aa8.19□□□□□ -1.1
DDB1-213ENST00000539332 PMS2P1A4D2B8 440 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 SYNDIG1LA6NDD5 238 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 J3KTA2 159 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 FFAR1O14842 300 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 TBX1O43435 398 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 AIREO43918 545 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 KIAA0513O60268 411 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 OR10H2O60403 315 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 GFRA3O60609 400 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 FAM20BO75063 409 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 NME6O75414 186 aaPredicted RBP8.18□□□□□ -1.1
DDB1-213ENST00000539332 CLPSP04118 112 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 ALPPP05187 535 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 THBS1P07996 1170 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 HBQ1P09105 142 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 CEACAM1P13688 526 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 FBLP22087 321 aaKnown RBP8.18□□□□□ -1.1
DDB1-213ENST00000539332 PRKACGP22612 351 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 SOX6P35712 828 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 NR4A2P43354 598 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 EMDP50402 254 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 NCS1P62166 190 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 SPIBQ01892 262 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 RHAGQ02094 409 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 TEKQ02763 1124 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 C19orf57Q0VDD7 668 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 CDK10Q15131 360 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 CYP27C1Q4G0S4 372 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 SPANXN2Q5MJ10 180 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 DESI1Q6ICB0 168 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 TCTN3Q6NUS6 607 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 COX15Q7KZN9 410 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 OLIG3Q7RTU3 272 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 WDR53Q7Z5U6 358 aaPredicted RBP8.18□□□□□ -1.1
DDB1-213ENST00000539332 ZNF540Q8NDQ6 660 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 SGCDQ92629 289 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 RIT1Q92963 219 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 TP53INP1Q96A56 240 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 VSTM2LQ96N03 204 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 DGAT2Q96PD7 388 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 WFDC6Q9BQY6 131 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 GABARAPL3Q9BY60 117 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 MTHFD2LQ9H903 347 aaPredicted RBP8.18□□□□□ -1.1
DDB1-213ENST00000539332 FOLH1BQ9HBA9 442 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 ADAP2Q9NPF8 381 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 POLE4Q9NR33 117 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 DCAF16Q9NXF7 216 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 QPCTLQ9NXS2 382 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 TRAPPC4Q9Y296 219 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 SLC9A8Q9Y2E8 581 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 CAB39Q9Y376 341 aaPredicted RBP8.18□□□□□ -1.1
DDB1-213ENST00000539332 FREM2Q5SZK8 3169 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 AKAP13Q12802 2813 aa8.18□□□□□ -1.1
DDB1-213ENST00000539332 IGLV3-12A0A075B6K2 115 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 CCDC187A0A096LP49 1063 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 A0A1W2PNU3 283 aaPredicted RBP8.17□□□□□ -1.1
DDB1-213ENST00000539332 TNFRSF11BO00300 401 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 PLD2O14939 933 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 CPNE3O75131 537 aaKnown RBP8.17□□□□□ -1.1
DDB1-213ENST00000539332 CDC123O75794 336 aaPredicted RBP8.17□□□□□ -1.1
DDB1-213ENST00000539332 ZNF28P17035 718 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 MAOAP21397 527 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 CBLP22681 906 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 ETV5P41161 510 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms