RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 LCA5Q86VQ0 697 aa2.46□□□□□ -2.02
CCDC7-209ENST00000539197 FAM71E2Q8N5Q1 922 aa2.46□□□□□ -2.02
CCDC7-209ENST00000539197 OR52E1Q8NGJ3 308 aa2.46□□□□□ -2.02
CCDC7-209ENST00000539197 DNAJA4Q8WW22 397 aaPredicted RBP2.46□□□□□ -2.02
CCDC7-209ENST00000539197 NCLNQ969V3 563 aa2.46□□□□□ -2.02
CCDC7-209ENST00000539197 ATP6V0BQ99437 205 aa2.46□□□□□ -2.02
CCDC7-209ENST00000539197 TXN2Q99757 166 aa2.46□□□□□ -2.02
CCDC7-209ENST00000539197 CRNKL1Q9BZJ0 848 aaKnown RBP2.46□□□□□ -2.02
CCDC7-209ENST00000539197 XPO4Q9C0E2 1151 aaKnown RBP2.46□□□□□ -2.02
CCDC7-209ENST00000539197 ALDH8A1Q9H2A2 487 aaPredicted RBP2.46□□□□□ -2.02
CCDC7-209ENST00000539197 THAP9Q9H5L6 903 aa2.46□□□□□ -2.02
CCDC7-209ENST00000539197 ZDHHC11Q9H8X9 412 aa2.46□□□□□ -2.02
CCDC7-209ENST00000539197 NANSQ9NR45 359 aa2.46□□□□□ -2.02
CCDC7-209ENST00000539197 ANKMY1Q9P2S6 941 aa2.46□□□□□ -2.02
CCDC7-209ENST00000539197 UBQLN1Q9UMX0 589 aaKnown RBP2.46□□□□□ -2.02
CCDC7-209ENST00000539197 METP08581 1390 aa2.46□□□□□ -2.02
CCDC7-209ENST00000539197 ADAM12O43184 909 aa2.45□□□□□ -2.02
CCDC7-209ENST00000539197 KLF8O95600 359 aaPredicted RBP2.45□□□□□ -2.02
CCDC7-209ENST00000539197 SERPINA2P20848 420 aa2.45□□□□□ -2.02
CCDC7-209ENST00000539197 LONP1P36776 959 aaKnown RBP2.45□□□□□ -2.02
CCDC7-209ENST00000539197 STARP49675 285 aa2.45□□□□□ -2.02
CCDC7-209ENST00000539197 SLC26A5P58743 744 aa2.45□□□□□ -2.02
CCDC7-209ENST00000539197 SLC10A7Q0GE19 358 aa2.45□□□□□ -2.02
CCDC7-209ENST00000539197 ARFRP1Q13795 201 aa2.45□□□□□ -2.02
CCDC7-209ENST00000539197 EXOSC2Q13868 293 aaKnown RBP2.45□□□□□ -2.02
CCDC7-209ENST00000539197 CDKN3Q16667 212 aa2.45□□□□□ -2.02
CCDC7-209ENST00000539197 C1QTNF12Q5T7M4 302 aa2.45□□□□□ -2.02
CCDC7-209ENST00000539197 PVRIGQ6DKI7 326 aa2.45□□□□□ -2.02
CCDC7-209ENST00000539197 EFCAB13Q8IY85 973 aa2.45□□□□□ -2.02
CCDC7-209ENST00000539197 POLR3FQ9H1D9 316 aaPredicted RBP2.45□□□□□ -2.02
CCDC7-209ENST00000539197 SLC25A51Q9H1U9 297 aa2.45□□□□□ -2.02
CCDC7-209ENST00000539197 PPDPFQ9H3Y8 114 aa2.45□□□□□ -2.02
CCDC7-209ENST00000539197 LPAR2Q9HBW0 351 aa2.45□□□□□ -2.02
CCDC7-209ENST00000539197 WFDC1Q9HC57 220 aa2.45□□□□□ -2.02
CCDC7-209ENST00000539197 SH2D2AQ9NP31 389 aa2.45□□□□□ -2.02
CCDC7-209ENST00000539197 IL19Q9UHD0 177 aa2.45□□□□□ -2.02
CCDC7-209ENST00000539197 PLLPQ9Y342 182 aa2.45□□□□□ -2.02
CCDC7-209ENST00000539197 NKX2-6A6NCS4 301 aa2.44□□□□□ -2.02
CCDC7-209ENST00000539197 LRRC30A6NM36 301 aa2.44□□□□□ -2.02
CCDC7-209ENST00000539197 WASH3PC4AMC7 463 aa2.44□□□□□ -2.02
CCDC7-209ENST00000539197 PCCAP05165 728 aaPredicted RBP2.44□□□□□ -2.02
CCDC7-209ENST00000539197 ZCCHC18P0CG32 403 aa2.44□□□□□ -2.02
CCDC7-209ENST00000539197 GCFC2P16383 781 aaKnown RBP2.44□□□□□ -2.02
CCDC7-209ENST00000539197 CSNK1DP48730 415 aa2.44□□□□□ -2.02
CCDC7-209ENST00000539197 LHX2P50458 406 aa2.44□□□□□ -2.02
CCDC7-209ENST00000539197 LIM2P55344 173 aa2.44□□□□□ -2.02
CCDC7-209ENST00000539197 NTHL1P78549 312 aa2.44□□□□□ -2.02
CCDC7-209ENST00000539197 RGS1Q08116 209 aa2.44□□□□□ -2.02
CCDC7-209ENST00000539197 PDIA5Q14554 519 aa2.44□□□□□ -2.02
CCDC7-209ENST00000539197 WDR74Q6RFH5 385 aaPredicted RBP2.44□□□□□ -2.02
CCDC7-209ENST00000539197 WASH2PQ6VEQ5 465 aa2.44□□□□□ -2.02
CCDC7-209ENST00000539197 TMEM184AQ6ZMB5 413 aa2.44□□□□□ -2.02
CCDC7-209ENST00000539197 NRMQ8IXM6 262 aa2.44□□□□□ -2.02
CCDC7-209ENST00000539197 DQX1Q8TE96 717 aaKnown RBP2.44□□□□□ -2.02
CCDC7-209ENST00000539197 GIPC3Q8TF64 312 aa2.44□□□□□ -2.02
CCDC7-209ENST00000539197 SLC13A3Q8WWT9 602 aa2.44□□□□□ -2.02
CCDC7-209ENST00000539197 ZNF670Q9BS34 389 aa2.44□□□□□ -2.02
CCDC7-209ENST00000539197 TMEM121Q9BTD3 319 aa2.44□□□□□ -2.02
CCDC7-209ENST00000539197 PAK1IP1Q9NWT1 392 aaPredicted RBP2.44□□□□□ -2.02
CCDC7-209ENST00000539197 UTP6Q9NYH9 597 aaKnown RBP2.44□□□□□ -2.02
CCDC7-209ENST00000539197 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.44□□□□□ -2.02
CCDC7-209ENST00000539197 CNOT2Q9NZN8 540 aaKnown RBP2.44□□□□□ -2.02
CCDC7-209ENST00000539197 FETUBQ9UGM5 382 aa2.44□□□□□ -2.02
CCDC7-209ENST00000539197 BTNL2Q9UIR0 455 aa2.44□□□□□ -2.02
CCDC7-209ENST00000539197 CCDC7Q96M83 1385 aa2.44□□□□□ -2.02
CCDC7-209ENST00000539197 THSD7BQ9C0I4 1608 aa2.43□□□□□ -2.02
CCDC7-209ENST00000539197 KIR2DS1A0A191URI9 304 aa2.43□□□□□ -2.02
CCDC7-209ENST00000539197 EFNA2O43921 213 aa2.43□□□□□ -2.02
CCDC7-209ENST00000539197 AKR7A3O95154 331 aa2.43□□□□□ -2.02
CCDC7-209ENST00000539197 MT-ATP6P00846 226 aa2.43□□□□□ -2.02
CCDC7-209ENST00000539197 CSF2P04141 144 aa2.43□□□□□ -2.02
CCDC7-209ENST00000539197 RRASP10301 218 aa2.43□□□□□ -2.02
CCDC7-209ENST00000539197 KRTAP12-3P60328 96 aa2.43□□□□□ -2.02
CCDC7-209ENST00000539197 GGTLC2Q14390 218 aa2.43□□□□□ -2.02
CCDC7-209ENST00000539197 KIR2DS1Q14954 304 aa2.43□□□□□ -2.02
CCDC7-209ENST00000539197 NSDHLQ15738 373 aa2.43□□□□□ -2.02
CCDC7-209ENST00000539197 RNF165Q6ZSG1 346 aa2.43□□□□□ -2.02
CCDC7-209ENST00000539197 RABEPKQ7Z6M1 372 aa2.43□□□□□ -2.02
CCDC7-209ENST00000539197 LRP11Q86VZ4 500 aa2.43□□□□□ -2.02
CCDC7-209ENST00000539197 C17orf82Q86X59 251 aaPredicted RBP2.43□□□□□ -2.02
CCDC7-209ENST00000539197 SNX32Q86XE0 403 aa2.43□□□□□ -2.02
CCDC7-209ENST00000539197 ZNF740Q8NDX6 193 aa2.43□□□□□ -2.02
CCDC7-209ENST00000539197 OR1E3Q8WZA6 343 aa2.43□□□□□ -2.02
CCDC7-209ENST00000539197 MS4A14Q96JA4 679 aa2.43□□□□□ -2.02
CCDC7-209ENST00000539197 CHIAQ9BZP6 476 aa2.43□□□□□ -2.02
CCDC7-209ENST00000539197 POLR2J2Q9GZM3 115 aaKnown RBP2.43□□□□□ -2.02
CCDC7-209ENST00000539197 POLR2J3Q9H1A7 115 aaKnown RBP2.43□□□□□ -2.02
CCDC7-209ENST00000539197 GPN2Q9H9Y4 310 aaPredicted RBP2.43□□□□□ -2.02
CCDC7-209ENST00000539197 ANO10Q9NW15 660 aa2.43□□□□□ -2.02
CCDC7-209ENST00000539197 RDH8Q9NYR8 311 aa2.43□□□□□ -2.02
CCDC7-209ENST00000539197 ATP6V1HQ9UI12 483 aa2.43□□□□□ -2.02
CCDC7-209ENST00000539197 CYTH4Q9UIA0 394 aa2.43□□□□□ -2.02
CCDC7-209ENST00000539197 PRPF19Q9UMS4 504 aaKnown RBP2.43□□□□□ -2.02
CCDC7-209ENST00000539197 NUDCQ9Y266 331 aa2.43□□□□□ -2.02
CCDC7-209ENST00000539197 AP4B1Q9Y6B7 739 aa2.43□□□□□ -2.02
CCDC7-209ENST00000539197 LOC100131303A0A0U1RQF7 123 aa2.42□□□□□ -2.02
CCDC7-209ENST00000539197 HELTA6NFD8 242 aa2.42□□□□□ -2.02
CCDC7-209ENST00000539197 OR6C65A6NJZ3 312 aa2.42□□□□□ -2.02
CCDC7-209ENST00000539197 FAM74A7A6NL05 159 aa2.42□□□□□ -2.02
CCDC7-209ENST00000539197 A8MUA0 341 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms