RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 CTSFQ9UBX1 484 aa18.8■□□□□ 0.6
DDX55-205ENST00000538744 RARRES3Q9UL19 164 aa18.8■□□□□ 0.6
DDX55-205ENST00000538744 ADAM11O75078 769 aa18.79■□□□□ 0.6
DDX55-205ENST00000538744 MAKP20794 623 aa18.79■□□□□ 0.6
DDX55-205ENST00000538744 CSTF2P33240 577 aaKnown RBP eCLIP18.79■□□□□ 0.6
DDX55-205ENST00000538744 LIPAP38571 399 aa18.79■□□□□ 0.6
DDX55-205ENST00000538744 CTBP2P56545 445 aa18.79■□□□□ 0.6
DDX55-205ENST00000538744 KLHL26Q53HC5 615 aa18.79■□□□□ 0.6
DDX55-205ENST00000538744 ALG10BQ5I7T1 473 aa18.79■□□□□ 0.6
DDX55-205ENST00000538744 DTWD2Q8NBA8 298 aa18.79■□□□□ 0.6
DDX55-205ENST00000538744 OR2T33Q8NG76 320 aa18.79■□□□□ 0.6
DDX55-205ENST00000538744 FANK1Q8TC84 345 aa18.79■□□□□ 0.6
DDX55-205ENST00000538744 IFI44Q8TCB0 444 aa18.79■□□□□ 0.6
DDX55-205ENST00000538744 ADIPOR1Q96A54 375 aa18.79■□□□□ 0.6
DDX55-205ENST00000538744 BPIFA2Q96DR5 249 aa18.79■□□□□ 0.6
DDX55-205ENST00000538744 PLEKHA8Q96JA3 519 aa18.79■□□□□ 0.6
DDX55-205ENST00000538744 LMF1Q96S06 567 aa18.79■□□□□ 0.6
DDX55-205ENST00000538744 UBQLN4Q9NRR5 601 aa18.79■□□□□ 0.6
DDX55-205ENST00000538744 C20orf141Q9NUB4 165 aa18.79■□□□□ 0.6
DDX55-205ENST00000538744 MED17Q9NVC6 651 aa18.79■□□□□ 0.6
DDX55-205ENST00000538744 TAS2R16Q9NYV7 291 aa18.79■□□□□ 0.6
DDX55-205ENST00000538744 COPS7AQ9UBW8 275 aa18.79■□□□□ 0.6
DDX55-205ENST00000538744 KPNA4O00629 521 aaPredicted RBP18.78■□□□□ 0.6
DDX55-205ENST00000538744 ARHGAP33O14559 1287 aa18.78■□□□□ 0.6
DDX55-205ENST00000538744 PRODHO43272 600 aa18.78■□□□□ 0.6
DDX55-205ENST00000538744 HMGN1P05114 100 aa18.78■□□□□ 0.6
DDX55-205ENST00000538744 ADRA2AP08913 450 aa18.78■□□□□ 0.6
DDX55-205ENST00000538744 DAB2P98082 770 aa18.78■□□□□ 0.6
DDX55-205ENST00000538744 TRIM61Q5EBN2 209 aa18.78■□□□□ 0.6
DDX55-205ENST00000538744 RPL13AP3Q6NVV1 102 aa18.78■□□□□ 0.6
DDX55-205ENST00000538744 ULK3Q6PHR2 472 aa18.78■□□□□ 0.6
DDX55-205ENST00000538744 LAPTM4BQ86VI4 370 aa18.78■□□□□ 0.6
DDX55-205ENST00000538744 TMEM105Q8N8V8 129 aa18.78■□□□□ 0.6
DDX55-205ENST00000538744 SAMD8Q96LT4 415 aa18.78■□□□□ 0.6
DDX55-205ENST00000538744 ZNF426Q9BUY5 554 aa18.78■□□□□ 0.6
DDX55-205ENST00000538744 SLC22A11Q9NSA0 550 aa18.78■□□□□ 0.6
DDX55-205ENST00000538744 LAMA1P25391 3075 aa18.78■□□□□ 0.6
DDX55-205ENST00000538744 C2orf92A0A1B0GVN3 265 aa18.77■□□□□ 0.6
DDX55-205ENST00000538744 IRGMA1A4Y4 181 aa18.77■□□□□ 0.6
DDX55-205ENST00000538744 KDM4EB2RXH2 506 aaPredicted RBP18.77■□□□□ 0.6
DDX55-205ENST00000538744 SURF4O15260 269 aa18.77■□□□□ 0.6
DDX55-205ENST00000538744 PRKNO60260 465 aaPredicted RBP18.77■□□□□ 0.6
DDX55-205ENST00000538744 CKMT1AP12532 417 aa18.77■□□□□ 0.6
DDX55-205ENST00000538744 HPGDP15428 266 aa18.77■□□□□ 0.6
DDX55-205ENST00000538744 ADH7P40394 386 aa18.77■□□□□ 0.6
DDX55-205ENST00000538744 CLPPQ16740 277 aaPredicted RBP18.77■□□□□ 0.6
DDX55-205ENST00000538744 TMEM44Q2T9K0 475 aa18.77■□□□□ 0.6
DDX55-205ENST00000538744 RNLSQ5VYX0 342 aa18.77■□□□□ 0.6
DDX55-205ENST00000538744 HLA-DQA1Q5Y7H0 255 aa18.77■□□□□ 0.6
DDX55-205ENST00000538744 SLC23A3Q6PIS1 610 aa18.77■□□□□ 0.6
DDX55-205ENST00000538744 BMP8AQ7Z5Y6 402 aa18.77■□□□□ 0.6
DDX55-205ENST00000538744 CADM2Q8N3J6 435 aa18.77■□□□□ 0.6
DDX55-205ENST00000538744 OR52L1Q8NGH7 329 aa18.77■□□□□ 0.6
DDX55-205ENST00000538744 GAL3ST4Q96RP7 486 aa18.77■□□□□ 0.6
DDX55-205ENST00000538744 OR52D1Q9H346 318 aa18.77■□□□□ 0.6
DDX55-205ENST00000538744 ATP13A2Q9NQ11 1180 aa18.77■□□□□ 0.6
DDX55-205ENST00000538744 IGLV3-12A0A075B6K2 115 aa18.77■□□□□ 0.59
DDX55-205ENST00000538744 TMEM221A6NGB7 291 aa18.77■□□□□ 0.59
DDX55-205ENST00000538744 M0R296 226 aa18.77■□□□□ 0.59
DDX55-205ENST00000538744 SCRG1O75711 98 aa18.77■□□□□ 0.59
DDX55-205ENST00000538744 RCBTB2O95199 551 aa18.77■□□□□ 0.59
DDX55-205ENST00000538744 SYPP08247 313 aa18.77■□□□□ 0.59
DDX55-205ENST00000538744 CDK4P11802 303 aa18.77■□□□□ 0.59
DDX55-205ENST00000538744 DUSP3P51452 185 aaPredicted RBP18.77■□□□□ 0.59
DDX55-205ENST00000538744 EBPQ15125 230 aaKnown RBP18.77■□□□□ 0.59
DDX55-205ENST00000538744 NDUFAF6Q330K2 333 aa18.77■□□□□ 0.59
DDX55-205ENST00000538744 KLHL22Q53GT1 634 aa18.77■□□□□ 0.59
DDX55-205ENST00000538744 ARMCX4Q5H9R4 360 aa18.77■□□□□ 0.59
DDX55-205ENST00000538744 KIRREL2Q6UWL6 708 aa18.77■□□□□ 0.59
DDX55-205ENST00000538744 SLC46A3Q7Z3Q1 461 aa18.77■□□□□ 0.59
DDX55-205ENST00000538744 ANKK1Q8NFD2 765 aa18.77■□□□□ 0.59
DDX55-205ENST00000538744 OR1N1Q8NGS0 311 aa18.77■□□□□ 0.59
DDX55-205ENST00000538744 STT3BQ8TCJ2 826 aa18.77■□□□□ 0.59
DDX55-205ENST00000538744 HHATLQ9HCP6 504 aa18.77■□□□□ 0.59
DDX55-205ENST00000538744 MEPEQ9NQ76 525 aaPredicted RBP18.77■□□□□ 0.59
DDX55-205ENST00000538744 ERGIC3Q9Y282 383 aa18.77■□□□□ 0.59
DDX55-205ENST00000538744 GPR52Q9Y2T5 361 aa18.77■□□□□ 0.59
DDX55-205ENST00000538744 OR6C76A6NM76 312 aa18.76■□□□□ 0.59
DDX55-205ENST00000538744 EFCAB9A8MZ26 197 aa18.76■□□□□ 0.59
DDX55-205ENST00000538744 SCDO00767 359 aa18.76■□□□□ 0.59
DDX55-205ENST00000538744 UTS2O95399 124 aa18.76■□□□□ 0.59
DDX55-205ENST00000538744 RAB36O95755 333 aa18.76■□□□□ 0.59
DDX55-205ENST00000538744 CH25HO95992 272 aa18.76■□□□□ 0.59
DDX55-205ENST00000538744 LCN1P31025 176 aa18.76■□□□□ 0.59
DDX55-205ENST00000538744 MLLT10P55197 1068 aa18.76■□□□□ 0.59
DDX55-205ENST00000538744 COPZ1P61923 177 aa18.76■□□□□ 0.59
DDX55-205ENST00000538744 MED22Q15528 200 aa18.76■□□□□ 0.59
DDX55-205ENST00000538744 NKAIN1Q4KMZ8 207 aa18.76■□□□□ 0.59
DDX55-205ENST00000538744 FNDC7Q5VTL7 733 aa18.76■□□□□ 0.59
DDX55-205ENST00000538744 HSDL2Q6YN16 418 aa18.76■□□□□ 0.59
DDX55-205ENST00000538744 SLC29A4Q7RTT9 530 aa18.76■□□□□ 0.59
DDX55-205ENST00000538744 C9orf40Q8IXQ3 194 aa18.76■□□□□ 0.59
DDX55-205ENST00000538744 FAM71CQ8NEG0 241 aa18.76■□□□□ 0.59
DDX55-205ENST00000538744 RNF31Q96EP0 1072 aa18.76■□□□□ 0.59
DDX55-205ENST00000538744 UBQLN3Q9H347 655 aa18.76■□□□□ 0.59
DDX55-205ENST00000538744 MRPS18AQ9NVS2 196 aaKnown RBP18.76■□□□□ 0.59
DDX55-205ENST00000538744 DIMT1Q9UNQ2 313 aaKnown RBP18.76■□□□□ 0.59
DDX55-205ENST00000538744 USP34Q70CQ2 3546 aa18.76■□□□□ 0.59
DDX55-205ENST00000538744 SEC16AO15027 2179 aa18.76■□□□□ 0.59
DDX55-205ENST00000538744 AGRPO00253 132 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms