RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 OR51E2Q9H255 320 aa12.99□□□□□ -0.33
ACTN1-205ENST00000538545 OR52D1Q9H346 318 aa12.99□□□□□ -0.33
ACTN1-205ENST00000538545 RERGLQ9H628 205 aa12.99□□□□□ -0.33
ACTN1-205ENST00000538545 SEMA5BQ9P283 1151 aa12.99□□□□□ -0.33
ACTN1-205ENST00000538545 SUSD2Q9UGT4 822 aa12.99□□□□□ -0.33
ACTN1-205ENST00000538545 ENOPH1Q9UHY7 261 aa12.99□□□□□ -0.33
ACTN1-205ENST00000538545 ZNF223Q9UK11 482 aaPredicted RBP12.99□□□□□ -0.33
ACTN1-205ENST00000538545 RALGAPA1Q6GYQ0 2036 aa12.99□□□□□ -0.33
ACTN1-205ENST00000538545 LOC100506127A0A0U1RQW1 187 aa12.99□□□□□ -0.33
ACTN1-205ENST00000538545 TCRBV16S1A1N1A0A5B0 115 aa12.99□□□□□ -0.33
ACTN1-205ENST00000538545 NPIPB9F8W1W9 429 aa12.99□□□□□ -0.33
ACTN1-205ENST00000538545 KLF4O43474 513 aa12.99□□□□□ -0.33
ACTN1-205ENST00000538545 AK1P00568 194 aa12.99□□□□□ -0.33
ACTN1-205ENST00000538545 IGKV3-11P04433 115 aa12.99□□□□□ -0.33
ACTN1-205ENST00000538545 GADD45AP24522 165 aa12.99□□□□□ -0.33
ACTN1-205ENST00000538545 SOX3P41225 446 aa12.99□□□□□ -0.33
ACTN1-205ENST00000538545 ENTPD1P49961 510 aa12.99□□□□□ -0.33
ACTN1-205ENST00000538545 SMSP52788 366 aa12.99□□□□□ -0.33
ACTN1-205ENST00000538545 TMBIM6P55061 237 aa12.99□□□□□ -0.33
ACTN1-205ENST00000538545 CD300LDQ6UXZ3 194 aa12.99□□□□□ -0.33
ACTN1-205ENST00000538545 RASSF6Q6ZTQ3 369 aa12.99□□□□□ -0.33
ACTN1-205ENST00000538545 P2RY8Q86VZ1 359 aa12.99□□□□□ -0.33
ACTN1-205ENST00000538545 SVOPQ8N4V2 548 aa12.99□□□□□ -0.33
ACTN1-205ENST00000538545 SMAP2Q8WU79 429 aaPredicted RBP12.99□□□□□ -0.33
ACTN1-205ENST00000538545 RAB2BQ8WUD1 216 aa12.99□□□□□ -0.33
ACTN1-205ENST00000538545 ZBTB20Q9HC78 741 aaPredicted RBP12.99□□□□□ -0.33
ACTN1-205ENST00000538545 HHATLQ9HCP6 504 aa12.99□□□□□ -0.33
ACTN1-205ENST00000538545 SIDT1Q9NXL6 827 aaKnown RBP12.99□□□□□ -0.33
ACTN1-205ENST00000538545 A0A0B4J2E0 115 aa12.98□□□□□ -0.33
ACTN1-205ENST00000538545 A0A1B0GX12 115 aa12.98□□□□□ -0.33
ACTN1-205ENST00000538545 C2orf72A6NCS6 295 aa12.98□□□□□ -0.33
ACTN1-205ENST00000538545 KHNYNO15037 678 aaKnown RBP12.98□□□□□ -0.33
ACTN1-205ENST00000538545 ZNF354AO60765 605 aaPredicted RBP12.98□□□□□ -0.33
ACTN1-205ENST00000538545 CNOT3O75175 753 aaKnown RBP12.98□□□□□ -0.33
ACTN1-205ENST00000538545 REM1O75628 298 aa12.98□□□□□ -0.33
ACTN1-205ENST00000538545 SLC15A1P46059 708 aa12.98□□□□□ -0.33
ACTN1-205ENST00000538545 SLC9A3P48764 834 aa12.98□□□□□ -0.33
ACTN1-205ENST00000538545 CRYZQ08257 329 aaKnown RBP12.98□□□□□ -0.33
ACTN1-205ENST00000538545 TUBA3CQ13748 450 aa12.98□□□□□ -0.33
ACTN1-205ENST00000538545 FGFBP1Q14512 234 aa12.98□□□□□ -0.33
ACTN1-205ENST00000538545 TMCO5AQ8N6Q1 288 aa12.98□□□□□ -0.33
ACTN1-205ENST00000538545 BPIFA2Q96DR5 249 aa12.98□□□□□ -0.33
ACTN1-205ENST00000538545 HCAR1Q9BXC0 346 aa12.98□□□□□ -0.33
ACTN1-205ENST00000538545 TMEM27Q9HBJ8 222 aa12.98□□□□□ -0.33
ACTN1-205ENST00000538545 C2orf92A0A1B0GVN3 265 aa12.98□□□□□ -0.33
ACTN1-205ENST00000538545 ICOSLGO75144 302 aa12.98□□□□□ -0.33
ACTN1-205ENST00000538545 CCL4P13236 92 aa12.98□□□□□ -0.33
ACTN1-205ENST00000538545 ZNF28P17035 718 aa12.98□□□□□ -0.33
ACTN1-205ENST00000538545 FPR3P25089 353 aa12.98□□□□□ -0.33
ACTN1-205ENST00000538545 SNRPGP62308 76 aaKnown RBP12.98□□□□□ -0.33
ACTN1-205ENST00000538545 ARMCX4Q5H9R4 360 aa12.98□□□□□ -0.33
ACTN1-205ENST00000538545 OR2G6Q5TZ20 316 aa12.98□□□□□ -0.33
ACTN1-205ENST00000538545 PLAG1Q6DJT9 500 aa12.98□□□□□ -0.33
ACTN1-205ENST00000538545 OR5M10Q6IEU7 315 aa12.98□□□□□ -0.33
ACTN1-205ENST00000538545 QSOX2Q6ZRP7 698 aa12.98□□□□□ -0.33
ACTN1-205ENST00000538545 ANKRD13BQ86YJ7 626 aa12.98□□□□□ -0.33
ACTN1-205ENST00000538545 ADAMTS18Q8TE60 1221 aa12.98□□□□□ -0.33
ACTN1-205ENST00000538545 FGF11Q92914 225 aa12.98□□□□□ -0.33
ACTN1-205ENST00000538545 ADIPOR1Q96A54 375 aa12.98□□□□□ -0.33
ACTN1-205ENST00000538545 OR1F2PQ96R84 312 aa12.98□□□□□ -0.33
ACTN1-205ENST00000538545 FBXL4Q9UKA2 621 aa12.98□□□□□ -0.33
ACTN1-205ENST00000538545 SERINC4A6NH21 518 aa12.98□□□□□ -0.33
ACTN1-205ENST00000538545 SOCS6O14544 535 aa12.98□□□□□ -0.33
ACTN1-205ENST00000538545 CLUP10909 449 aa12.98□□□□□ -0.33
ACTN1-205ENST00000538545 EFNB1P98172 346 aa12.98□□□□□ -0.33
ACTN1-205ENST00000538545 UBE2UQ5VVX9 321 aa12.98□□□□□ -0.33
ACTN1-205ENST00000538545 NIPAL1Q6NVV3 410 aa12.98□□□□□ -0.33
ACTN1-205ENST00000538545 CYB561A3Q8NBI2 242 aa12.98□□□□□ -0.33
ACTN1-205ENST00000538545 OR4F15Q8NGB8 312 aa12.98□□□□□ -0.33
ACTN1-205ENST00000538545 MVB12AQ96EY5 273 aa12.98□□□□□ -0.33
ACTN1-205ENST00000538545 POLDIP3Q9BY77 421 aaKnown RBP12.98□□□□□ -0.33
ACTN1-205ENST00000538545 ARRDC1-AS1Q9H2J1 176 aa12.98□□□□□ -0.33
ACTN1-205ENST00000538545 IL20Q9NYY1 176 aa12.98□□□□□ -0.33
ACTN1-205ENST00000538545 TESQ9UGI8 421 aaKnown RBP12.98□□□□□ -0.33
ACTN1-205ENST00000538545 TMEM221A6NGB7 291 aa12.97□□□□□ -0.33
ACTN1-205ENST00000538545 IDSB3KWA1 339 aa12.97□□□□□ -0.33
ACTN1-205ENST00000538545 M0R296 226 aa12.97□□□□□ -0.33
ACTN1-205ENST00000538545 IMPA2O14732 288 aa12.97□□□□□ -0.33
ACTN1-205ENST00000538545 HPGDP15428 266 aa12.97□□□□□ -0.33
ACTN1-205ENST00000538545 GSTM3P21266 225 aa12.97□□□□□ -0.33
ACTN1-205ENST00000538545 IFNGR2P38484 337 aa12.97□□□□□ -0.33
ACTN1-205ENST00000538545 EBPQ15125 230 aaKnown RBP12.97□□□□□ -0.33
ACTN1-205ENST00000538545 TBCEQ15813 527 aaPredicted RBP12.97□□□□□ -0.33
ACTN1-205ENST00000538545 NKAIN1Q4KMZ8 207 aa12.97□□□□□ -0.33
ACTN1-205ENST00000538545 RHBDD2Q6NTF9 364 aa12.97□□□□□ -0.33
ACTN1-205ENST00000538545 ANKK1Q8NFD2 765 aa12.97□□□□□ -0.33
ACTN1-205ENST00000538545 FANK1Q8TC84 345 aa12.97□□□□□ -0.33
ACTN1-205ENST00000538545 DEPDC7Q96QD5 511 aa12.97□□□□□ -0.33
ACTN1-205ENST00000538545 TNFRSF13CQ96RJ3 184 aa12.97□□□□□ -0.33
ACTN1-205ENST00000538545 UBQLN3Q9H347 655 aa12.97□□□□□ -0.33
ACTN1-205ENST00000538545 HINT3Q9NQE9 182 aaKnown RBP12.97□□□□□ -0.33
ACTN1-205ENST00000538545 CFAP47Q6ZTR5 3102 aa12.97□□□□□ -0.33
ACTN1-205ENST00000538545 C4orf47A7E2U8 309 aa12.97□□□□□ -0.33
ACTN1-205ENST00000538545 MASP2O00187 686 aa12.97□□□□□ -0.33
ACTN1-205ENST00000538545 ARHGAP33O14559 1287 aa12.97□□□□□ -0.33
ACTN1-205ENST00000538545 UTS2O95399 124 aa12.97□□□□□ -0.33
ACTN1-205ENST00000538545 BCL10O95999 233 aa12.97□□□□□ -0.33
ACTN1-205ENST00000538545 GYPBP06028 91 aa12.97□□□□□ -0.33
ACTN1-205ENST00000538545 RORAP35398 523 aa12.97□□□□□ -0.33
ACTN1-205ENST00000538545 ELAVL1Q15717 326 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms