RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 LPAR3Q9UBY5 353 aa12.39□□□□□ -0.43
SMARCA4-206ENST00000538456 POU2F3Q9UKI9 436 aa12.39□□□□□ -0.43
SMARCA4-206ENST00000538456 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.38□□□□□ -0.43
SMARCA4-206ENST00000538456 GJE1A6NN92 205 aa12.38□□□□□ -0.43
SMARCA4-206ENST00000538456 ZNF195O14628 629 aa12.38□□□□□ -0.43
SMARCA4-206ENST00000538456 OIP5O43482 229 aa12.38□□□□□ -0.43
SMARCA4-206ENST00000538456 SLC7A1P30825 629 aa12.38□□□□□ -0.43
SMARCA4-206ENST00000538456 OR3A2P47893 321 aa12.38□□□□□ -0.43
SMARCA4-206ENST00000538456 PRKAA2P54646 552 aa12.38□□□□□ -0.43
SMARCA4-206ENST00000538456 DSCR9P59020 149 aa12.38□□□□□ -0.43
SMARCA4-206ENST00000538456 LOXL1Q08397 574 aaPredicted RBP12.38□□□□□ -0.43
SMARCA4-206ENST00000538456 RAB35Q15286 201 aa12.38□□□□□ -0.43
SMARCA4-206ENST00000538456 C11orf71Q6IPW1 123 aa12.38□□□□□ -0.43
SMARCA4-206ENST00000538456 NOXRED1Q6NXP6 359 aa12.38□□□□□ -0.43
SMARCA4-206ENST00000538456 C8orf74Q6P047 294 aa12.38□□□□□ -0.43
SMARCA4-206ENST00000538456 SLC22A25Q6T423 547 aa12.38□□□□□ -0.43
SMARCA4-206ENST00000538456 CCNYL1Q8N7R7 359 aa12.38□□□□□ -0.43
SMARCA4-206ENST00000538456 COX18Q8N8Q8 333 aa12.38□□□□□ -0.43
SMARCA4-206ENST00000538456 OR6Y1Q8NGX8 325 aa12.38□□□□□ -0.43
SMARCA4-206ENST00000538456 CEP70Q8NHQ1 597 aa12.38□□□□□ -0.43
SMARCA4-206ENST00000538456 PHOSPHO1Q8TCT1 267 aa12.38□□□□□ -0.43
SMARCA4-206ENST00000538456 ZFP90Q8TF47 636 aa12.38□□□□□ -0.43
SMARCA4-206ENST00000538456 FAM168AQ92567 244 aa12.38□□□□□ -0.43
SMARCA4-206ENST00000538456 L3HYPDHQ96EM0 354 aa12.38□□□□□ -0.43
SMARCA4-206ENST00000538456 GIMAP5Q96F15 307 aa12.38□□□□□ -0.43
SMARCA4-206ENST00000538456 CHMP6Q96FZ7 201 aa12.38□□□□□ -0.43
SMARCA4-206ENST00000538456 FUT8Q9BYC5 575 aa12.38□□□□□ -0.43
SMARCA4-206ENST00000538456 GSTO2Q9H4Y5 243 aa12.38□□□□□ -0.43
SMARCA4-206ENST00000538456 TMEM160Q9NX00 188 aa12.38□□□□□ -0.43
SMARCA4-206ENST00000538456 KLHL9Q9P2J3 617 aa12.38□□□□□ -0.43
SMARCA4-206ENST00000538456 ZNF180Q9UJW8 692 aa12.38□□□□□ -0.43
SMARCA4-206ENST00000538456 HEATR1Q9H583 2144 aaKnown RBP12.37□□□□□ -0.43
SMARCA4-206ENST00000538456 A0A1W2PNR3 127 aa12.37□□□□□ -0.43
SMARCA4-206ENST00000538456 A0A1W2PQD3 144 aa12.37□□□□□ -0.43
SMARCA4-206ENST00000538456 SERTM1A2A2V5 107 aa12.37□□□□□ -0.43
SMARCA4-206ENST00000538456 ELOA3DA6NLF2 546 aaPredicted RBP12.37□□□□□ -0.43
SMARCA4-206ENST00000538456 E7EQL1 145 aa12.37□□□□□ -0.43
SMARCA4-206ENST00000538456 AKAP10O43572 662 aa12.37□□□□□ -0.43
SMARCA4-206ENST00000538456 CRCPO75575 148 aa12.37□□□□□ -0.43
SMARCA4-206ENST00000538456 SNRPAP09012 282 aaKnown RBP12.37□□□□□ -0.43
SMARCA4-206ENST00000538456 IFI6P09912 130 aa12.37□□□□□ -0.43
SMARCA4-206ENST00000538456 ALOX5P09917 674 aa12.37□□□□□ -0.43
SMARCA4-206ENST00000538456 IGHV4-31P0DP07 118 aa12.37□□□□□ -0.43
SMARCA4-206ENST00000538456 SRD5A1P18405 259 aa12.37□□□□□ -0.43
SMARCA4-206ENST00000538456 GGT1P19440 569 aa12.37□□□□□ -0.43
SMARCA4-206ENST00000538456 EFNA1P20827 205 aaPredicted RBP12.37□□□□□ -0.43
SMARCA4-206ENST00000538456 IGHV1-2P23083 117 aa12.37□□□□□ -0.43
SMARCA4-206ENST00000538456 TTKP33981 857 aa12.37□□□□□ -0.43
SMARCA4-206ENST00000538456 TOMM34Q15785 309 aaPredicted RBP12.37□□□□□ -0.43
SMARCA4-206ENST00000538456 NDUFAF6Q330K2 333 aa12.37□□□□□ -0.43
SMARCA4-206ENST00000538456 ELOA3BQ3SY89 546 aa12.37□□□□□ -0.43
SMARCA4-206ENST00000538456 ZNF385BQ569K4 471 aa12.37□□□□□ -0.43
SMARCA4-206ENST00000538456 CYB5R2Q6BCY4 276 aa12.37□□□□□ -0.43
SMARCA4-206ENST00000538456 CBLN3Q6UW01 205 aa12.37□□□□□ -0.43
SMARCA4-206ENST00000538456 SLC22A9Q8IVM8 553 aa12.37□□□□□ -0.43
SMARCA4-206ENST00000538456 SLC43A2Q8N370 569 aa12.37□□□□□ -0.43
SMARCA4-206ENST00000538456 ELOA3Q8NG57 546 aa12.37□□□□□ -0.43
SMARCA4-206ENST00000538456 ZFP28Q8NHY6 868 aa12.37□□□□□ -0.43
SMARCA4-206ENST00000538456 FAM76AQ8TAV0 307 aa12.37□□□□□ -0.43
SMARCA4-206ENST00000538456 FAM110BQ8TC76 370 aa12.37□□□□□ -0.43
SMARCA4-206ENST00000538456 C16orf58Q96GQ5 468 aa12.37□□□□□ -0.43
SMARCA4-206ENST00000538456 ZNF300Q96RE9 604 aaPredicted RBP12.37□□□□□ -0.43
SMARCA4-206ENST00000538456 PSD2Q9BQI7 771 aa12.37□□□□□ -0.43
SMARCA4-206ENST00000538456 CHODLQ9H9P2 273 aa12.37□□□□□ -0.43
SMARCA4-206ENST00000538456 BCO1Q9HAY6 547 aa12.37□□□□□ -0.43
SMARCA4-206ENST00000538456 CBLN4Q9NTU7 201 aa12.37□□□□□ -0.43
SMARCA4-206ENST00000538456 GIN1Q9NXP7 522 aa12.37□□□□□ -0.43
SMARCA4-206ENST00000538456 ING1Q9UK53 422 aaPredicted RBP12.37□□□□□ -0.43
SMARCA4-206ENST00000538456 CARD8Q9Y2G2 431 aa12.37□□□□□ -0.43
SMARCA4-206ENST00000538456 NPIPA5A0A0B4J1W7 369 aa12.36□□□□□ -0.43
SMARCA4-206ENST00000538456 NPIPA7E9PJI5 369 aa12.36□□□□□ -0.43
SMARCA4-206ENST00000538456 GOLGA8RI6L899 631 aa12.36□□□□□ -0.43
SMARCA4-206ENST00000538456 LMX1BO60663 402 aa12.36□□□□□ -0.43
SMARCA4-206ENST00000538456 SEC22BO75396 215 aa12.36□□□□□ -0.43
SMARCA4-206ENST00000538456 RAD51DO75771 328 aa12.36□□□□□ -0.43
SMARCA4-206ENST00000538456 RSL1D1O76021 490 aaKnown RBP12.36□□□□□ -0.43
SMARCA4-206ENST00000538456 IGHV3-9P01782 118 aa12.36□□□□□ -0.43
SMARCA4-206ENST00000538456 NPIPA8P0DM63 369 aa12.36□□□□□ -0.43
SMARCA4-206ENST00000538456 SLC25A16P16260 332 aa12.36□□□□□ -0.43
SMARCA4-206ENST00000538456 IGFBP5P24593 272 aa12.36□□□□□ -0.43
SMARCA4-206ENST00000538456 CASQ1P31415 396 aa12.36□□□□□ -0.43
SMARCA4-206ENST00000538456 SERPINB4P48594 390 aa12.36□□□□□ -0.43
SMARCA4-206ENST00000538456 ZNF83P51522 516 aa12.36□□□□□ -0.43
SMARCA4-206ENST00000538456 RASGEF1BQ0VAM2 473 aa12.36□□□□□ -0.43
SMARCA4-206ENST00000538456 TIMM23BQ5SRD1 257 aa12.36□□□□□ -0.43
SMARCA4-206ENST00000538456 TMEM108Q6UXF1 575 aa12.36□□□□□ -0.43
SMARCA4-206ENST00000538456 Q6ZSR9 355 aa12.36□□□□□ -0.43
SMARCA4-206ENST00000538456 RELL1Q8IUW5 271 aa12.36□□□□□ -0.43
SMARCA4-206ENST00000538456 FBXL14Q8N1E6 418 aa12.36□□□□□ -0.43
SMARCA4-206ENST00000538456 MUC15Q8N387 334 aa12.36□□□□□ -0.43
SMARCA4-206ENST00000538456 OR52N5Q8NH56 324 aa12.36□□□□□ -0.43
SMARCA4-206ENST00000538456 PPCDCQ96CD2 204 aa12.36□□□□□ -0.43
SMARCA4-206ENST00000538456 L2HGDHQ9H9P8 463 aa12.36□□□□□ -0.43
SMARCA4-206ENST00000538456 ICAM5Q9UMF0 924 aa12.36□□□□□ -0.43
SMARCA4-206ENST00000538456 WBP11Q9Y2W2 641 aaKnown RBP12.36□□□□□ -0.43
SMARCA4-206ENST00000538456 PTGDR2Q9Y5Y4 395 aa12.36□□□□□ -0.43
SMARCA4-206ENST00000538456 GPC6Q9Y625 555 aaPredicted RBP12.36□□□□□ -0.43
SMARCA4-206ENST00000538456 EXOC1LA0A1B0GW35 172 aa12.35□□□□□ -0.43
SMARCA4-206ENST00000538456 A0A1W2PR80 420 aa12.35□□□□□ -0.43
SMARCA4-206ENST00000538456 OR5H1A6NKK0 313 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms