RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 H0YIG0 161 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 APOL3O95236 402 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 PTTG1O95997 202 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 CT45A8P0DMV1 189 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 CT45A9P0DMV2 189 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 GALP22466 123 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 SSTR4P31391 388 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 PSMD4P55036 377 aaKnown RBP8.59□□□□□ -1.03
UBE3B-207ENST00000537063 PSPHP78330 225 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 SLC13A2Q13183 592 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 LRIT3Q3SXY7 679 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 CT45A2Q5DJT8 189 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 SMARCD3Q6STE5 483 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 FAM83FQ8NEG4 500 aaPredicted RBP8.59□□□□□ -1.03
UBE3B-207ENST00000537063 OR4F15Q8NGB8 312 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 OR4N2Q8NGD1 307 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 OR52L1Q8NGH7 329 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 GATAD2BQ8WXI9 593 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 ASB15Q8WXK1 588 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 PEX11GQ96HA9 241 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 TIMP4Q99727 224 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 TMEM27Q9HBJ8 222 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 PRTFDC1Q9NRG1 225 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.59□□□□□ -1.03
UBE3B-207ENST00000537063 BAIAP2Q9UQB8 552 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 MED31Q9Y3C7 131 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 CSNK1G3Q9Y6M4 447 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 DNAH14Q0VDD8 3507 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 LMO7DNF2Z398 122 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 SOCS6O14544 535 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 CTDSP2O14595 271 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 PLD2O14939 933 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 LALBAP00709 142 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 HNRNPCP07910 306 aaKnown RBP eCLIP8.59□□□□□ -1.03
UBE3B-207ENST00000537063 TSPAN19P0C672 248 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 FUT1P19526 365 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 TNFSF8P32971 234 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 NXPH1P58417 271 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 SRSF5Q13243 272 aaKnown RBP8.59□□□□□ -1.03
UBE3B-207ENST00000537063 BIKQ13323 160 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 TCTE1Q5JU00 501 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 THSD4Q6ZMP0 1018 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 MEPCEQ7L2J0 689 aaKnown RBP8.59□□□□□ -1.03
UBE3B-207ENST00000537063 SHFQ7M4L6 423 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 CPOQ8IVL8 374 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 CARFQ8N187 725 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 FAM71CQ8NEG0 241 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 LMX1AQ8TE12 382 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 SLC30A2Q9BRI3 323 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 PELOQ9BRX2 385 aaKnown RBP8.59□□□□□ -1.03
UBE3B-207ENST00000537063 G6PC3Q9BUM1 346 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 RBCK1Q9BYM8 510 aa8.59□□□□□ -1.03
UBE3B-207ENST00000537063 EXOSC4Q9NPD3 245 aaKnown RBP8.59□□□□□ -1.03
UBE3B-207ENST00000537063 PLEKHB1Q9UF11 243 aaPredicted RBP8.59□□□□□ -1.03
UBE3B-207ENST00000537063 TMEM184BQ9Y519 407 aaPredicted RBP8.59□□□□□ -1.03
UBE3B-207ENST00000537063 NGFRP08138 427 aa8.59□□□□□ -1.04
UBE3B-207ENST00000537063 MAT1AQ00266 395 aaKnown RBP8.59□□□□□ -1.04
UBE3B-207ENST00000537063 DNASE1L3Q13609 305 aa8.59□□□□□ -1.04
UBE3B-207ENST00000537063 ZNF362Q5T0B9 420 aaPredicted RBP8.59□□□□□ -1.04
UBE3B-207ENST00000537063 KLHL36Q8N4N3 616 aa8.59□□□□□ -1.04
UBE3B-207ENST00000537063 RCBTB1Q8NDN9 531 aa8.59□□□□□ -1.04
UBE3B-207ENST00000537063 OR13C2Q8NGS9 318 aa8.59□□□□□ -1.04
UBE3B-207ENST00000537063 ITPKCQ96DU7 683 aa8.59□□□□□ -1.04
UBE3B-207ENST00000537063 DGAT2Q96PD7 388 aa8.59□□□□□ -1.04
UBE3B-207ENST00000537063 IL20RAQ9UHF4 553 aa8.59□□□□□ -1.04
UBE3B-207ENST00000537063 CAB39Q9Y376 341 aaPredicted RBP8.59□□□□□ -1.04
UBE3B-207ENST00000537063 IGHV5-51A0A0C4DH38 117 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 BOLA2-SMG1P6H3BVE0 249 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 TBX1O43435 398 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 HYAL3O43820 417 aaPredicted RBP8.58□□□□□ -1.04
UBE3B-207ENST00000537063 HCN1O60741 890 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 MLLT3P42568 568 aaPredicted RBP8.58□□□□□ -1.04
UBE3B-207ENST00000537063 STARD6P59095 220 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 BTG2P78543 158 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 FOXK2Q01167 660 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 FABP5Q01469 135 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 STX4Q12846 297 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 GPR50Q13585 617 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 SPANXN2Q5MJ10 180 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 PRPF38BQ5VTL8 546 aaKnown RBP8.58□□□□□ -1.04
UBE3B-207ENST00000537063 ZNF322Q6U7Q0 402 aaPredicted RBP8.58□□□□□ -1.04
UBE3B-207ENST00000537063 BMP8AQ7Z5Y6 402 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 KCTD7Q96MP8 289 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 LRFN5Q96NI6 719 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 KCNS3Q9BQ31 491 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 MCCC2Q9HCC0 563 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 ABCB10Q9NRK6 738 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 INPP5EQ9NRR6 644 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 LANCL2Q9NS86 450 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 ASB6Q9NWX5 421 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 YARS2Q9Y2Z4 477 aaKnown RBP8.58□□□□□ -1.04
UBE3B-207ENST00000537063 EFCAB7A8K855 629 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 CLDN4O14493 209 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 SLC30A4O14863 429 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 AQP9O43315 295 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 AKAP8O43823 692 aaKnown RBP8.58□□□□□ -1.04
UBE3B-207ENST00000537063 IGFBP4P22692 258 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 RNF144AP50876 292 aaPredicted RBP8.58□□□□□ -1.04
UBE3B-207ENST00000537063 ATP12AP54707 1039 aa8.58□□□□□ -1.04
UBE3B-207ENST00000537063 GFERP55789 205 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms