RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 SNTB1Q13884 538 aaKnown RBP16.12■□□□□ 0.17
TNFRSF1A-209ENST00000536717 TMEM44Q2T9K0 475 aa16.12■□□□□ 0.17
TNFRSF1A-209ENST00000536717 GLYR1Q49A26 553 aaPredicted RBP16.12■□□□□ 0.17
TNFRSF1A-209ENST00000536717 GTDC1Q4AE62 458 aa16.12■□□□□ 0.17
TNFRSF1A-209ENST00000536717 FAM91A1Q658Y4 838 aa16.12■□□□□ 0.17
TNFRSF1A-209ENST00000536717 UBQLNLQ8IYU4 475 aa16.12■□□□□ 0.17
TNFRSF1A-209ENST00000536717 FITM2Q8N6M3 262 aa16.12■□□□□ 0.17
TNFRSF1A-209ENST00000536717 ADAMTS15Q8TE58 950 aa16.12■□□□□ 0.17
TNFRSF1A-209ENST00000536717 ZFP90Q8TF47 636 aa16.12■□□□□ 0.17
TNFRSF1A-209ENST00000536717 WNT2BQ93097 391 aa16.12■□□□□ 0.17
TNFRSF1A-209ENST00000536717 TM9SF2Q99805 663 aa16.12■□□□□ 0.17
TNFRSF1A-209ENST00000536717 SERHL2Q9H4I8 314 aa16.12■□□□□ 0.17
TNFRSF1A-209ENST00000536717 TPT1P8Q9HAU6 139 aa16.12■□□□□ 0.17
TNFRSF1A-209ENST00000536717 SLAMF8Q9P0V8 285 aa16.12■□□□□ 0.17
TNFRSF1A-209ENST00000536717 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.12■□□□□ 0.17
TNFRSF1A-209ENST00000536717 KCNN3Q9UGI6 736 aa16.12■□□□□ 0.17
TNFRSF1A-209ENST00000536717 A0A1W2PQD3 144 aa16.11■□□□□ 0.17
TNFRSF1A-209ENST00000536717 DUXAA6NLW8 204 aa16.11■□□□□ 0.17
TNFRSF1A-209ENST00000536717 SHISA8B8ZZ34 492 aa16.11■□□□□ 0.17
TNFRSF1A-209ENST00000536717 H0YC42 278 aa16.11■□□□□ 0.17
TNFRSF1A-209ENST00000536717 RCBTB2O95199 551 aa16.11■□□□□ 0.17
TNFRSF1A-209ENST00000536717 TGM6O95932 706 aa16.11■□□□□ 0.17
TNFRSF1A-209ENST00000536717 IL18BPO95998 194 aa16.11■□□□□ 0.17
TNFRSF1A-209ENST00000536717 NPPAP01160 153 aa16.11■□□□□ 0.17
TNFRSF1A-209ENST00000536717 TMIGD3P0DMS9 266 aaPredicted RBP16.11■□□□□ 0.17
TNFRSF1A-209ENST00000536717 POU3F2P20265 443 aaPredicted RBP16.11■□□□□ 0.17
TNFRSF1A-209ENST00000536717 OPRM1P35372 400 aa16.11■□□□□ 0.17
TNFRSF1A-209ENST00000536717 ANXA11P50995 505 aaKnown RBP16.11■□□□□ 0.17
TNFRSF1A-209ENST00000536717 TPD52P55327 224 aaPredicted RBP16.11■□□□□ 0.17
TNFRSF1A-209ENST00000536717 RPS26P62854 115 aaKnown RBP16.11■□□□□ 0.17
TNFRSF1A-209ENST00000536717 CD226Q15762 336 aa16.11■□□□□ 0.17
TNFRSF1A-209ENST00000536717 TRMT5Q32P41 509 aaKnown RBP16.11■□□□□ 0.17
TNFRSF1A-209ENST00000536717 DCST2Q5T1A1 773 aa16.11■□□□□ 0.17
TNFRSF1A-209ENST00000536717 DLEU7Q6UYE1 221 aa16.11■□□□□ 0.17
TNFRSF1A-209ENST00000536717 OR5D16Q8NGK9 328 aa16.11■□□□□ 0.17
TNFRSF1A-209ENST00000536717 RCN3Q96D15 328 aa16.11■□□□□ 0.17
TNFRSF1A-209ENST00000536717 ZFP3Q96NJ6 502 aa16.11■□□□□ 0.17
TNFRSF1A-209ENST00000536717 OR7D2Q96RA2 312 aa16.11■□□□□ 0.17
TNFRSF1A-209ENST00000536717 KLHDC3Q9BQ90 382 aa16.11■□□□□ 0.17
TNFRSF1A-209ENST00000536717 PIGQQ9BRB3 760 aa16.11■□□□□ 0.17
TNFRSF1A-209ENST00000536717 EFCAB1Q9HAE3 211 aa16.11■□□□□ 0.17
TNFRSF1A-209ENST00000536717 GID8Q9NWU2 228 aa16.11■□□□□ 0.17
TNFRSF1A-209ENST00000536717 JKAMPQ9P055 326 aa16.11■□□□□ 0.17
TNFRSF1A-209ENST00000536717 VAPAQ9P0L0 249 aa16.11■□□□□ 0.17
TNFRSF1A-209ENST00000536717 VDAC3Q9Y277 283 aa16.11■□□□□ 0.17
TNFRSF1A-209ENST00000536717 HRNRQ86YZ3 2850 aaPredicted RBP16.1■□□□□ 0.17
TNFRSF1A-209ENST00000536717 NPIPA5A0A0B4J1W7 369 aa16.1■□□□□ 0.17
TNFRSF1A-209ENST00000536717 NPIPA7E9PJI5 369 aa16.1■□□□□ 0.17
TNFRSF1A-209ENST00000536717 H3BML4 177 aa16.1■□□□□ 0.17
TNFRSF1A-209ENST00000536717 LINC01387J3KSC0 135 aa16.1■□□□□ 0.17
TNFRSF1A-209ENST00000536717 CLIC1O00299 241 aa16.1■□□□□ 0.17
TNFRSF1A-209ENST00000536717 NPIPA8P0DM63 369 aa16.1■□□□□ 0.17
TNFRSF1A-209ENST00000536717 HPGDP15428 266 aa16.1■□□□□ 0.17
TNFRSF1A-209ENST00000536717 PPIBP23284 216 aaKnown RBP16.1■□□□□ 0.17
TNFRSF1A-209ENST00000536717 UQCRC1P31930 480 aa16.1■□□□□ 0.17
TNFRSF1A-209ENST00000536717 TXNL4AP83876 142 aaKnown RBP16.1■□□□□ 0.17
TNFRSF1A-209ENST00000536717 RNF130Q86XS8 419 aa16.1■□□□□ 0.17
TNFRSF1A-209ENST00000536717 GRAMD2AQ8IUY3 354 aa16.1■□□□□ 0.17
TNFRSF1A-209ENST00000536717 PNPT1Q8TCS8 783 aaKnown RBP16.1■□□□□ 0.17
TNFRSF1A-209ENST00000536717 MIPOL1Q8TD10 442 aa16.1■□□□□ 0.17
TNFRSF1A-209ENST00000536717 RNASE6Q93091 150 aaKnown RBP16.1■□□□□ 0.17
TNFRSF1A-209ENST00000536717 INTS12Q96CB8 462 aaKnown RBP16.1■□□□□ 0.17
TNFRSF1A-209ENST00000536717 AURKBQ96GD4 344 aaPredicted RBP16.1■□□□□ 0.17
TNFRSF1A-209ENST00000536717 NPAS1Q99742 590 aa16.1■□□□□ 0.17
TNFRSF1A-209ENST00000536717 RAD21L1Q9H4I0 556 aa16.1■□□□□ 0.17
TNFRSF1A-209ENST00000536717 SLC25A37Q9NYZ2 338 aa16.1■□□□□ 0.17
TNFRSF1A-209ENST00000536717 TRBV5-3A0A0A0MS03 114 aa16.09■□□□□ 0.17
TNFRSF1A-209ENST00000536717 EVPLLA8MZ36 301 aa16.09■□□□□ 0.17
TNFRSF1A-209ENST00000536717 SCDO00767 359 aa16.09■□□□□ 0.17
TNFRSF1A-209ENST00000536717 AIM2O14862 343 aa16.09■□□□□ 0.17
TNFRSF1A-209ENST00000536717 SEC14L5O43304 696 aa16.09■□□□□ 0.17
TNFRSF1A-209ENST00000536717 HOXB9P17482 250 aaPredicted RBP16.09■□□□□ 0.17
TNFRSF1A-209ENST00000536717 MAGEA8P43361 318 aa16.09■□□□□ 0.17
TNFRSF1A-209ENST00000536717 KHKP50053 298 aa16.09■□□□□ 0.17
TNFRSF1A-209ENST00000536717 CASP9P55211 416 aa16.09■□□□□ 0.17
TNFRSF1A-209ENST00000536717 CLDN20P56880 219 aa16.09■□□□□ 0.17
TNFRSF1A-209ENST00000536717 KRT72Q14CN4 511 aa16.09■□□□□ 0.17
TNFRSF1A-209ENST00000536717 TRPM8Q7Z2W7 1104 aa16.09■□□□□ 0.17
TNFRSF1A-209ENST00000536717 MISPQ8IVT2 679 aa16.09■□□□□ 0.17
TNFRSF1A-209ENST00000536717 GCNT2Q8N0V5 402 aa16.09■□□□□ 0.17
TNFRSF1A-209ENST00000536717 SH3YL1Q96HL8 342 aaPredicted RBP16.09■□□□□ 0.17
TNFRSF1A-209ENST00000536717 CGREF1Q99674 301 aa16.09■□□□□ 0.17
TNFRSF1A-209ENST00000536717 ZNF559Q9BR84 538 aa16.09■□□□□ 0.17
TNFRSF1A-209ENST00000536717 SLC24A3Q9HC58 644 aa16.09■□□□□ 0.17
TNFRSF1A-209ENST00000536717 TAGLN3Q9UI15 199 aa16.09■□□□□ 0.17
TNFRSF1A-209ENST00000536717 CORO2BQ9UQ03 480 aa16.09■□□□□ 0.17
TNFRSF1A-209ENST00000536717 NPIPB9F8W1W9 429 aa16.09■□□□□ 0.17
TNFRSF1A-209ENST00000536717 AGR2O95994 175 aa16.09■□□□□ 0.17
TNFRSF1A-209ENST00000536717 ATP6V1C1P21283 382 aa16.09■□□□□ 0.17
TNFRSF1A-209ENST00000536717 MYBPHQ13203 477 aa16.09■□□□□ 0.17
TNFRSF1A-209ENST00000536717 PLPPR5Q32ZL2 321 aa16.09■□□□□ 0.17
TNFRSF1A-209ENST00000536717 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.09■□□□□ 0.17
TNFRSF1A-209ENST00000536717 TNFAIP8L2Q6P589 184 aaPredicted RBP16.09■□□□□ 0.17
TNFRSF1A-209ENST00000536717 MSRB3Q8IXL7 192 aa16.09■□□□□ 0.17
TNFRSF1A-209ENST00000536717 MEIOBQ8N635 442 aa16.09■□□□□ 0.17
TNFRSF1A-209ENST00000536717 ROPN1LQ96C74 230 aa16.09■□□□□ 0.17
TNFRSF1A-209ENST00000536717 LRRC58Q96CX6 371 aa16.09■□□□□ 0.17
TNFRSF1A-209ENST00000536717 ANKRD27Q96NW4 1050 aa16.09■□□□□ 0.17
TNFRSF1A-209ENST00000536717 SDF2Q99470 211 aa16.09■□□□□ 0.17
TNFRSF1A-209ENST00000536717 SFXN3Q9BWM7 321 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms