RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 ZNF619Q8N2I2 560 aa16.24■□□□□ 0.19
CCDC61-201ENST00000536603 POU5F2Q8N7G0 328 aa16.24■□□□□ 0.19
CCDC61-201ENST00000536603 OR10Q1Q8NGQ4 319 aa16.24■□□□□ 0.19
CCDC61-201ENST00000536603 LILRB4Q8NHJ6 448 aa16.24■□□□□ 0.19
CCDC61-201ENST00000536603 ZG16BQ96DA0 208 aa16.24■□□□□ 0.19
CCDC61-201ENST00000536603 TRNT1Q96Q11 434 aaKnown RBP16.24■□□□□ 0.19
CCDC61-201ENST00000536603 LRRC37BQ96QE4 947 aa16.24■□□□□ 0.19
CCDC61-201ENST00000536603 KLHDC3Q9BQ90 382 aa16.24■□□□□ 0.19
CCDC61-201ENST00000536603 SAP130Q9H0E3 1048 aa16.24■□□□□ 0.19
CCDC61-201ENST00000536603 POLE3Q9NRF9 147 aa16.24■□□□□ 0.19
CCDC61-201ENST00000536603 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.24■□□□□ 0.19
CCDC61-201ENST00000536603 CARD8Q9Y2G2 431 aa16.24■□□□□ 0.19
CCDC61-201ENST00000536603 ZNF337Q9Y3M9 751 aa16.24■□□□□ 0.19
CCDC61-201ENST00000536603 LOC100653049A0A140TA62 436 aa16.23■□□□□ 0.19
CCDC61-201ENST00000536603 SERINC4A6NH21 518 aa16.23■□□□□ 0.19
CCDC61-201ENST00000536603 SHISA8B8ZZ34 492 aa16.23■□□□□ 0.19
CCDC61-201ENST00000536603 CLIC1O00299 241 aa16.23■□□□□ 0.19
CCDC61-201ENST00000536603 FBP2O00757 339 aa16.23■□□□□ 0.19
CCDC61-201ENST00000536603 KIAA0513O60268 411 aa16.23■□□□□ 0.19
CCDC61-201ENST00000536603 KRT34O76011 436 aa16.23■□□□□ 0.19
CCDC61-201ENST00000536603 NR2F1P10589 423 aa16.23■□□□□ 0.19
CCDC61-201ENST00000536603 CPN1P15169 458 aa16.23■□□□□ 0.19
CCDC61-201ENST00000536603 HOXB9P17482 250 aaPredicted RBP16.23■□□□□ 0.19
CCDC61-201ENST00000536603 ADSLP30566 484 aaPredicted RBP16.23■□□□□ 0.19
CCDC61-201ENST00000536603 MAPK14Q16539 360 aa16.23■□□□□ 0.19
CCDC61-201ENST00000536603 NDUFAF6Q330K2 333 aa16.23■□□□□ 0.19
CCDC61-201ENST00000536603 GLYR1Q49A26 553 aaPredicted RBP16.23■□□□□ 0.19
CCDC61-201ENST00000536603 LRIF1Q5T3J3 769 aa16.23■□□□□ 0.19
CCDC61-201ENST00000536603 AP1ARQ63HQ0 302 aa16.23■□□□□ 0.19
CCDC61-201ENST00000536603 FAM91A1Q658Y4 838 aa16.23■□□□□ 0.19
CCDC61-201ENST00000536603 HMGN2P46Q86SG4 172 aa16.23■□□□□ 0.19
CCDC61-201ENST00000536603 RETREG3Q86VR2 466 aa16.23■□□□□ 0.19
CCDC61-201ENST00000536603 SNX32Q86XE0 403 aa16.23■□□□□ 0.19
CCDC61-201ENST00000536603 CCDC71Q8IV32 467 aaPredicted RBP16.23■□□□□ 0.19
CCDC61-201ENST00000536603 PIGQQ9BRB3 760 aa16.23■□□□□ 0.19
CCDC61-201ENST00000536603 NPDC1Q9NQX5 325 aaPredicted RBP16.23■□□□□ 0.19
CCDC61-201ENST00000536603 MED17Q9NVC6 651 aa16.23■□□□□ 0.19
CCDC61-201ENST00000536603 ARL8BQ9NVJ2 186 aa16.23■□□□□ 0.19
CCDC61-201ENST00000536603 SLC25A37Q9NYZ2 338 aa16.23■□□□□ 0.19
CCDC61-201ENST00000536603 NDUFAF1Q9Y375 327 aa16.23■□□□□ 0.19
CCDC61-201ENST00000536603 SETD2Q9BYW2 2564 aaPredicted RBP16.23■□□□□ 0.19
CCDC61-201ENST00000536603 PHF3Q92576 2039 aaKnown RBP16.23■□□□□ 0.19
CCDC61-201ENST00000536603 A0A087WZY1 265 aa16.22■□□□□ 0.19
CCDC61-201ENST00000536603 OR2M5A3KFT3 312 aa16.22■□□□□ 0.19
CCDC61-201ENST00000536603 KDM4EB2RXH2 506 aaPredicted RBP16.22■□□□□ 0.19
CCDC61-201ENST00000536603 FAM47E-STBD1D6RA91 191 aa16.22■□□□□ 0.19
CCDC61-201ENST00000536603 SLC22A2O15244 555 aa16.22■□□□□ 0.19
CCDC61-201ENST00000536603 EPPINO95925 133 aa16.22■□□□□ 0.19
CCDC61-201ENST00000536603 CHRM4P08173 479 aa16.22■□□□□ 0.19
CCDC61-201ENST00000536603 PEPDP12955 493 aa16.22■□□□□ 0.19
CCDC61-201ENST00000536603 MAGEA8P43361 318 aa16.22■□□□□ 0.19
CCDC61-201ENST00000536603 P2RX1P51575 399 aa16.22■□□□□ 0.19
CCDC61-201ENST00000536603 ZNF41P51814 821 aaPredicted RBP16.22■□□□□ 0.19
CCDC61-201ENST00000536603 CLDN18P56856 261 aa16.22■□□□□ 0.19
CCDC61-201ENST00000536603 SF3B4Q15427 424 aaKnown RBP eCLIP16.22■□□□□ 0.194e-9■■■■■ 36.5
CCDC61-201ENST00000536603 RGNQ15493 299 aa16.22■□□□□ 0.19
CCDC61-201ENST00000536603 KRTAP21-3Q3LHN1 58 aa16.22■□□□□ 0.19
CCDC61-201ENST00000536603 ACSF3Q4G176 576 aaPredicted RBP16.22■□□□□ 0.19
CCDC61-201ENST00000536603 LRRC74BQ6ZQY2 392 aa16.22■□□□□ 0.19
CCDC61-201ENST00000536603 MSRB3Q8IXL7 192 aa16.22■□□□□ 0.19
CCDC61-201ENST00000536603 TRIB1Q96RU8 372 aa16.22■□□□□ 0.19
CCDC61-201ENST00000536603 QRSL1Q9H0R6 528 aaKnown RBP16.22■□□□□ 0.19
CCDC61-201ENST00000536603 VAPAQ9P0L0 249 aa16.22■□□□□ 0.19
CCDC61-201ENST00000536603 ICAM5Q9UMF0 924 aa16.22■□□□□ 0.19
CCDC61-201ENST00000536603 H0Y3Z8 333 aa16.21■□□□□ 0.19
CCDC61-201ENST00000536603 H3BML4 177 aa16.21■□□□□ 0.19
CCDC61-201ENST00000536603 LINC01387J3KSC0 135 aa16.21■□□□□ 0.19
CCDC61-201ENST00000536603 ZNF264O43296 627 aa16.21■□□□□ 0.19
CCDC61-201ENST00000536603 EIF4E2O60573 245 aaKnown RBP16.21■□□□□ 0.19
CCDC61-201ENST00000536603 TOXO94900 526 aa16.21■□□□□ 0.19
CCDC61-201ENST00000536603 NUDT14O95848 222 aa16.21■□□□□ 0.19
CCDC61-201ENST00000536603 CSTAP01040 98 aa16.21■□□□□ 0.19
CCDC61-201ENST00000536603 UBL4AP11441 157 aa16.21■□□□□ 0.19
CCDC61-201ENST00000536603 COX4I1P13073 169 aa16.21■□□□□ 0.19
CCDC61-201ENST00000536603 CD99P14209 185 aa16.21■□□□□ 0.19
CCDC61-201ENST00000536603 ZNF708P17019 499 aa16.21■□□□□ 0.19
CCDC61-201ENST00000536603 IGFBP2P18065 325 aa16.21■□□□□ 0.19
CCDC61-201ENST00000536603 ADH7P40394 386 aa16.21■□□□□ 0.19
CCDC61-201ENST00000536603 DSTNP60981 165 aa16.21■□□□□ 0.19
CCDC61-201ENST00000536603 MAPK11Q15759 364 aa16.21■□□□□ 0.19
CCDC61-201ENST00000536603 BCL2A1Q16548 175 aa16.21■□□□□ 0.19
CCDC61-201ENST00000536603 TMEM44Q2T9K0 475 aa16.21■□□□□ 0.19
CCDC61-201ENST00000536603 SEM1Q6ZVN7 128 aa16.21■□□□□ 0.19
CCDC61-201ENST00000536603 EIF3MQ7L2H7 374 aaKnown RBP16.21■□□□□ 0.19
CCDC61-201ENST00000536603 DMRTC2Q8IXT2 367 aaPredicted RBP16.21■□□□□ 0.19
CCDC61-201ENST00000536603 UBQLNLQ8IYU4 475 aa16.21■□□□□ 0.19
CCDC61-201ENST00000536603 TMCO5AQ8N6Q1 288 aa16.21■□□□□ 0.19
CCDC61-201ENST00000536603 ZPLD1Q8TCW7 415 aa16.21■□□□□ 0.19
CCDC61-201ENST00000536603 POM121Q96HA1 1249 aa16.21■□□□□ 0.19
CCDC61-201ENST00000536603 NPAS1Q99742 590 aa16.21■□□□□ 0.19
CCDC61-201ENST00000536603 TUBA1CQ9BQE3 449 aa16.21■□□□□ 0.19
CCDC61-201ENST00000536603 SLC38A1Q9H2H9 487 aa16.21■□□□□ 0.19
CCDC61-201ENST00000536603 RAD21L1Q9H4I0 556 aa16.21■□□□□ 0.19
CCDC61-201ENST00000536603 MTHFD2LQ9H903 347 aaPredicted RBP16.21■□□□□ 0.19
CCDC61-201ENST00000536603 SLC24A3Q9HC58 644 aa16.21■□□□□ 0.19
CCDC61-201ENST00000536603 P2RX2Q9UBL9 471 aa16.21■□□□□ 0.19
CCDC61-201ENST00000536603 KCNN3Q9UGI6 736 aa16.21■□□□□ 0.19
CCDC61-201ENST00000536603 LEF1Q9UJU2 399 aaPredicted RBP16.21■□□□□ 0.19
CCDC61-201ENST00000536603 L3MBTL1Q9Y468 752 aa16.21■□□□□ 0.19
CCDC61-201ENST00000536603 A0A0G2JNJ9 132 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 143.3 ms