RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 ROPN1LQ96C74 230 aa12.82□□□□□ -0.36
UBE3B-206ENST00000536398 STARD4Q96DR4 205 aa12.82□□□□□ -0.36
UBE3B-206ENST00000536398 ADGRG7Q96K78 797 aa12.82□□□□□ -0.36
UBE3B-206ENST00000536398 NMUR2Q9GZQ4 415 aa12.82□□□□□ -0.36
UBE3B-206ENST00000536398 VIPAS39Q9H9C1 493 aa12.82□□□□□ -0.36
UBE3B-206ENST00000536398 EXD2Q9NVH0 621 aa12.82□□□□□ -0.36
UBE3B-206ENST00000536398 ZIM2Q9NZV7 527 aa12.82□□□□□ -0.36
UBE3B-206ENST00000536398 CREBBPQ92793 2442 aa12.82□□□□□ -0.36
UBE3B-206ENST00000536398 TACC2O95359 2948 aa12.82□□□□□ -0.36
UBE3B-206ENST00000536398 HMGB1P1B2RPK0 211 aaPredicted RBP12.81□□□□□ -0.36
UBE3B-206ENST00000536398 H3BNH8 94 aa12.81□□□□□ -0.36
UBE3B-206ENST00000536398 TNFSF11O14788 317 aa12.81□□□□□ -0.36
UBE3B-206ENST00000536398 ZNF264O43296 627 aa12.81□□□□□ -0.36
UBE3B-206ENST00000536398 CXCL13O43927 109 aa12.81□□□□□ -0.36
UBE3B-206ENST00000536398 CYP7B1O75881 506 aa12.81□□□□□ -0.36
UBE3B-206ENST00000536398 AK1P00568 194 aa12.81□□□□□ -0.36
UBE3B-206ENST00000536398 IL6P05231 212 aa12.81□□□□□ -0.36
UBE3B-206ENST00000536398 UBL4AP11441 157 aa12.81□□□□□ -0.36
UBE3B-206ENST00000536398 CD1EP15812 388 aa12.81□□□□□ -0.36
UBE3B-206ENST00000536398 KHKP50053 298 aa12.81□□□□□ -0.36
UBE3B-206ENST00000536398 POLR2JP52435 117 aaKnown RBP12.81□□□□□ -0.36
UBE3B-206ENST00000536398 RAC1P63000 192 aa12.81□□□□□ -0.36
UBE3B-206ENST00000536398 PPP2R2AP63151 447 aa12.81□□□□□ -0.36
UBE3B-206ENST00000536398 SIRPAP78324 504 aa12.81□□□□□ -0.36
UBE3B-206ENST00000536398 SYPL1Q16563 259 aa12.81□□□□□ -0.36
UBE3B-206ENST00000536398 SGCBQ16585 318 aa12.81□□□□□ -0.36
UBE3B-206ENST00000536398 PPP4R4Q6NUP7 873 aa12.81□□□□□ -0.36
UBE3B-206ENST00000536398 FRRS1Q6ZNA5 592 aa12.81□□□□□ -0.36
UBE3B-206ENST00000536398 BTLAQ7Z6A9 289 aa12.81□□□□□ -0.36
UBE3B-206ENST00000536398 LURAP1LQ8IV03 231 aa12.81□□□□□ -0.36
UBE3B-206ENST00000536398 LILRA2Q8N149 483 aa12.81□□□□□ -0.36
UBE3B-206ENST00000536398 MIER2Q8N344 545 aa12.81□□□□□ -0.36
UBE3B-206ENST00000536398 TMCO5AQ8N6Q1 288 aa12.81□□□□□ -0.36
UBE3B-206ENST00000536398 CNEP1R1Q8N9A8 125 aa12.81□□□□□ -0.36
UBE3B-206ENST00000536398 GLB1L3Q8NCI6 653 aaPredicted RBP12.81□□□□□ -0.36
UBE3B-206ENST00000536398 OR10D3Q8NH80 312 aa12.81□□□□□ -0.36
UBE3B-206ENST00000536398 DYDC1Q8WWB3 177 aa12.81□□□□□ -0.36
UBE3B-206ENST00000536398 ZFP3Q96NJ6 502 aa12.81□□□□□ -0.36
UBE3B-206ENST00000536398 RBM24Q9BX46 236 aaKnown RBP12.81□□□□□ -0.36
UBE3B-206ENST00000536398 QRSL1Q9H0R6 528 aaKnown RBP12.81□□□□□ -0.36
UBE3B-206ENST00000536398 RNF122Q9H9V4 155 aa12.81□□□□□ -0.36
UBE3B-206ENST00000536398 HHATLQ9HCP6 504 aa12.81□□□□□ -0.36
UBE3B-206ENST00000536398 INTS9Q9NV88 658 aaKnown RBP12.81□□□□□ -0.36
UBE3B-206ENST00000536398 ARGLU1Q9NWB6 273 aaPredicted RBP12.81□□□□□ -0.36
UBE3B-206ENST00000536398 WDR45Q9Y484 360 aa12.81□□□□□ -0.36
UBE3B-206ENST00000536398 CLDN24A6NM45 220 aa12.8□□□□□ -0.36
UBE3B-206ENST00000536398 RFXANKO14593 260 aa12.8□□□□□ -0.36
UBE3B-206ENST00000536398 ADAMDEC1O15204 470 aa12.8□□□□□ -0.36
UBE3B-206ENST00000536398 KIAA0513O60268 411 aa12.8□□□□□ -0.36
UBE3B-206ENST00000536398 EIF4E2O60573 245 aaKnown RBP12.8□□□□□ -0.36
UBE3B-206ENST00000536398 SMNDC1O75940 238 aaKnown RBP eCLIP12.8□□□□□ -0.36
UBE3B-206ENST00000536398 H6PDO95479 791 aa12.8□□□□□ -0.36
UBE3B-206ENST00000536398 AGR2O95994 175 aa12.8□□□□□ -0.36
UBE3B-206ENST00000536398 CHRM4P08173 479 aa12.8□□□□□ -0.36
UBE3B-206ENST00000536398 UBTFL6P0CB48 400 aaPredicted RBP12.8□□□□□ -0.36
UBE3B-206ENST00000536398 PRKCAP17252 672 aa12.8□□□□□ -0.36
UBE3B-206ENST00000536398 SFTPDP35247 375 aa12.8□□□□□ -0.36
UBE3B-206ENST00000536398 CCR4P51679 360 aa12.8□□□□□ -0.36
UBE3B-206ENST00000536398 MVDP53602 400 aa12.8□□□□□ -0.36
UBE3B-206ENST00000536398 AQP5P55064 265 aa12.8□□□□□ -0.36
UBE3B-206ENST00000536398 SUMO3P55854 103 aaPredicted RBP12.8□□□□□ -0.36
UBE3B-206ENST00000536398 RPS3AP61247 264 aaKnown RBP12.8□□□□□ -0.36
UBE3B-206ENST00000536398 PLAURQ03405 335 aa12.8□□□□□ -0.36
UBE3B-206ENST00000536398 SKP2Q13309 424 aa12.8□□□□□ -0.36
UBE3B-206ENST00000536398 QPRTQ15274 297 aa12.8□□□□□ -0.36
UBE3B-206ENST00000536398 MAPK11Q15759 364 aa12.8□□□□□ -0.36
UBE3B-206ENST00000536398 TIGD2Q4W5G0 525 aa12.8□□□□□ -0.36
UBE3B-206ENST00000536398 GPAT3Q53EU6 434 aa12.8□□□□□ -0.36
UBE3B-206ENST00000536398 ATAD3BQ5T9A4 648 aa12.8□□□□□ -0.36
UBE3B-206ENST00000536398 GOLGA6L1Q8N7Z2 621 aa12.8□□□□□ -0.36
UBE3B-206ENST00000536398 ATP6V1C2Q8NEY4 427 aa12.8□□□□□ -0.36
UBE3B-206ENST00000536398 OR5W2Q8NH69 310 aa12.8□□□□□ -0.36
UBE3B-206ENST00000536398 OR2V1Q8NHB1 315 aa12.8□□□□□ -0.36
UBE3B-206ENST00000536398 ZFP90Q8TF47 636 aa12.8□□□□□ -0.36
UBE3B-206ENST00000536398 CKAP2Q8WWK9 683 aa12.8□□□□□ -0.36
UBE3B-206ENST00000536398 NRGNQ92686 78 aa12.8□□□□□ -0.36
UBE3B-206ENST00000536398 THOC1Q96FV9 657 aaKnown RBP12.8□□□□□ -0.36
UBE3B-206ENST00000536398 THUMPD3Q9BV44 507 aaKnown RBP12.8□□□□□ -0.36
UBE3B-206ENST00000536398 LAT2Q9GZY6 243 aa12.8□□□□□ -0.36
UBE3B-206ENST00000536398 SAP130Q9H0E3 1048 aa12.8□□□□□ -0.36
UBE3B-206ENST00000536398 OPN3Q9H1Y3 402 aaPredicted RBP12.8□□□□□ -0.36
UBE3B-206ENST00000536398 GALNT8Q9NY28 637 aa12.8□□□□□ -0.36
UBE3B-206ENST00000536398 PACSIN3Q9UKS6 424 aa12.8□□□□□ -0.36
UBE3B-206ENST00000536398 CLEC4AQ9UMR7 237 aa12.8□□□□□ -0.36
UBE3B-206ENST00000536398 ZNF175Q9Y473 711 aa12.8□□□□□ -0.36
UBE3B-206ENST00000536398 POLQO75417 2590 aa12.79□□□□□ -0.36
UBE3B-206ENST00000536398 FAM234BA2RU67 622 aa12.79□□□□□ -0.36
UBE3B-206ENST00000536398 A8MXE2 369 aa12.79□□□□□ -0.36
UBE3B-206ENST00000536398 TGDSO95455 350 aa12.79□□□□□ -0.36
UBE3B-206ENST00000536398 NTN1O95631 604 aa12.79□□□□□ -0.36
UBE3B-206ENST00000536398 CSTAP01040 98 aa12.79□□□□□ -0.36
UBE3B-206ENST00000536398 PGM1P36871 562 aa12.79□□□□□ -0.36
UBE3B-206ENST00000536398 EIF1P41567 113 aaKnown RBP12.79□□□□□ -0.36
UBE3B-206ENST00000536398 CPA2P48052 419 aa12.79□□□□□ -0.36
UBE3B-206ENST00000536398 FAM27E3Q08E93 113 aa12.79□□□□□ -0.36
UBE3B-206ENST00000536398 FGFBP1Q14512 234 aa12.79□□□□□ -0.36
UBE3B-206ENST00000536398 GUSBP1Q15486 140 aa12.79□□□□□ -0.36
UBE3B-206ENST00000536398 TMEM176BQ3YBM2 270 aaPredicted RBP12.79□□□□□ -0.36
UBE3B-206ENST00000536398 AP1ARQ63HQ0 302 aa12.79□□□□□ -0.36
UBE3B-206ENST00000536398 HBMQ6B0K9 141 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms