RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 ZNF621Q6ZSS3 439 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 HFE2Q6ZVN8 426 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 OR2W3Q7Z3T1 314 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 SPATA19Q7Z5L4 167 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 DDX53Q86TM3 631 aaKnown RBP3.47□□□□□ -1.85
MCF2-210ENST00000536274 AQP11Q8NBQ7 271 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 DBF4BQ8NFT6 615 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 OR2L5Q8NG80 312 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 OR10R2Q8NGX6 335 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 RPLP0P6Q8NHW5 317 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 RNASE8Q8TDE3 154 aaKnown RBP3.47□□□□□ -1.85
MCF2-210ENST00000536274 GPBAR1Q8TDU6 330 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 ST7LQ8TDW4 575 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 TCTEX1D2Q8WW35 142 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 GAL3ST3Q96A11 431 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 CPNE4Q96A23 557 aaPredicted RBP3.47□□□□□ -1.85
MCF2-210ENST00000536274 FOXRED1Q96CU9 486 aaPredicted RBP3.47□□□□□ -1.85
MCF2-210ENST00000536274 TCEAL4Q96EI5 215 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 C5orf34Q96MH7 638 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 ZNF599Q96NL3 588 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 CCDC115Q96NT0 180 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 FCRL5Q96RD9 977 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 OSMRQ99650 979 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 YIPF4Q9BSR8 244 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 TTTY10Q9BZA0 68 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 DPY30Q9C005 99 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 GABARAPL1Q9H0R8 117 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 SLITRK2Q9H156 845 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 NXF3Q9H4D5 531 aaKnown RBP3.47□□□□□ -1.85
MCF2-210ENST00000536274 NT5DC2Q9H857 520 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 RPS10P5Q9NQ39 176 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 CTPS2Q9NRF8 586 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 TVP23BQ9NYZ1 205 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 ZNF629Q9UEG4 869 aaPredicted RBP3.47□□□□□ -1.85
MCF2-210ENST00000536274 SIX4Q9UIU6 781 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 RCE1Q9Y256 329 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 RASD1Q9Y272 281 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 CHD3Q12873 2000 aaKnown RBP3.47□□□□□ -1.85
MCF2-210ENST00000536274 PLXNA3P51805 1871 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 LOC100509620A0A075B734 347 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 TMEM72A0PK05 275 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 CPED1A4D0V7 1026 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 HEPACAM2A8MVW5 462 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 C5orf67F2Z3F1 127 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 IFRD1O00458 451 aaPredicted RBP3.47□□□□□ -1.85
MCF2-210ENST00000536274 CASC3O15234 703 aaKnown RBP3.47□□□□□ -1.85
MCF2-210ENST00000536274 TLX2O43763 284 aaPredicted RBP3.47□□□□□ -1.85
MCF2-210ENST00000536274 FADS1O60427 444 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 MMP2P08253 660 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 LIPCP11150 499 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 LAMP1P11279 417 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 TBXA2RP21731 343 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 KDELR2P33947 212 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 IRS1P35568 1242 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 PSMD4P55036 377 aaKnown RBP3.47□□□□□ -1.85
MCF2-210ENST00000536274 CDH4P55283 916 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 CARD18P57730 90 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 GMFBP60983 142 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 GABREP78334 506 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 BTG2P78543 158 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 SLC6A3Q01959 620 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 ZNF155Q12901 538 aaPredicted RBP3.47□□□□□ -1.85
MCF2-210ENST00000536274 MTMR1Q13613 665 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 KRT33BQ14525 404 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 TMEM132DQ14C87 1099 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 UBXN2BQ14CS0 331 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 CCL14Q16627 93 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 RNF151Q2KHN1 245 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 C4orf48Q5BLP8 95 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 ZRANB3Q5FWF4 1079 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 XKR7Q5GH72 579 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 COQ5Q5HYK3 327 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 ZNF667Q5HYK9 610 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 AADACL4Q5VUY2 407 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 PLBD1Q6P4A8 553 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 NXPE4Q6UWF7 544 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.47□□□□□ -1.85
MCF2-210ENST00000536274 RANBP3LQ86VV4 465 aaPredicted RBP3.47□□□□□ -1.85
MCF2-210ENST00000536274 LAS2Q8IYD9 372 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 CDK20Q8IZL9 346 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 DEFB106AQ8N104 65 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 CLDN22Q8N7P3 220 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 NPRL2Q8WTW4 380 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 VOPP1Q96AW1 172 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 C7orf34Q96L11 122 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 NECAB3Q96P71 396 aaPredicted RBP3.47□□□□□ -1.85
MCF2-210ENST00000536274 FAM193BQ96PV7 902 aaPredicted RBP3.47□□□□□ -1.85
MCF2-210ENST00000536274 TAAR1Q96RJ0 339 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 PKP4Q99569 1192 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 TBX5Q99593 518 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 CPPED1Q9BRF8 314 aaPredicted RBP3.47□□□□□ -1.85
MCF2-210ENST00000536274 ZNF471Q9BX82 626 aaPredicted RBP3.47□□□□□ -1.85
MCF2-210ENST00000536274 EBPLQ9BY08 206 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 GABARAPL3Q9BY60 117 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 GPR61Q9BZJ8 451 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 MFFQ9GZY8 342 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 PARP12Q9H0J9 701 aaKnown RBP3.47□□□□□ -1.85
MCF2-210ENST00000536274 MTG2Q9H4K7 406 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 WDR26Q9H7D7 661 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 BRD9Q9H8M2 597 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms