RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 LDB3O75112 727 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 MT-ND5P03915 603 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 IFI6P09912 130 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 FUT1P19526 365 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 ID2Q02363 134 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 AMZ1Q400G9 498 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 KLHL12Q53G59 568 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 PRRT3Q5FWE3 981 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 MANEAQ5SRI9 462 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 IDNKQ5T6J7 187 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 ZNF613Q6PF04 617 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 OR4N4Q8N0Y3 316 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 LILRB4Q8NHJ6 448 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 RSC1A1Q92681 617 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 RERGQ96A58 199 aaPredicted RBP14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 ART5Q96L15 291 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 MYADMQ96S97 322 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 ZFYVE21Q9BQ24 234 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 NDC1Q9BTX1 674 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 TMEM106CQ9BVX2 250 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 IFT27Q9BW83 186 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 HCAR1Q9BXC0 346 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 TMEM168Q9H0V1 697 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 EVA1AQ9H8M9 152 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 IL21RQ9HBE5 538 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 CYSLTR2Q9NS75 346 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 TMEM74BQ9NUR3 256 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 SLC35A3Q9Y2D2 325 aa14.86□□□□□ -0.03
CHMP1A-202ENST00000535997 A0A1W2PQF6 199 aa14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 SCO2O43819 266 aa14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 PTP4A3O75365 173 aa14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 POLR2CP19387 275 aaPredicted RBP14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 ELK1P19419 428 aa14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 NT5EP21589 574 aa14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 CAPZA2P47755 286 aa14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 PRICKLE4Q2TBC4 344 aa14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 TPRA1Q86W33 373 aa14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 NR2C2APQ86WQ0 139 aa14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 LRRC28Q86X40 367 aaPredicted RBP14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 LIX1LQ8IVB5 337 aa14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 TMEM99Q8N816 258 aa14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 NLGN4YQ8NFZ3 816 aaPredicted RBP14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 OR10H4Q8NGA5 316 aa14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 OR5M3Q8NGP4 307 aa14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 OR4C6Q8NH72 309 aa14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 ZFPM2Q8WW38 1151 aa14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 RPP25Q9BUL9 199 aaKnown RBP14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 IGFLR1Q9H665 355 aa14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 TMEM27Q9HBJ8 222 aa14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 POLE3Q9NRF9 147 aa14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 C14orf105Q9NVL8 296 aa14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 ACTR10Q9NZ32 417 aa14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 NLKQ9UBE8 527 aa14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 NCKAP1Q9Y2A7 1128 aa14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 UNC80Q8N2C7 3258 aa14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 ZC3H12DA2A288 527 aaKnown RBP14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 CYR61O00622 381 aa14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 TNFRSF10CO14798 259 aa14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 FGF17O60258 216 aa14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 BRINP1O60477 761 aa14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 SLC43A1O75387 559 aa14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 SOX30O94993 753 aa14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 SAGP10523 405 aaPredicted RBP14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 CLDN20P56880 219 aa14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 SHC2P98077 582 aa14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 CD83Q01151 205 aa14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 THSD4Q6ZMP0 1018 aa14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 BMFQ96LC9 184 aa14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 TBX5Q99593 518 aa14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 ZNF559Q9BR84 538 aa14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 SLA2Q9H6Q3 261 aa14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 HAO2Q9NYQ3 351 aa14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 EXTL2Q9UBQ6 330 aa14.85□□□□□ -0.03
CHMP1A-202ENST00000535997 OR6C74A6NCV1 312 aa14.84□□□□□ -0.03
CHMP1A-202ENST00000535997 ZNF860A6NHJ4 632 aa14.84□□□□□ -0.03
CHMP1A-202ENST00000535997 H0Y8X5 98 aa14.84□□□□□ -0.03
CHMP1A-202ENST00000535997 H0YGG7 62 aa14.84□□□□□ -0.03
CHMP1A-202ENST00000535997 DVL2O14641 736 aa14.84□□□□□ -0.03
CHMP1A-202ENST00000535997 ORC5O43913 435 aa14.84□□□□□ -0.03
CHMP1A-202ENST00000535997 REM1O75628 298 aa14.84□□□□□ -0.03
CHMP1A-202ENST00000535997 SBK2P0C263 348 aa14.84□□□□□ -0.03
CHMP1A-202ENST00000535997 CHRNB1P11230 501 aa14.84□□□□□ -0.03
CHMP1A-202ENST00000535997 DRD5P21918 477 aa14.84□□□□□ -0.03
CHMP1A-202ENST00000535997 TALDO1P37837 337 aa14.84□□□□□ -0.03
CHMP1A-202ENST00000535997 RFX3P48380 749 aa14.84□□□□□ -0.03
CHMP1A-202ENST00000535997 TAS2R43P59537 309 aa14.84□□□□□ -0.03
CHMP1A-202ENST00000535997 ARF3P61204 181 aaPredicted RBP14.84□□□□□ -0.03
CHMP1A-202ENST00000535997 CSTF1Q05048 431 aaKnown RBP14.84□□□□□ -0.03
CHMP1A-202ENST00000535997 MGAT2Q10469 447 aa14.84□□□□□ -0.03
CHMP1A-202ENST00000535997 FAM109BQ6ICB4 259 aaPredicted RBP14.84□□□□□ -0.03
CHMP1A-202ENST00000535997 ZNF438Q7Z4V0 828 aa14.84□□□□□ -0.03
CHMP1A-202ENST00000535997 ZNF655Q8N720 491 aaPredicted RBP14.84□□□□□ -0.03
CHMP1A-202ENST00000535997 OR10G6Q8NH81 332 aa14.84□□□□□ -0.03
CHMP1A-202ENST00000535997 SLC2A12Q8TD20 617 aa14.84□□□□□ -0.03
CHMP1A-202ENST00000535997 SIPA1Q96FS4 1042 aa14.84□□□□□ -0.03
CHMP1A-202ENST00000535997 CDCA3Q99618 268 aaPredicted RBP14.84□□□□□ -0.03
CHMP1A-202ENST00000535997 TRPV5Q9NQA5 729 aa14.84□□□□□ -0.03
CHMP1A-202ENST00000535997 BAIAP2Q9UQB8 552 aa14.84□□□□□ -0.03
CHMP1A-202ENST00000535997 CLCA3PQ9Y6N3 262 aa14.84□□□□□ -0.03
CHMP1A-202ENST00000535997 RIIAD1A6NNX1 92 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms