RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 SLC35A3Q9Y2D2 325 aa11.52□□□□□ -0.57
DDB1-207ENST00000535967 AP3M1Q9Y2T2 418 aa11.52□□□□□ -0.57
DDB1-207ENST00000535967 L3MBTL1Q9Y468 752 aa11.52□□□□□ -0.57
DDB1-207ENST00000535967 HRH3Q9Y5N1 445 aa11.52□□□□□ -0.57
DDB1-207ENST00000535967 KIAA1549Q9HCM3 1950 aa11.51□□□□□ -0.57
DDB1-207ENST00000535967 PHF3Q92576 2039 aaKnown RBP11.51□□□□□ -0.57
DDB1-207ENST00000535967 TRGV5A0A0B4J1U4 118 aa11.51□□□□□ -0.57
DDB1-207ENST00000535967 OR14I1A6ND48 311 aa11.51□□□□□ -0.57
DDB1-207ENST00000535967 SERINC4A6NH21 518 aa11.51□□□□□ -0.57
DDB1-207ENST00000535967 AGAP5A6NIR3 686 aa11.51□□□□□ -0.57
DDB1-207ENST00000535967 C5orf58C9J3I9 102 aa11.51□□□□□ -0.57
DDB1-207ENST00000535967 AQP7O14520 342 aa11.51□□□□□ -0.57
DDB1-207ENST00000535967 CDC40O60508 579 aaKnown RBP eCLIP11.51□□□□□ -0.57
DDB1-207ENST00000535967 EIF4E2O60573 245 aaKnown RBP11.51□□□□□ -0.57
DDB1-207ENST00000535967 DBIP07108 87 aaKnown RBP11.51□□□□□ -0.57
DDB1-207ENST00000535967 UBL4AP11441 157 aa11.51□□□□□ -0.57
DDB1-207ENST00000535967 GCKP35557 465 aa11.51□□□□□ -0.57
DDB1-207ENST00000535967 CHRNEQ04844 493 aa11.51□□□□□ -0.57
DDB1-207ENST00000535967 CD226Q15762 336 aa11.51□□□□□ -0.57
DDB1-207ENST00000535967 CYP51A1Q16850 503 aa11.51□□□□□ -0.57
DDB1-207ENST00000535967 TRILQ7L0X0 811 aa11.51□□□□□ -0.57
DDB1-207ENST00000535967 SLC30A8Q8IWU4 369 aa11.51□□□□□ -0.57
DDB1-207ENST00000535967 PEX5LQ8IYB4 626 aa11.51□□□□□ -0.57
DDB1-207ENST00000535967 GATSQ8NAP1 163 aa11.51□□□□□ -0.57
DDB1-207ENST00000535967 FAM83FQ8NEG4 500 aaPredicted RBP11.51□□□□□ -0.57
DDB1-207ENST00000535967 NEIL3Q8TAT5 605 aa11.51□□□□□ -0.57
DDB1-207ENST00000535967 PHOSPHO1Q8TCT1 267 aa11.51□□□□□ -0.57
DDB1-207ENST00000535967 DUSP19Q8WTR2 217 aa11.51□□□□□ -0.57
DDB1-207ENST00000535967 WDR60Q8WVS4 1066 aa11.51□□□□□ -0.57
DDB1-207ENST00000535967 TREX2Q9BQ50 279 aaPredicted RBP11.51□□□□□ -0.57
DDB1-207ENST00000535967 SLC39A3Q9BRY0 314 aa11.51□□□□□ -0.57
DDB1-207ENST00000535967 DEFB127Q9H1M4 99 aa11.51□□□□□ -0.57
DDB1-207ENST00000535967 KAT8Q9H7Z6 458 aaKnown RBP11.51□□□□□ -0.57
DDB1-207ENST00000535967 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.51□□□□□ -0.57
DDB1-207ENST00000535967 KCNE5Q9UJ90 142 aa11.51□□□□□ -0.57
DDB1-207ENST00000535967 FBXL2Q9UKC9 423 aa11.51□□□□□ -0.57
DDB1-207ENST00000535967 ANGPT4Q9Y264 503 aa11.51□□□□□ -0.57
DDB1-207ENST00000535967 LIPGQ9Y5X9 500 aa11.51□□□□□ -0.57
DDB1-207ENST00000535967 NCOA6Q14686 2063 aaPredicted RBP11.5□□□□□ -0.57
DDB1-207ENST00000535967 CENPVL1A0A0U1RR11 272 aa11.5□□□□□ -0.57
DDB1-207ENST00000535967 AIM2O14862 343 aa11.5□□□□□ -0.57
DDB1-207ENST00000535967 ZNF264O43296 627 aa11.5□□□□□ -0.57
DDB1-207ENST00000535967 TRAPPC6AO75865 159 aa11.5□□□□□ -0.57
DDB1-207ENST00000535967 THBS1P07996 1170 aa11.5□□□□□ -0.57
DDB1-207ENST00000535967 CELA3AP09093 270 aa11.5□□□□□ -0.57
DDB1-207ENST00000535967 ETS2P15036 469 aa11.5□□□□□ -0.57
DDB1-207ENST00000535967 DPP4P27487 766 aa11.5□□□□□ -0.57
DDB1-207ENST00000535967 NUDT2P50583 147 aa11.5□□□□□ -0.57
DDB1-207ENST00000535967 P2RX1P51575 399 aa11.5□□□□□ -0.57
DDB1-207ENST00000535967 CDK6Q00534 326 aa11.5□□□□□ -0.57
DDB1-207ENST00000535967 ZNF117Q03924 483 aa11.5□□□□□ -0.57
DDB1-207ENST00000535967 SCARB2Q14108 478 aa11.5□□□□□ -0.57
DDB1-207ENST00000535967 SELPLGQ14242 412 aa11.5□□□□□ -0.57
DDB1-207ENST00000535967 TOMM20Q15388 145 aa11.5□□□□□ -0.57
DDB1-207ENST00000535967 ZSWIM7Q19AV6 140 aa11.5□□□□□ -0.57
DDB1-207ENST00000535967 GLYR1Q49A26 553 aaPredicted RBP11.5□□□□□ -0.57
DDB1-207ENST00000535967 OR5M10Q6IEU7 315 aa11.5□□□□□ -0.57
DDB1-207ENST00000535967 REEP3Q6NUK4 255 aa11.5□□□□□ -0.57
DDB1-207ENST00000535967 Q6ZPB1 254 aaPredicted RBP11.5□□□□□ -0.57
DDB1-207ENST00000535967 EIF3MQ7L2H7 374 aaKnown RBP11.5□□□□□ -0.57
DDB1-207ENST00000535967 OLIG3Q7RTU3 272 aa11.5□□□□□ -0.57
DDB1-207ENST00000535967 IFNEQ86WN2 208 aa11.5□□□□□ -0.57
DDB1-207ENST00000535967 C10orf111Q8N326 155 aa11.5□□□□□ -0.57
DDB1-207ENST00000535967 C11orf65Q8NCR3 313 aa11.5□□□□□ -0.57
DDB1-207ENST00000535967 HIPK4Q8NE63 616 aa11.5□□□□□ -0.57
DDB1-207ENST00000535967 FAM71CQ8NEG0 241 aa11.5□□□□□ -0.57
DDB1-207ENST00000535967 B4GALNT2Q8NHY0 566 aa11.5□□□□□ -0.57
DDB1-207ENST00000535967 NFKBIDQ8NI38 313 aa11.5□□□□□ -0.57
DDB1-207ENST00000535967 ITLN2Q8WWU7 325 aaPredicted RBP11.5□□□□□ -0.57
DDB1-207ENST00000535967 SARAFQ96BY9 339 aa11.5□□□□□ -0.57
DDB1-207ENST00000535967 C1GALT1C1Q96EU7 318 aa11.5□□□□□ -0.57
DDB1-207ENST00000535967 HOPXQ9BPY8 73 aaPredicted RBP11.5□□□□□ -0.57
DDB1-207ENST00000535967 SLC6A15Q9H2J7 730 aa11.5□□□□□ -0.57
DDB1-207ENST00000535967 DSN1Q9H410 356 aa11.5□□□□□ -0.57
DDB1-207ENST00000535967 LDAHQ9H6V9 325 aa11.5□□□□□ -0.57
DDB1-207ENST00000535967 EXOSC3Q9NQT5 275 aaKnown RBP11.5□□□□□ -0.57
DDB1-207ENST00000535967 TAGLN3Q9UI15 199 aa11.5□□□□□ -0.57
DDB1-207ENST00000535967 IFT52Q9Y366 437 aa11.5□□□□□ -0.57
DDB1-207ENST00000535967 A0A087WZY1 265 aa11.49□□□□□ -0.57
DDB1-207ENST00000535967 B4DXG7 233 aa11.49□□□□□ -0.57
DDB1-207ENST00000535967 FAM47E-STBD1D6RA91 191 aa11.49□□□□□ -0.57
DDB1-207ENST00000535967 GTPBP1O00178 669 aaKnown RBP11.49□□□□□ -0.57
DDB1-207ENST00000535967 BCKDKO14874 412 aa11.49□□□□□ -0.57
DDB1-207ENST00000535967 HCRTR2O43614 444 aa11.49□□□□□ -0.57
DDB1-207ENST00000535967 PGM3O95394 542 aa11.49□□□□□ -0.57
DDB1-207ENST00000535967 CSTAP01040 98 aa11.49□□□□□ -0.57
DDB1-207ENST00000535967 NID1P14543 1247 aa11.49□□□□□ -0.57
DDB1-207ENST00000535967 SNRPBP14678 240 aaKnown RBP11.49□□□□□ -0.57
DDB1-207ENST00000535967 ABOP16442 354 aa11.49□□□□□ -0.57
DDB1-207ENST00000535967 ZNF17P17021 662 aa11.49□□□□□ -0.57
DDB1-207ENST00000535967 SLC6A2P23975 617 aa11.49□□□□□ -0.57
DDB1-207ENST00000535967 PCGF2P35227 344 aa11.49□□□□□ -0.57
DDB1-207ENST00000535967 ZNF41P51814 821 aaPredicted RBP11.49□□□□□ -0.57
DDB1-207ENST00000535967 SKP2Q13309 424 aa11.49□□□□□ -0.57
DDB1-207ENST00000535967 ART3Q13508 389 aa11.49□□□□□ -0.57
DDB1-207ENST00000535967 KRT72Q14CN4 511 aa11.49□□□□□ -0.57
DDB1-207ENST00000535967 MAPK14Q16539 360 aa11.49□□□□□ -0.57
DDB1-207ENST00000535967 LIN52Q52LA3 116 aa11.49□□□□□ -0.57
DDB1-207ENST00000535967 RABL3Q5HYI8 236 aa11.49□□□□□ -0.57
DDB1-207ENST00000535967 NHSL2Q5HYW2 709 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms