RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 SLC7A5P2Q9GIP4 190 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 TINAGL1Q9GZM7 467 aaPredicted RBP6.14□□□□□ -1.43
USP28-202ENST00000535607 POLR2J3Q9H1A7 115 aaKnown RBP6.14□□□□□ -1.43
USP28-202ENST00000535607 ABCG5Q9H222 651 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 GPN1Q9HCN4 374 aaPredicted RBP6.14□□□□□ -1.43
USP28-202ENST00000535607 GALNT9Q9HCQ5 603 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 FGF20Q9NP95 211 aaPredicted RBP6.14□□□□□ -1.43
USP28-202ENST00000535607 FARSBQ9NSD9 589 aaKnown RBP6.14□□□□□ -1.43
USP28-202ENST00000535607 DNAJC11Q9NVH1 559 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 MRPS18AQ9NVS2 196 aaKnown RBP6.14□□□□□ -1.43
USP28-202ENST00000535607 GPRC5BQ9NZH0 403 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 CACNG4Q9UBN1 327 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 AGO1Q9UL18 857 aaKnown RBP6.14□□□□□ -1.43
USP28-202ENST00000535607 VWA8A3KMH1 1905 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 CHD9Q3L8U1 2897 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 MYO16Q9Y6X6 1858 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 PTPRDP23468 1912 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 DOCK4Q8N1I0 1966 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 TEX13CA0A0J9YWL9 993 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 GSAPA4D1B5 854 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 LINC01553A4QN01 128 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 ANKRD66B4E2M5 251 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 H7C2Y5 167 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 L7N2F9 121 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 PCDH17O14917 1159 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 KDELR3O43731 214 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 GMDSO60547 372 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 HPGDSO60760 199 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 FGF18O76093 207 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 LRATO95237 230 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 SLC25A14O95258 325 aaPredicted RBP6.13□□□□□ -1.43
USP28-202ENST00000535607 ECDO95905 644 aaPredicted RBP6.13□□□□□ -1.43
USP28-202ENST00000535607 MPC1LP0DKB6 136 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 CTSAP10619 480 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 ACP2P11117 423 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 JUPP14923 745 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 AHCYP23526 432 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 EVI2BP34910 448 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 CTNNB1P35222 781 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 SLC11A2P49281 568 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 ANXA11P50995 505 aaKnown RBP6.13□□□□□ -1.43
USP28-202ENST00000535607 CDH4P55283 916 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 GMFBP60983 142 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 HOXC5Q00444 222 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 CDK6Q00534 326 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 BDH1Q02338 343 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 TAP2Q03519 686 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 CSTF1Q05048 431 aaKnown RBP6.13□□□□□ -1.43
USP28-202ENST00000535607 ACSM1Q08AH1 577 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 BTN1A1Q13410 526 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 PTPRCAPQ14761 206 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 ZNF169Q14929 603 aaPredicted RBP6.13□□□□□ -1.43
USP28-202ENST00000535607 FCN2Q15485 313 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 CTXN3Q4LDR2 81 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 ARHGAP15Q53QZ3 475 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 FBLN7Q53RD9 439 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.13□□□□□ -1.43
USP28-202ENST00000535607 ARMC12Q5T9G4 340 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 BCL2L15Q5TBC7 163 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 METTL11BQ5VVY1 283 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 SHEQ5VZ18 495 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 ZDHHC20Q5W0Z9 365 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 B3GNTL1Q67FW5 361 aaPredicted RBP6.13□□□□□ -1.43
USP28-202ENST00000535607 TPGS2Q68CL5 300 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 TMEM81Q6P7N7 255 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 CD200R1LQ6Q8B3 271 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 Q6ZPB1 254 aaPredicted RBP6.13□□□□□ -1.43
USP28-202ENST00000535607 PGAP1Q75T13 922 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 RTL10Q7L3V2 364 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 TMEM173Q86WV6 379 aaPredicted RBP6.13□□□□□ -1.43
USP28-202ENST00000535607 TMEM17Q86X19 198 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 NAXDQ8IW45 347 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 TDHQ8IZJ6 230 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 UBE2J2Q8N2K1 259 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 PGBD5Q8N414 524 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 TOMM5Q8N4H5 51 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 EID2Q8N6I1 236 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 CAMKVQ8NCB2 501 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 TTLQ8NG68 377 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 OR52P1PQ8NH57 321 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 OR56B4Q8NH76 319 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 GOT1L1Q8NHS2 421 aaPredicted RBP6.13□□□□□ -1.43
USP28-202ENST00000535607 RPLP0P6Q8NHW5 317 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 NEIL3Q8TAT5 605 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 DVL3Q92997 716 aaPredicted RBP6.13□□□□□ -1.43
USP28-202ENST00000535607 UPRTQ96BW1 309 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 RNFT2Q96EX2 444 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 SCMH1Q96GD3 660 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 MRGPRX1Q96LB2 322 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 APOLD1Q96LR9 279 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 IL4I1Q96RQ9 567 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 ZNF607Q96SK3 696 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 COPS8Q99627 209 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 PKMYT1Q99640 499 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 ATF6BQ99941 703 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 RTP3Q9BQQ7 232 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 KATNB1Q9BVA0 655 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 ZBP1Q9H171 429 aa6.13□□□□□ -1.43
USP28-202ENST00000535607 TTYH1Q9H313 450 aaPredicted RBP6.13□□□□□ -1.43
USP28-202ENST00000535607 NMNAT1Q9HAN9 279 aaPredicted RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms