RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 MCMBPQ9BTE3 642 aa7.19□□□□□ -1.26
CLIP1-206ENST00000535290 ALG9Q9H6U8 611 aa7.19□□□□□ -1.26
CLIP1-206ENST00000535290 POPDC3Q9HBV1 291 aa7.19□□□□□ -1.26
CLIP1-206ENST00000535290 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.19□□□□□ -1.26
CLIP1-206ENST00000535290 CA10Q9NS85 328 aa7.19□□□□□ -1.26
CLIP1-206ENST00000535290 TAS2R9Q9NYW1 312 aa7.19□□□□□ -1.26
CLIP1-206ENST00000535290 UTS2RQ9UKP6 389 aa7.19□□□□□ -1.26
CLIP1-206ENST00000535290 MTO1Q9Y2Z2 717 aaKnown RBP7.19□□□□□ -1.26
CLIP1-206ENST00000535290 A0A1W2PNR3 127 aa7.18□□□□□ -1.26
CLIP1-206ENST00000535290 GXYLT2A0PJZ3 443 aa7.18□□□□□ -1.26
CLIP1-206ENST00000535290 ZNF724A8MTY0 619 aa7.18□□□□□ -1.26
CLIP1-206ENST00000535290 SUPT3HB4E1H0 165 aa7.18□□□□□ -1.26
CLIP1-206ENST00000535290 ALG1L2C9J202 215 aa7.18□□□□□ -1.26
CLIP1-206ENST00000535290 ZNF195O14628 629 aa7.18□□□□□ -1.26
CLIP1-206ENST00000535290 GUCY1B2O75343 617 aa7.18□□□□□ -1.26
CLIP1-206ENST00000535290 SUPT3HO75486 399 aa7.18□□□□□ -1.26
CLIP1-206ENST00000535290 ITGA5P08648 1049 aa7.18□□□□□ -1.26
CLIP1-206ENST00000535290 IGFBP1P08833 259 aaPredicted RBP7.18□□□□□ -1.26
CLIP1-206ENST00000535290 LINGO3P0C6S8 592 aa7.18□□□□□ -1.26
CLIP1-206ENST00000535290 GAAP10253 952 aa7.18□□□□□ -1.26
CLIP1-206ENST00000535290 MDKP21741 143 aaPredicted RBP7.18□□□□□ -1.26
CLIP1-206ENST00000535290 PRTN3P24158 256 aa7.18□□□□□ -1.26
CLIP1-206ENST00000535290 GCH1P30793 250 aa7.18□□□□□ -1.26
CLIP1-206ENST00000535290 NTF4P34130 210 aa7.18□□□□□ -1.26
CLIP1-206ENST00000535290 ELK3P41970 407 aa7.18□□□□□ -1.26
CLIP1-206ENST00000535290 IL13RA1P78552 427 aa7.18□□□□□ -1.26
CLIP1-206ENST00000535290 SLC18A2Q05940 514 aa7.18□□□□□ -1.26
CLIP1-206ENST00000535290 GALNT1Q10472 559 aaPredicted RBP7.18□□□□□ -1.26
CLIP1-206ENST00000535290 FOXF1Q12946 379 aa7.18□□□□□ -1.26
CLIP1-206ENST00000535290 EFNB3Q15768 340 aa7.18□□□□□ -1.26
CLIP1-206ENST00000535290 VHLLQ6RSH7 139 aa7.18□□□□□ -1.26
CLIP1-206ENST00000535290 PAGE2Q7Z2X7 111 aa7.18□□□□□ -1.26
CLIP1-206ENST00000535290 ISCA2Q86U28 154 aa7.18□□□□□ -1.26
CLIP1-206ENST00000535290 L3MBTL4Q8NA19 623 aa7.18□□□□□ -1.26
CLIP1-206ENST00000535290 OR4C3Q8NH37 302 aa7.18□□□□□ -1.26
CLIP1-206ENST00000535290 OR51F2Q8NH61 342 aa7.18□□□□□ -1.26
CLIP1-206ENST00000535290 MAIP1Q8WWC4 291 aa7.18□□□□□ -1.26
CLIP1-206ENST00000535290 NEU4Q8WWR8 484 aaPredicted RBP7.18□□□□□ -1.26
CLIP1-206ENST00000535290 LRRC58Q96CX6 371 aa7.18□□□□□ -1.26
CLIP1-206ENST00000535290 UBXN10Q96LJ8 280 aa7.18□□□□□ -1.26
CLIP1-206ENST00000535290 C1orf147Q96MC9 270 aaPredicted RBP7.18□□□□□ -1.26
CLIP1-206ENST00000535290 CDK15Q96Q40 435 aa7.18□□□□□ -1.26
CLIP1-206ENST00000535290 TMPRSS13Q9BYE2 586 aa7.18□□□□□ -1.26
CLIP1-206ENST00000535290 RACGAP1Q9H0H5 632 aa7.18□□□□□ -1.26
CLIP1-206ENST00000535290 MMP27Q9H306 513 aa7.18□□□□□ -1.26
CLIP1-206ENST00000535290 RHOJQ9H4E5 214 aa7.18□□□□□ -1.26
CLIP1-206ENST00000535290 G6PC2Q9NQR9 355 aa7.18□□□□□ -1.26
CLIP1-206ENST00000535290 TAS2R16Q9NYV7 291 aa7.18□□□□□ -1.26
CLIP1-206ENST00000535290 AHSPQ9NZD4 102 aa7.18□□□□□ -1.26
CLIP1-206ENST00000535290 NUDT4Q9NZJ9 180 aa7.18□□□□□ -1.26
CLIP1-206ENST00000535290 CHMP2BQ9UQN3 213 aa7.18□□□□□ -1.26
CLIP1-206ENST00000535290 ACOT9Q9Y305 439 aa7.18□□□□□ -1.26
CLIP1-206ENST00000535290 ANGPTL3Q9Y5C1 460 aa7.18□□□□□ -1.26
CLIP1-206ENST00000535290 TRAV20A0A0B4J274 112 aa7.17□□□□□ -1.26
CLIP1-206ENST00000535290 UGDHO60701 494 aa7.17□□□□□ -1.26
CLIP1-206ENST00000535290 CYTIPO60759 359 aa7.17□□□□□ -1.26
CLIP1-206ENST00000535290 LTA4HP09960 611 aaKnown RBP7.17□□□□□ -1.26
CLIP1-206ENST00000535290 MTHFD2P13995 350 aa7.17□□□□□ -1.26
CLIP1-206ENST00000535290 PRIM2P49643 509 aa7.17□□□□□ -1.26
CLIP1-206ENST00000535290 SLC12A2P55011 1212 aa7.17□□□□□ -1.26
CLIP1-206ENST00000535290 RAC3P60763 192 aa7.17□□□□□ -1.26
CLIP1-206ENST00000535290 IL1RL1Q01638 556 aa7.17□□□□□ -1.26
CLIP1-206ENST00000535290 MGAT5Q09328 741 aa7.17□□□□□ -1.26
CLIP1-206ENST00000535290 DLG1Q12959 904 aa7.17□□□□□ -1.26
CLIP1-206ENST00000535290 TRADDQ15628 312 aa7.17□□□□□ -1.26
CLIP1-206ENST00000535290 TSNAXIP1Q2TAA8 658 aa7.17□□□□□ -1.26
CLIP1-206ENST00000535290 SGO1Q5FBB7 561 aa7.17□□□□□ -1.26
CLIP1-206ENST00000535290 C9orf135Q5VTT2 229 aa7.17□□□□□ -1.26
CLIP1-206ENST00000535290 FAM219BQ5XKK7 198 aa7.17□□□□□ -1.26
CLIP1-206ENST00000535290 STEAP4Q687X5 459 aa7.17□□□□□ -1.26
CLIP1-206ENST00000535290 OR7E24Q6IFN5 339 aa7.17□□□□□ -1.26
CLIP1-206ENST00000535290 LEG1Q6P5S2 330 aa7.17□□□□□ -1.26
CLIP1-206ENST00000535290 Q6ZPA2 131 aa7.17□□□□□ -1.26
CLIP1-206ENST00000535290 TEX29Q8N6K0 151 aa7.17□□□□□ -1.26
CLIP1-206ENST00000535290 SIGLECL1Q8N7X8 197 aa7.17□□□□□ -1.26
CLIP1-206ENST00000535290 FBXO27Q8NI29 283 aa7.17□□□□□ -1.26
CLIP1-206ENST00000535290 STAG3L4Q8TBR4 150 aa7.17□□□□□ -1.26
CLIP1-206ENST00000535290 ZFP90Q8TF47 636 aa7.17□□□□□ -1.26
CLIP1-206ENST00000535290 MAGOHBQ96A72 148 aaKnown RBP7.17□□□□□ -1.26
CLIP1-206ENST00000535290 EXOSC8Q96B26 276 aaKnown RBP7.17□□□□□ -1.26
CLIP1-206ENST00000535290 MRGPRX4Q96LA9 322 aa7.17□□□□□ -1.26
CLIP1-206ENST00000535290 ATOH8Q96SQ7 321 aa7.17□□□□□ -1.26
CLIP1-206ENST00000535290 DOK1Q99704 481 aa7.17□□□□□ -1.26
CLIP1-206ENST00000535290 FAIM2Q9BWQ8 316 aa7.17□□□□□ -1.26
CLIP1-206ENST00000535290 KRTAP17-1Q9BYP8 105 aa7.17□□□□□ -1.26
CLIP1-206ENST00000535290 IPPKQ9H8X2 491 aa7.17□□□□□ -1.26
CLIP1-206ENST00000535290 NTN4Q9HB63 628 aa7.17□□□□□ -1.26
CLIP1-206ENST00000535290 Q9N2J8 555 aa7.17□□□□□ -1.26
CLIP1-206ENST00000535290 SLC17A5Q9NRA2 495 aa7.17□□□□□ -1.26
CLIP1-206ENST00000535290 ASB6Q9NWX5 421 aa7.17□□□□□ -1.26
CLIP1-206ENST00000535290 ZDHHC2Q9UIJ5 367 aa7.17□□□□□ -1.26
CLIP1-206ENST00000535290 ICAM5Q9UMF0 924 aa7.17□□□□□ -1.26
CLIP1-206ENST00000535290 CORINQ9Y5Q5 1042 aa7.17□□□□□ -1.26
CLIP1-206ENST00000535290 TENM3Q9P273 2699 aa7.16□□□□□ -1.26
CLIP1-206ENST00000535290 SH3PXD2BA1X283 911 aa7.16□□□□□ -1.26
CLIP1-206ENST00000535290 DNAJC9-AS1A6NH13 148 aa7.16□□□□□ -1.26
CLIP1-206ENST00000535290 GJE1A6NN92 205 aa7.16□□□□□ -1.26
CLIP1-206ENST00000535290 hCG_2039718K7EN88 272 aa7.16□□□□□ -1.26
CLIP1-206ENST00000535290 PDLIM1O00151 329 aa7.16□□□□□ -1.26
CLIP1-206ENST00000535290 KLF11O14901 512 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms