RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 STOML1Q9UBI4 398 aa9□□□□□ -0.97
CLSTN3-203ENST00000534830 HAO1Q9UJM8 370 aa9□□□□□ -0.97
CLSTN3-203ENST00000534830 ICAM5Q9UMF0 924 aa9□□□□□ -0.97
CLSTN3-203ENST00000534830 ACTL7BQ9Y614 415 aa9□□□□□ -0.97
CLSTN3-203ENST00000534830 USF3Q68DE3 2245 aa8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 ESPNB1AK53 854 aa8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 C16orf97H3BN30 126 aa8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 ETV2O00321 342 aaPredicted RBP8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 EIF1AYO14602 144 aaKnown RBP8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 TNFSF11O14788 317 aa8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 BIRC5O15392 142 aa8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 OIP5O43482 229 aa8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 DNAJA2O60884 412 aa8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 SKAP2O75563 359 aaPredicted RBP8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 NTN1O95631 604 aa8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 TP53P04637 393 aaPredicted RBP8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 CPOXP36551 454 aa8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 EIF1AXP47813 144 aaKnown RBP8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 PTH2RP49190 550 aa8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 P2RX1P51575 399 aa8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 ATP12AP54707 1039 aa8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 NR1H2P55055 460 aa8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 SIRPAP78324 504 aa8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 ZNF117Q03924 483 aa8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 ZNF844Q08AG5 666 aa8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 SGCBQ16585 318 aa8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 DCST2Q5T1A1 773 aa8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 CBLN3Q6UW01 205 aa8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 HIPK1Q86Z02 1210 aa8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 NUDCD3Q8IVD9 361 aa8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 ZNF781Q8N8C0 355 aa8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 OR6K3Q8NGY3 331 aa8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 OR2V1Q8NHB1 315 aa8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 GPR119Q8TDV5 335 aa8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 MOAP1Q96BY2 351 aa8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 TUBGCP3Q96CW5 907 aa8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 OR7D2Q96RA2 312 aa8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 SDF2Q99470 211 aa8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 SORT1Q99523 831 aa8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 PRPF18Q99633 342 aaKnown RBP8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 SLC39A3Q9BRY0 314 aa8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 DUSP26Q9BV47 211 aa8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 SERHL2Q9H4I8 314 aa8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 YAE1D1Q9NRH1 226 aa8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 GLRX2Q9NS18 164 aa8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 KLHL28Q9NXS3 571 aa8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 PROCRQ9UNN8 238 aa8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 SNX8Q9Y5X2 465 aa8.99□□□□□ -0.97
CLSTN3-203ENST00000534830 NPIPA5A0A0B4J1W7 369 aa8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 NPIPA7E9PJI5 369 aa8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 RNASET2O00584 256 aaKnown RBP8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 ANKRD28O15084 1053 aa8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 CXCL13O43927 109 aa8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 OPN1LWP04000 364 aa8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 SERPINE1P05121 402 aa8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 THBDP07204 575 aa8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 KRT16P08779 473 aa8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 NPIPA8P0DM63 369 aa8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 HPGDP15428 266 aa8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 ELK4P28324 431 aa8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 SHC1P29353 583 aa8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 EIF1P41567 113 aaKnown RBP8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 ZNF41P51814 821 aaPredicted RBP8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 SUMO3P55854 103 aaPredicted RBP8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 ABCE1P61221 599 aaKnown RBP8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 PHC1P78364 1004 aa8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 MAD2L1Q13257 205 aaPredicted RBP8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 TNK1Q13470 666 aa8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 TP53BP2Q13625 1128 aa8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 TOMM34Q15785 309 aaPredicted RBP8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 CHRFAM7AQ494W8 412 aa8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 SLC25A53Q5H9E4 307 aa8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 STAC2Q6ZMT1 411 aa8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 ZNF550Q7Z398 422 aa8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 LILRA2Q8N149 483 aa8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 OR8J2Q8NGG1 315 aa8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 PPP1R14CQ8TAE6 165 aa8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 PHOSPHO1Q8TCT1 267 aa8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 MIPOL1Q8TD10 442 aa8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 ADAMTS15Q8TE58 950 aa8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 JADE3Q92613 823 aa8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 OSTF1Q92882 214 aa8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 SH3YL1Q96HL8 342 aaPredicted RBP8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 PKNOX2Q96KN3 472 aa8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 KLHL15Q96M94 604 aa8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 PARD6BQ9BYG5 372 aa8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 GSX2Q9BZM3 304 aa8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 NMUR2Q9GZQ4 415 aa8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 AKTIPQ9H8T0 292 aa8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 ZNF226Q9NYT6 803 aa8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 NOP53Q9NZM5 478 aaKnown RBP8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 KCNE5Q9UJ90 142 aa8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 RAB21Q9UL25 225 aa8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 MCTS1Q9ULC4 181 aaKnown RBP8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 DTNAQ9Y4J8 743 aa8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 GPC6Q9Y625 555 aaPredicted RBP8.98□□□□□ -0.97
CLSTN3-203ENST00000534830 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.97□□□□□ -0.97
CLSTN3-203ENST00000534830 RNF223E7ERA6 249 aa8.97□□□□□ -0.97
CLSTN3-203ENST00000534830 ZNF195O14628 629 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms