RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 FRS3O43559 492 aa12.67□□□□□ -0.38
VPS11-205ENST00000534551 GUSBP08236 651 aa12.67□□□□□ -0.38
VPS11-205ENST00000534551 LINGO3P0C6S8 592 aa12.67□□□□□ -0.38
VPS11-205ENST00000534551 PPIBP23284 216 aaKnown RBP12.67□□□□□ -0.38
VPS11-205ENST00000534551 ADSLP30566 484 aaPredicted RBP12.67□□□□□ -0.38
VPS11-205ENST00000534551 MAGEA8P43361 318 aa12.67□□□□□ -0.38
VPS11-205ENST00000534551 P2RX1P51575 399 aa12.67□□□□□ -0.38
VPS11-205ENST00000534551 ZNF41P51814 821 aaPredicted RBP12.67□□□□□ -0.38
VPS11-205ENST00000534551 CASP6P55212 293 aa12.67□□□□□ -0.38
VPS11-205ENST00000534551 CLDN20P56880 219 aa12.67□□□□□ -0.38
VPS11-205ENST00000534551 NUP107P57740 925 aa12.67□□□□□ -0.38
VPS11-205ENST00000534551 KCNJ10P78508 379 aa12.67□□□□□ -0.38
VPS11-205ENST00000534551 CDK6Q00534 326 aa12.67□□□□□ -0.38
VPS11-205ENST00000534551 SCARB2Q14108 478 aa12.67□□□□□ -0.38
VPS11-205ENST00000534551 QPRTQ15274 297 aa12.67□□□□□ -0.38
VPS11-205ENST00000534551 ACSF3Q4G176 576 aaPredicted RBP12.67□□□□□ -0.38
VPS11-205ENST00000534551 COQ5Q5HYK3 327 aa12.67□□□□□ -0.38
VPS11-205ENST00000534551 NHSL2Q5HYW2 709 aa12.67□□□□□ -0.38
VPS11-205ENST00000534551 C1orf185Q5T7R7 199 aa12.67□□□□□ -0.38
VPS11-205ENST00000534551 RPTNQ6XPR3 784 aa12.67□□□□□ -0.38
VPS11-205ENST00000534551 SEM1Q6ZVN7 128 aa12.67□□□□□ -0.38
VPS11-205ENST00000534551 OR52P1PQ8NH57 321 aa12.67□□□□□ -0.38
VPS11-205ENST00000534551 OR10A6Q8NH74 314 aa12.67□□□□□ -0.38
VPS11-205ENST00000534551 SSC4DQ8WTU2 575 aa12.67□□□□□ -0.38
VPS11-205ENST00000534551 THUMPD3Q9BV44 507 aaKnown RBP12.67□□□□□ -0.38
VPS11-205ENST00000534551 PRDM14Q9GZV8 571 aa12.67□□□□□ -0.38
VPS11-205ENST00000534551 TP63Q9H3D4 680 aaPredicted RBP12.67□□□□□ -0.38
VPS11-205ENST00000534551 ADAM21Q9UKJ8 722 aa12.67□□□□□ -0.38
VPS11-205ENST00000534551 ARL2BPQ9Y2Y0 163 aa12.67□□□□□ -0.38
VPS11-205ENST00000534551 ZNF337Q9Y3M9 751 aa12.67□□□□□ -0.38
VPS11-205ENST00000534551 SPTBN1Q01082 2364 aaKnown RBP12.66□□□□□ -0.38
VPS11-205ENST00000534551 A0A1B0GUH1 482 aa12.66□□□□□ -0.38
VPS11-205ENST00000534551 CCT8L1PA6NM43 557 aa12.66□□□□□ -0.38
VPS11-205ENST00000534551 FIGNL2A6NMB9 653 aa12.66□□□□□ -0.38
VPS11-205ENST00000534551 C5orf58C9J3I9 102 aa12.66□□□□□ -0.38
VPS11-205ENST00000534551 H0Y3Z8 333 aa12.66□□□□□ -0.38
VPS11-205ENST00000534551 PGM3O95394 542 aa12.66□□□□□ -0.38
VPS11-205ENST00000534551 ACTL6AO96019 429 aa12.66□□□□□ -0.38
VPS11-205ENST00000534551 OPN1SWP03999 348 aa12.66□□□□□ -0.38
VPS11-205ENST00000534551 GKN3PP0CG01 181 aa12.66□□□□□ -0.38
VPS11-205ENST00000534551 PEPDP12955 493 aa12.66□□□□□ -0.38
VPS11-205ENST00000534551 NID1P14543 1247 aa12.66□□□□□ -0.38
VPS11-205ENST00000534551 PRKCAP17252 672 aa12.66□□□□□ -0.38
VPS11-205ENST00000534551 POU3F2P20265 443 aaPredicted RBP12.66□□□□□ -0.38
VPS11-205ENST00000534551 PSMA4P25789 261 aaKnown RBP12.66□□□□□ -0.38
VPS11-205ENST00000534551 ACVR2AP27037 513 aa12.66□□□□□ -0.38
VPS11-205ENST00000534551 RYKP34925 604 aa12.66□□□□□ -0.38
VPS11-205ENST00000534551 NUDT2P50583 147 aa12.66□□□□□ -0.38
VPS11-205ENST00000534551 GZMMP51124 257 aa12.66□□□□□ -0.38
VPS11-205ENST00000534551 SUCLG1P53597 346 aaKnown RBP12.66□□□□□ -0.38
VPS11-205ENST00000534551 SUMO3P55854 103 aaPredicted RBP12.66□□□□□ -0.38
VPS11-205ENST00000534551 CLDN15P56746 228 aa12.66□□□□□ -0.38
VPS11-205ENST00000534551 EEF1A1P68104 462 aaKnown RBP12.66□□□□□ -0.38
VPS11-205ENST00000534551 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.66□□□□□ -0.38
VPS11-205ENST00000534551 GLIPR1L2Q4G1C9 344 aa12.66□□□□□ -0.38
VPS11-205ENST00000534551 NANOGP8Q6NSW7 305 aa12.66□□□□□ -0.38
VPS11-205ENST00000534551 EIF3MQ7L2H7 374 aaKnown RBP12.66□□□□□ -0.38
VPS11-205ENST00000534551 NET1Q7Z628 596 aaPredicted RBP12.66□□□□□ -0.38
VPS11-205ENST00000534551 PEX5LQ8IYB4 626 aa12.66□□□□□ -0.38
VPS11-205ENST00000534551 CLIP4Q8N3C7 705 aa12.66□□□□□ -0.38
VPS11-205ENST00000534551 OR5W2Q8NH69 310 aa12.66□□□□□ -0.38
VPS11-205ENST00000534551 RP9Q8TA86 221 aaKnown RBP12.66□□□□□ -0.38
VPS11-205ENST00000534551 BBS10Q8TAM1 723 aa12.66□□□□□ -0.38
VPS11-205ENST00000534551 GPR119Q8TDV5 335 aa12.66□□□□□ -0.38
VPS11-205ENST00000534551 TUBA1CQ9BQE3 449 aa12.66□□□□□ -0.38
VPS11-205ENST00000534551 LAT2Q9GZY6 243 aa12.66□□□□□ -0.38
VPS11-205ENST00000534551 TMEM38AQ9H6F2 299 aa12.66□□□□□ -0.38
VPS11-205ENST00000534551 KAT8Q9H7Z6 458 aaKnown RBP12.66□□□□□ -0.38
VPS11-205ENST00000534551 NANOGQ9H9S0 305 aa12.66□□□□□ -0.38
VPS11-205ENST00000534551 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.66□□□□□ -0.38
VPS11-205ENST00000534551 MRGBPQ9NV56 204 aa12.66□□□□□ -0.38
VPS11-205ENST00000534551 SUCOQ9UBS9 1254 aaKnown RBP12.66□□□□□ -0.38
VPS11-205ENST00000534551 CORO2BQ9UQ03 480 aa12.66□□□□□ -0.38
VPS11-205ENST00000534551 SLC35A3Q9Y2D2 325 aa12.66□□□□□ -0.38
VPS11-205ENST00000534551 PTPN13Q12923 2485 aa12.66□□□□□ -0.38
VPS11-205ENST00000534551 SPTAN1Q13813 2472 aaKnown RBP12.66□□□□□ -0.38
VPS11-205ENST00000534551 DOPEY1Q5JWR5 2465 aa12.66□□□□□ -0.38
VPS11-205ENST00000534551 FAM47E-STBD1D6RA91 191 aa12.65□□□□□ -0.38
VPS11-205ENST00000534551 E9PLN8 166 aa12.65□□□□□ -0.38
VPS11-205ENST00000534551 EPPINO95925 133 aa12.65□□□□□ -0.38
VPS11-205ENST00000534551 FAM107AO95990 144 aa12.65□□□□□ -0.38
VPS11-205ENST00000534551 DBIP07108 87 aaKnown RBP12.65□□□□□ -0.38
VPS11-205ENST00000534551 GLI4P10075 376 aa12.65□□□□□ -0.38
VPS11-205ENST00000534551 ESRRAP11474 423 aaPredicted RBP12.65□□□□□ -0.38
VPS11-205ENST00000534551 PRG2P13727 222 aa12.65□□□□□ -0.38
VPS11-205ENST00000534551 IL7RP16871 459 aa12.65□□□□□ -0.38
VPS11-205ENST00000534551 ZNF708P17019 499 aa12.65□□□□□ -0.38
VPS11-205ENST00000534551 ZNF17P17021 662 aa12.65□□□□□ -0.38
VPS11-205ENST00000534551 SLC6A2P23975 617 aa12.65□□□□□ -0.38
VPS11-205ENST00000534551 CHMP24386 653 aa12.65□□□□□ -0.38
VPS11-205ENST00000534551 MSX1P28360 303 aa12.65□□□□□ -0.38
VPS11-205ENST00000534551 ADH7P40394 386 aa12.65□□□□□ -0.38
VPS11-205ENST00000534551 CBFBQ13951 182 aa12.65□□□□□ -0.38
VPS11-205ENST00000534551 LIN52Q52LA3 116 aa12.65□□□□□ -0.38
VPS11-205ENST00000534551 AAGABQ6PD74 315 aa12.65□□□□□ -0.38
VPS11-205ENST00000534551 POMZP3Q6PJE2 187 aa12.65□□□□□ -0.38
VPS11-205ENST00000534551 GGNQ86UU5 652 aa12.65□□□□□ -0.38
VPS11-205ENST00000534551 GTPBP8Q8N3Z3 284 aaPredicted RBP12.65□□□□□ -0.38
VPS11-205ENST00000534551 FBXO27Q8NI29 283 aa12.65□□□□□ -0.38
VPS11-205ENST00000534551 ITLN2Q8WWU7 325 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms