RNA–Protein interactions for RNA: ENST00000534393.5

RPUSD4-209, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 4

Gene RPUSD4, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-209ENST00000534393 SS18L1O75177 396 aaPredicted RBP7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 PEX11AO75192 247 aa7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 SEC22BO75396 215 aa7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 UBOX5O94941 541 aa7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 SOX30O94993 753 aa7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 NKX2-2O95096 273 aa7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 PAX1P15863 534 aa7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 LBPP18428 481 aa7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 PRPH2P23942 346 aa7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 CCKARP32238 428 aa7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 EIF1P41567 113 aaKnown RBP7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 EIF1AXP47813 144 aaKnown RBP7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 RFX3P48380 749 aa7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 ZNF41P51814 821 aaPredicted RBP7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 TPD52P55327 224 aaPredicted RBP7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 RAC1P63000 192 aa7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 PPP2R2BQ00005 443 aa7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 ZCCHC12Q6PEW1 402 aa7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 ESPNLQ6ZVH7 1005 aa7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 GGNQ86UU5 652 aa7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 GTPBP8Q8N3Z3 284 aaPredicted RBP7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 OR5M1Q8NGP8 315 aa7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 TMEM171Q8WVE6 324 aa7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 STON2Q8WXE9 905 aa7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 HOXB13Q92826 284 aaPredicted RBP7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 ZBED6CLQ96FA7 236 aaPredicted RBP7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 PERPQ96FX8 193 aa7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 ZC3HAV1LQ96H79 300 aaKnown RBP7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 NSL1Q96IY1 281 aa7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 MAELQ96JY0 434 aaKnown RBP7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 MARK4Q96L34 752 aa7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 USB1Q9BQ65 265 aaKnown RBP7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 HDHD5Q9BXW7 423 aa7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 RTN4RQ9BZR6 473 aa7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 NMUR2Q9GZQ4 415 aa7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 CXorf56Q9H5V9 222 aa7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 NGBQ9NPG2 151 aa7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 TIGARQ9NQ88 270 aa7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 UBQLN4Q9NRR5 601 aa7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 NTMQ9P121 344 aa7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 ARMCX1Q9P291 453 aa7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 GIMAP2Q9UG22 337 aa7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 VDAC3Q9Y277 283 aa7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 GPR52Q9Y2T5 361 aa7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 POLR3HQ9Y535 204 aaPredicted RBP7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 SNX8Q9Y5X2 465 aa7.53□□□□□ -1.2
RPUSD4-209ENST00000534393 SONP18583 2426 aaKnown RBP7.52□□□□□ -1.2
RPUSD4-209ENST00000534393 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 C17orf51A8MQB3 221 aa7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 SCDO00767 359 aa7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 PDPK1O15530 556 aa7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 TBX19O60806 448 aa7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 AQP8O94778 261 aa7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 PSMB1P20618 241 aaKnown RBP7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 MAP3K8P41279 467 aa7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 ASMTP46597 345 aa7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 PTH2RP49190 550 aa7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 PRIM2P49643 509 aa7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 MANFP55145 182 aaKnown RBP7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 HSPB3Q12988 150 aa7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 KRT72Q14CN4 511 aa7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 KIAA0040Q15053 153 aa7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 EXOC3L2Q2M3D2 409 aa7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 GRAMD1BQ3KR37 738 aa7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 GALNTL6Q49A17 601 aa7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 ATP6AP1LQ52LC2 224 aa7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 CPTPQ5TA50 214 aa7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 ANKRD34AQ69YU3 496 aa7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 PPP4R4Q6NUP7 873 aa7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 STAC2Q6ZMT1 411 aa7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 ZNF704Q6ZNC4 412 aaPredicted RBP7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 RNF165Q6ZSG1 346 aa7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 Q6ZSR9 355 aa7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 ZNF551Q7Z340 670 aaPredicted RBP7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 ZNF550Q7Z398 422 aa7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 R3HCC1LQ7Z5L2 792 aaKnown RBP7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 SPATA19Q7Z5L4 167 aa7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 ZNF611Q8N823 705 aa7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 NUP43Q8NFH3 380 aa7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 STEAP2Q8NFT2 490 aa7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 OR2T11Q8NH01 316 aa7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 OR10D3Q8NH80 312 aa7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 SLC9A6Q92581 669 aa7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 PPCDCQ96CD2 204 aa7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 MTERF3Q96E29 417 aa7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 REXO5Q96IC2 774 aaKnown RBP7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 MS4A4EQ96PG1 132 aa7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 HS3ST6Q96QI5 342 aa7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 CCDC106Q9BWC9 280 aa7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 REEP4Q9H6H4 257 aa7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 GP6Q9HCN6 339 aa7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 EQTNQ9NQ60 294 aa7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 ACSS1Q9NUB1 689 aaPredicted RBP7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 ZNF701Q9NV72 531 aaPredicted RBP7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 C1orf109Q9NX04 203 aa7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 FLRT3Q9NZU0 649 aa7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 TMED5Q9Y3A6 229 aa7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 COL6A5A8TX70 2615 aa7.52□□□□□ -1.21
RPUSD4-209ENST00000534393 PLCE1Q9P212 2302 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms