RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 SMG1Q96Q15 3661 aaKnown RBP11.59□□□□□ -0.55
RPUSD4-208ENST00000533628 CFAP46Q8IYW2 2715 aa11.59□□□□□ -0.55
RPUSD4-208ENST00000533628 SERINC4A6NH21 518 aa11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 NME4O00746 187 aa11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 SCDO00767 359 aa11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 ELAVL4P26378 380 aaKnown RBP11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 CPOXP36551 454 aa11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 CLK3P49761 638 aaKnown RBP11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 RNF144AP50876 292 aaPredicted RBP11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 PSME3P61289 254 aa11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 ALDH6A1Q02252 535 aaKnown RBP11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 C17orf67Q0P5P2 114 aa11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 FGFBP1Q14512 234 aa11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 ZNF630Q2M218 657 aaPredicted RBP11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 OR5M10Q6IEU7 315 aa11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 HMGN2P46Q86SG4 172 aa11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 MARVELD2Q8N4S9 558 aa11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 GATSQ8NAP1 163 aa11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 OR2M3Q8NG83 312 aa11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 OR1J4Q8NGS1 313 aa11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 CPT1CQ8TCG5 803 aa11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 COX4I2Q96KJ9 171 aa11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 JSRP1Q96MG2 331 aaPredicted RBP11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 KLHDC3Q9BQ90 382 aa11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 SPATA9Q9BWV2 254 aa11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 SDHAF3Q9NRP4 125 aa11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 FBXL2Q9UKC9 423 aa11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 SPTA1P02549 2419 aa11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 SHANK1Q9Y566 2161 aa11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 FAM166BA8MTA8 275 aa11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 BCAS1O75363 584 aaPredicted RBP11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 CELA3AP09093 270 aa11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 MAGEA5P43359 124 aa11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 MASP1P48740 699 aa11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 SLC7A2P52569 658 aa11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 PCBP3P57721 371 aaKnown RBP11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 PLGLB1Q02325 96 aa11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 SCARB2Q14108 478 aa11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 GNA13Q14344 377 aa11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 SMUG1Q53HV7 270 aa11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 REEP3Q6NUK4 255 aa11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 SLC22A16Q86VW1 577 aa11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 ERI1Q8IV48 349 aaKnown RBP11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 FAM109AQ8N4B1 249 aa11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 ZNF527Q8NB42 609 aa11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 FAM71CQ8NEG0 241 aa11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 BBS10Q8TAM1 723 aa11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 KLHL4Q9C0H6 718 aa11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 PLSCR2Q9NRY7 297 aa11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 QPCTLQ9NXS2 382 aa11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 PPP4R1LQ9P1A2 415 aa11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 TMEM181Q9P2C4 612 aa11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 CHST2Q9Y4C5 530 aa11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 GPC6Q9Y625 555 aaPredicted RBP11.58□□□□□ -0.56
RPUSD4-208ENST00000533628 PCNX3Q9H6A9 2034 aa11.57□□□□□ -0.56
RPUSD4-208ENST00000533628 CCDC160A6NGH7 325 aa11.57□□□□□ -0.56
RPUSD4-208ENST00000533628 CLDN24A6NM45 220 aa11.57□□□□□ -0.56
RPUSD4-208ENST00000533628 CBR3O75828 277 aa11.57□□□□□ -0.56
RPUSD4-208ENST00000533628 HPNP05981 417 aa11.57□□□□□ -0.56
RPUSD4-208ENST00000533628 ESRRAP11474 423 aaPredicted RBP11.57□□□□□ -0.56
RPUSD4-208ENST00000533628 PCGF2P35227 344 aa11.57□□□□□ -0.56
RPUSD4-208ENST00000533628 SLC25A3Q00325 362 aa11.57□□□□□ -0.56
RPUSD4-208ENST00000533628 CYP51A1Q16850 503 aa11.57□□□□□ -0.56
RPUSD4-208ENST00000533628 VMACQ2NL98 169 aa11.57□□□□□ -0.56
RPUSD4-208ENST00000533628 BNC2Q6ZN30 1099 aaPredicted RBP11.57□□□□□ -0.56
RPUSD4-208ENST00000533628 MISPQ8IVT2 679 aa11.57□□□□□ -0.56
RPUSD4-208ENST00000533628 CHERPQ8IWX8 916 aaKnown RBP11.57□□□□□ -0.56
RPUSD4-208ENST00000533628 C11orf65Q8NCR3 313 aa11.57□□□□□ -0.56
RPUSD4-208ENST00000533628 HIPK4Q8NE63 616 aa11.57□□□□□ -0.56
RPUSD4-208ENST00000533628 MIB2Q96AX9 1013 aa11.57□□□□□ -0.56
RPUSD4-208ENST00000533628 REXO5Q96IC2 774 aaKnown RBP11.57□□□□□ -0.56
RPUSD4-208ENST00000533628 TPK1Q9H3S4 243 aa11.57□□□□□ -0.56
RPUSD4-208ENST00000533628 DSN1Q9H410 356 aa11.57□□□□□ -0.56
RPUSD4-208ENST00000533628 PIF1Q9H611 641 aa11.57□□□□□ -0.56
RPUSD4-208ENST00000533628 OLAHQ9NV23 265 aa11.57□□□□□ -0.56
RPUSD4-208ENST00000533628 MED11Q9P086 117 aa11.57□□□□□ -0.56
RPUSD4-208ENST00000533628 AP3M1Q9Y2T2 418 aa11.57□□□□□ -0.56
RPUSD4-208ENST00000533628 FUOMA2VDF0 154 aa11.56□□□□□ -0.56
RPUSD4-208ENST00000533628 FAM220BPB1ANY3 271 aa11.56□□□□□ -0.56
RPUSD4-208ENST00000533628 NPIPA5E9PKD4 350 aa11.56□□□□□ -0.56
RPUSD4-208ENST00000533628 DNAJA2O60884 412 aa11.56□□□□□ -0.56
RPUSD4-208ENST00000533628 IGHG3P01860 377 aa11.56□□□□□ -0.56
RPUSD4-208ENST00000533628 HPGDP15428 266 aa11.56□□□□□ -0.56
RPUSD4-208ENST00000533628 AQP4P55087 323 aa11.56□□□□□ -0.56
RPUSD4-208ENST00000533628 ZNF117Q03924 483 aa11.56□□□□□ -0.56
RPUSD4-208ENST00000533628 APOFQ13790 326 aa11.56□□□□□ -0.56
RPUSD4-208ENST00000533628 NDUFAF6Q330K2 333 aa11.56□□□□□ -0.56
RPUSD4-208ENST00000533628 C16orf87Q6PH81 154 aa11.56□□□□□ -0.56
RPUSD4-208ENST00000533628 CBLN3Q6UW01 205 aa11.56□□□□□ -0.56
RPUSD4-208ENST00000533628 VRK2Q86Y07 508 aa11.56□□□□□ -0.56
RPUSD4-208ENST00000533628 PGAM4Q8N0Y7 254 aa11.56□□□□□ -0.56
RPUSD4-208ENST00000533628 OR52P1PQ8NH57 321 aa11.56□□□□□ -0.56
RPUSD4-208ENST00000533628 PHOSPHO1Q8TCT1 267 aa11.56□□□□□ -0.56
RPUSD4-208ENST00000533628 GIPC3Q8TF64 312 aa11.56□□□□□ -0.56
RPUSD4-208ENST00000533628 ZNF524Q96C55 264 aa11.56□□□□□ -0.56
RPUSD4-208ENST00000533628 GPR137Q96N19 417 aa11.56□□□□□ -0.56
RPUSD4-208ENST00000533628 DEFB127Q9H1M4 99 aa11.56□□□□□ -0.56
RPUSD4-208ENST00000533628 TSPAN10Q9H1Z9 355 aaPredicted RBP11.56□□□□□ -0.56
RPUSD4-208ENST00000533628 ZNF696Q9H7X3 374 aa11.56□□□□□ -0.56
RPUSD4-208ENST00000533628 ACKR4Q9NPB9 350 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms