RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 E9PLN8 166 aa10.84□□□□□ -0.67
SSBP3-214ENST00000533209 ADAM11O75078 769 aa10.84□□□□□ -0.67
SSBP3-214ENST00000533209 PGM3O95394 542 aa10.84□□□□□ -0.67
SSBP3-214ENST00000533209 LDLRP01130 860 aa10.84□□□□□ -0.67
SSBP3-214ENST00000533209 LINGO3P0C6S8 592 aa10.84□□□□□ -0.67
SSBP3-214ENST00000533209 UBTFL6P0CB48 400 aaPredicted RBP10.84□□□□□ -0.67
SSBP3-214ENST00000533209 RNF224P0DH78 156 aa10.84□□□□□ -0.67
SSBP3-214ENST00000533209 CPN1P15169 458 aa10.84□□□□□ -0.67
SSBP3-214ENST00000533209 IL7RP16871 459 aa10.84□□□□□ -0.67
SSBP3-214ENST00000533209 PSMA4P25789 261 aaKnown RBP10.84□□□□□ -0.67
SSBP3-214ENST00000533209 PRDX6P30041 224 aa10.84□□□□□ -0.67
SSBP3-214ENST00000533209 LHX2P50458 406 aa10.84□□□□□ -0.67
SSBP3-214ENST00000533209 ZNF41P51814 821 aaPredicted RBP10.84□□□□□ -0.67
SSBP3-214ENST00000533209 RBBP4Q09028 425 aa10.84□□□□□ -0.67
SSBP3-214ENST00000533209 SCARB2Q14108 478 aa10.84□□□□□ -0.67
SSBP3-214ENST00000533209 RTL6Q6ICC9 239 aa10.84□□□□□ -0.67
SSBP3-214ENST00000533209 REEP3Q6NUK4 255 aa10.84□□□□□ -0.67
SSBP3-214ENST00000533209 ZNF585AQ6P3V2 769 aa10.84□□□□□ -0.67
SSBP3-214ENST00000533209 AAGABQ6PD74 315 aa10.84□□□□□ -0.67
SSBP3-214ENST00000533209 ENPP6Q6UWR7 440 aa10.84□□□□□ -0.67
SSBP3-214ENST00000533209 ZNF836Q6ZNA1 936 aa10.84□□□□□ -0.67
SSBP3-214ENST00000533209 NCCRP1Q6ZVX7 275 aaPredicted RBP10.84□□□□□ -0.67
SSBP3-214ENST00000533209 VRK2Q86Y07 508 aa10.84□□□□□ -0.67
SSBP3-214ENST00000533209 ZZZ3Q8IYH5 903 aa10.84□□□□□ -0.67
SSBP3-214ENST00000533209 GTPBP8Q8N3Z3 284 aaPredicted RBP10.84□□□□□ -0.67
SSBP3-214ENST00000533209 RPRMLQ8N4K4 120 aa10.84□□□□□ -0.67
SSBP3-214ENST00000533209 MARVELD2Q8N4S9 558 aa10.84□□□□□ -0.67
SSBP3-214ENST00000533209 TMCO5AQ8N6Q1 288 aa10.84□□□□□ -0.67
SSBP3-214ENST00000533209 OR5W2Q8NH69 310 aa10.84□□□□□ -0.67
SSBP3-214ENST00000533209 OR10A6Q8NH74 314 aa10.84□□□□□ -0.67
SSBP3-214ENST00000533209 POC1BQ8TC44 478 aa10.84□□□□□ -0.67
SSBP3-214ENST00000533209 ZBTB8AQ96BR9 441 aa10.84□□□□□ -0.67
SSBP3-214ENST00000533209 VKORC1Q9BQB6 163 aa10.84□□□□□ -0.67
SSBP3-214ENST00000533209 PIGQQ9BRB3 760 aa10.84□□□□□ -0.67
SSBP3-214ENST00000533209 RSPO3Q9BXY4 272 aaPredicted RBP10.84□□□□□ -0.67
SSBP3-214ENST00000533209 EXOSC3Q9NQT5 275 aaKnown RBP10.84□□□□□ -0.67
SSBP3-214ENST00000533209 DNAJB12Q9NXW2 375 aaKnown RBP10.84□□□□□ -0.67
SSBP3-214ENST00000533209 CAMK2AQ9UQM7 478 aa10.84□□□□□ -0.67
SSBP3-214ENST00000533209 ZNF337Q9Y3M9 751 aa10.84□□□□□ -0.67
SSBP3-214ENST00000533209 CHST2Q9Y4C5 530 aa10.84□□□□□ -0.67
SSBP3-214ENST00000533209 FAM215AQ9Y5M1 114 aa10.84□□□□□ -0.67
SSBP3-214ENST00000533209 FREM3P0C091 2139 aa10.84□□□□□ -0.67
SSBP3-214ENST00000533209 DOPEY1Q5JWR5 2465 aa10.83□□□□□ -0.68
SSBP3-214ENST00000533209 BAHCC1Q9P281 2608 aa10.83□□□□□ -0.68
SSBP3-214ENST00000533209 COL12A1Q99715 3063 aa10.83□□□□□ -0.68
SSBP3-214ENST00000533209 FIGNL2A6NMB9 653 aa10.83□□□□□ -0.68
SSBP3-214ENST00000533209 AHRRA9YTQ3 701 aa10.83□□□□□ -0.68
SSBP3-214ENST00000533209 LINC01387J3KSC0 135 aa10.83□□□□□ -0.68
SSBP3-214ENST00000533209 ETV2O00321 342 aaPredicted RBP10.83□□□□□ -0.68
SSBP3-214ENST00000533209 AIM2O14862 343 aa10.83□□□□□ -0.68
SSBP3-214ENST00000533209 WDR1O75083 606 aa10.83□□□□□ -0.68
SSBP3-214ENST00000533209 CYP7B1O75881 506 aa10.83□□□□□ -0.68
SSBP3-214ENST00000533209 DCTN3O75935 186 aa10.83□□□□□ -0.68
SSBP3-214ENST00000533209 NTN1O95631 604 aa10.83□□□□□ -0.68
SSBP3-214ENST00000533209 NUDT14O95848 222 aa10.83□□□□□ -0.68
SSBP3-214ENST00000533209 THBS1P07996 1170 aa10.83□□□□□ -0.68
SSBP3-214ENST00000533209 GABRA1P14867 456 aa10.83□□□□□ -0.68
SSBP3-214ENST00000533209 ETS2P15036 469 aa10.83□□□□□ -0.68
SSBP3-214ENST00000533209 ZNF708P17019 499 aa10.83□□□□□ -0.68
SSBP3-214ENST00000533209 ZNF17P17021 662 aa10.83□□□□□ -0.68
SSBP3-214ENST00000533209 SLC6A2P23975 617 aa10.83□□□□□ -0.68
SSBP3-214ENST00000533209 ACVR2AP27037 513 aa10.83□□□□□ -0.68
SSBP3-214ENST00000533209 CCR4P51679 360 aa10.83□□□□□ -0.68
SSBP3-214ENST00000533209 CLDN18P56856 261 aa10.83□□□□□ -0.68
SSBP3-214ENST00000533209 EEF1A1P68104 462 aaKnown RBP10.83□□□□□ -0.68
SSBP3-214ENST00000533209 FOXF1Q12946 379 aa10.83□□□□□ -0.68
SSBP3-214ENST00000533209 BCL2A1Q16548 175 aa10.83□□□□□ -0.68
SSBP3-214ENST00000533209 CYP51A1Q16850 503 aa10.83□□□□□ -0.68
SSBP3-214ENST00000533209 LIN52Q52LA3 116 aa10.83□□□□□ -0.68
SSBP3-214ENST00000533209 SLC25A53Q5H9E4 307 aa10.83□□□□□ -0.68
SSBP3-214ENST00000533209 MRPL2Q5T653 305 aaKnown RBP10.83□□□□□ -0.68
SSBP3-214ENST00000533209 GKAP1Q5VSY0 366 aaPredicted RBP10.83□□□□□ -0.68
SSBP3-214ENST00000533209 FAM91A1Q658Y4 838 aa10.83□□□□□ -0.68
SSBP3-214ENST00000533209 SERPINA11Q86U17 422 aa10.83□□□□□ -0.68
SSBP3-214ENST00000533209 CALHM3Q86XJ0 350 aa10.83□□□□□ -0.68
SSBP3-214ENST00000533209 PM20D2Q8IYS1 436 aa10.83□□□□□ -0.68
SSBP3-214ENST00000533209 C11orf65Q8NCR3 313 aa10.83□□□□□ -0.68
SSBP3-214ENST00000533209 HIPK4Q8NE63 616 aa10.83□□□□□ -0.68
SSBP3-214ENST00000533209 SSC4DQ8WTU2 575 aa10.83□□□□□ -0.68
SSBP3-214ENST00000533209 CMTM5Q96DZ9 223 aa10.83□□□□□ -0.68
SSBP3-214ENST00000533209 CCDC120Q96HB5 630 aa10.83□□□□□ -0.68
SSBP3-214ENST00000533209 RNF145Q96MT1 663 aa10.83□□□□□ -0.68
SSBP3-214ENST00000533209 LRRC37BQ96QE4 947 aa10.83□□□□□ -0.68
SSBP3-214ENST00000533209 SH3GL1Q99961 368 aa10.83□□□□□ -0.68
SSBP3-214ENST00000533209 GPATCH1Q9BRR8 931 aaKnown RBP10.83□□□□□ -0.68
SSBP3-214ENST00000533209 RLIMQ9NVW2 624 aa10.83□□□□□ -0.68
SSBP3-214ENST00000533209 ALKBH4Q9NXW9 302 aa10.83□□□□□ -0.68
SSBP3-214ENST00000533209 ZNF443Q9Y2A4 671 aaPredicted RBP10.83□□□□□ -0.68
SSBP3-214ENST00000533209 IFT52Q9Y366 437 aa10.83□□□□□ -0.68
SSBP3-214ENST00000533209 GPC6Q9Y625 555 aaPredicted RBP10.83□□□□□ -0.68
SSBP3-214ENST00000533209 PCNX3Q9H6A9 2034 aa10.83□□□□□ -0.68
SSBP3-214ENST00000533209 CDHR4A6H8M9 788 aa10.82□□□□□ -0.68
SSBP3-214ENST00000533209 KDM4EB2RXH2 506 aaPredicted RBP10.82□□□□□ -0.68
SSBP3-214ENST00000533209 FAM47E-STBD1D6RA91 191 aa10.82□□□□□ -0.68
SSBP3-214ENST00000533209 EFNA2O43921 213 aa10.82□□□□□ -0.68
SSBP3-214ENST00000533209 ZG16O60844 167 aa10.82□□□□□ -0.68
SSBP3-214ENST00000533209 GCM2O75603 506 aaPredicted RBP10.82□□□□□ -0.68
SSBP3-214ENST00000533209 HOXD4P09016 255 aaPredicted RBP10.82□□□□□ -0.68
SSBP3-214ENST00000533209 PABPC4LP0CB38 370 aaKnown RBP10.82□□□□□ -0.68
SSBP3-214ENST00000533209 ESRRAP11474 423 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms