RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 CCDC154A6NI56 674 aa27.2■■□□□ 1.94
SSSCA1-207ENST00000533115 MSTNO14793 375 aa27.2■■□□□ 1.94
SSSCA1-207ENST00000533115 ADAMDEC1O15204 470 aa27.2■■□□□ 1.94
SSSCA1-207ENST00000533115 ZNF264O43296 627 aa27.2■■□□□ 1.94
SSSCA1-207ENST00000533115 CTAG2O75638 210 aa27.2■■□□□ 1.94
SSSCA1-207ENST00000533115 GUSBP08236 651 aa27.2■■□□□ 1.94
SSSCA1-207ENST00000533115 UBL4AP11441 157 aa27.2■■□□□ 1.94
SSSCA1-207ENST00000533115 KIR2DL2P43627 348 aaPredicted RBP27.2■■□□□ 1.94
SSSCA1-207ENST00000533115 GSTA3Q16772 222 aa27.2■■□□□ 1.94
SSSCA1-207ENST00000533115 TTMPQ5BVD1 217 aa27.2■■□□□ 1.94
SSSCA1-207ENST00000533115 ESPNLQ6ZVH7 1005 aa27.2■■□□□ 1.94
SSSCA1-207ENST00000533115 MARK4Q96L34 752 aa27.2■■□□□ 1.94
SSSCA1-207ENST00000533115 OR52B2Q96RD2 323 aa27.2■■□□□ 1.94
SSSCA1-207ENST00000533115 INPP5KQ9BT40 448 aa27.2■■□□□ 1.94
SSSCA1-207ENST00000533115 TMEM185BQ9H7F4 350 aa27.2■■□□□ 1.94
SSSCA1-207ENST00000533115 CCDC168Q8NDH2 2452 aa27.19■■□□□ 1.94
SSSCA1-207ENST00000533115 SLC22A3O75751 556 aa27.19■■□□□ 1.94
SSSCA1-207ENST00000533115 UGT2B17O75795 530 aa27.19■■□□□ 1.94
SSSCA1-207ENST00000533115 SMNDC1O75940 238 aaKnown RBP eCLIP27.19■■□□□ 1.94
SSSCA1-207ENST00000533115 IL11P20809 199 aa27.19■■□□□ 1.94
SSSCA1-207ENST00000533115 ELK4P28324 431 aa27.19■■□□□ 1.94
SSSCA1-207ENST00000533115 ADH6P28332 368 aa27.19■■□□□ 1.94
SSSCA1-207ENST00000533115 SIRPAP78324 504 aa27.19■■□□□ 1.94
SSSCA1-207ENST00000533115 TOMM34Q15785 309 aaPredicted RBP27.19■■□□□ 1.94
SSSCA1-207ENST00000533115 BTLAQ7Z6A9 289 aa27.19■■□□□ 1.94
SSSCA1-207ENST00000533115 LILRA2Q8N149 483 aa27.19■■□□□ 1.94
SSSCA1-207ENST00000533115 TMCO5AQ8N6Q1 288 aa27.19■■□□□ 1.94
SSSCA1-207ENST00000533115 TOR1AIP2Q8NFQ8 470 aa27.19■■□□□ 1.94
SSSCA1-207ENST00000533115 OR2V1Q8NHB1 315 aa27.19■■□□□ 1.94
SSSCA1-207ENST00000533115 RFWD2Q8NHY2 731 aa27.19■■□□□ 1.94
SSSCA1-207ENST00000533115 FBXO27Q8NI29 283 aa27.19■■□□□ 1.94
SSSCA1-207ENST00000533115 LINC01560Q8TB33 94 aa27.19■■□□□ 1.94
SSSCA1-207ENST00000533115 C7orf26Q96N11 449 aa27.19■■□□□ 1.94
SSSCA1-207ENST00000533115 PRRG4Q9BZD6 226 aa27.19■■□□□ 1.94
SSSCA1-207ENST00000533115 POLE3Q9NRF9 147 aa27.19■■□□□ 1.94
SSSCA1-207ENST00000533115 DNAJB12Q9NXW2 375 aaKnown RBP27.19■■□□□ 1.94
SSSCA1-207ENST00000533115 GPC6Q9Y625 555 aaPredicted RBP27.19■■□□□ 1.94
SSSCA1-207ENST00000533115 USH1CQ9Y6N9 552 aa27.19■■□□□ 1.94
SSSCA1-207ENST00000533115 A0A0J9YW62 118 aa27.18■■□□□ 1.94
SSSCA1-207ENST00000533115 CENPVL1A0A0U1RR11 272 aa27.18■■□□□ 1.94
SSSCA1-207ENST00000533115 FAM221AA4D161 298 aa27.18■■□□□ 1.94
SSSCA1-207ENST00000533115 A6NNC1 897 aa27.18■■□□□ 1.94
SSSCA1-207ENST00000533115 UBDO15205 165 aa27.18■■□□□ 1.94
SSSCA1-207ENST00000533115 AQP8O94778 261 aa27.18■■□□□ 1.94
SSSCA1-207ENST00000533115 C1QCP02747 245 aa27.18■■□□□ 1.94
SSSCA1-207ENST00000533115 IL6P05231 212 aa27.18■■□□□ 1.94
SSSCA1-207ENST00000533115 EPXP11678 715 aa27.18■■□□□ 1.94
SSSCA1-207ENST00000533115 CDKN2CP42773 168 aa27.18■■□□□ 1.94
SSSCA1-207ENST00000533115 FUT5Q11128 374 aa27.18■■□□□ 1.94
SSSCA1-207ENST00000533115 FGFBP1Q14512 234 aa27.18■■□□□ 1.94
SSSCA1-207ENST00000533115 PDSS1Q5T2R2 415 aa27.18■■□□□ 1.94
SSSCA1-207ENST00000533115 AP1ARQ63HQ0 302 aa27.18■■□□□ 1.94
SSSCA1-207ENST00000533115 TYW3Q6IPR3 259 aaKnown RBP27.18■■□□□ 1.94
SSSCA1-207ENST00000533115 PPP4R4Q6NUP7 873 aa27.18■■□□□ 1.94
SSSCA1-207ENST00000533115 ZNF621Q6ZSS3 439 aa27.18■■□□□ 1.94
SSSCA1-207ENST00000533115 OR5W2Q8NH69 310 aa27.18■■□□□ 1.94
SSSCA1-207ENST00000533115 ROPN1LQ96C74 230 aa27.18■■□□□ 1.94
SSSCA1-207ENST00000533115 ARSGQ96EG1 525 aa27.18■■□□□ 1.94
SSSCA1-207ENST00000533115 GPATCH1Q9BRR8 931 aaKnown RBP27.18■■□□□ 1.94
SSSCA1-207ENST00000533115 ZIM2Q9NZV7 527 aa27.18■■□□□ 1.94
SSSCA1-207ENST00000533115 MCTS1Q9ULC4 181 aaKnown RBP27.18■■□□□ 1.94
SSSCA1-207ENST00000533115 WDR45Q9Y484 360 aa27.18■■□□□ 1.94
SSSCA1-207ENST00000533115 SPG11Q96JI7 2443 aa27.18■■□□□ 1.94
SSSCA1-207ENST00000533115 TNFSF11O14788 317 aa27.17■■□□□ 1.94
SSSCA1-207ENST00000533115 CXCL13O43927 109 aa27.17■■□□□ 1.94
SSSCA1-207ENST00000533115 KIAA0513O60268 411 aa27.17■■□□□ 1.94
SSSCA1-207ENST00000533115 DIAPH2O60879 1101 aa27.17■■□□□ 1.94
SSSCA1-207ENST00000533115 PRKCAP17252 672 aa27.17■■□□□ 1.94
SSSCA1-207ENST00000533115 SLC6A8P48029 635 aa27.17■■□□□ 1.94
SSSCA1-207ENST00000533115 CBFBQ13951 182 aa27.17■■□□□ 1.94
SSSCA1-207ENST00000533115 DAZAP2Q15038 168 aaPredicted RBP27.17■■□□□ 1.94
SSSCA1-207ENST00000533115 GUSBP1Q15486 140 aa27.17■■□□□ 1.94
SSSCA1-207ENST00000533115 HBMQ6B0K9 141 aa27.17■■□□□ 1.94
SSSCA1-207ENST00000533115 EPGNQ6UW88 154 aa27.17■■□□□ 1.94
SSSCA1-207ENST00000533115 HDXQ7Z353 690 aa27.17■■□□□ 1.94
SSSCA1-207ENST00000533115 RNF130Q86XS8 419 aa27.17■■□□□ 1.94
SSSCA1-207ENST00000533115 LRRC8CQ8TDW0 803 aa27.17■■□□□ 1.94
SSSCA1-207ENST00000533115 OIT3Q8WWZ8 545 aa27.17■■□□□ 1.94
SSSCA1-207ENST00000533115 KLHL15Q96M94 604 aa27.17■■□□□ 1.94
SSSCA1-207ENST00000533115 LAT2Q9GZY6 243 aa27.17■■□□□ 1.94
SSSCA1-207ENST00000533115 SAP130Q9H0E3 1048 aa27.17■■□□□ 1.94
SSSCA1-207ENST00000533115 SDR39U1Q9NRG7 319 aaPredicted RBP27.17■■□□□ 1.94
SSSCA1-207ENST00000533115 RASSF1Q9NS23 344 aa27.17■■□□□ 1.94
SSSCA1-207ENST00000533115 ITGB1BP2Q9UKP3 347 aa27.17■■□□□ 1.94
SSSCA1-207ENST00000533115 HMGN4O00479 90 aa27.16■■□□□ 1.94
SSSCA1-207ENST00000533115 EFNA2O43921 213 aa27.16■■□□□ 1.94
SSSCA1-207ENST00000533115 SYNGR4O95473 234 aa27.16■■□□□ 1.94
SSSCA1-207ENST00000533115 GSNP06396 782 aa27.16■■□□□ 1.94
SSSCA1-207ENST00000533115 CPOXP36551 454 aa27.16■■□□□ 1.94
SSSCA1-207ENST00000533115 CCR4P51679 360 aa27.16■■□□□ 1.94
SSSCA1-207ENST00000533115 SKP2Q13309 424 aa27.16■■□□□ 1.94
SSSCA1-207ENST00000533115 MAPK14Q16539 360 aa27.16■■□□□ 1.94
SSSCA1-207ENST00000533115 MRGPRX4Q96LA9 322 aa27.16■■□□□ 1.94
SSSCA1-207ENST00000533115 POLDIP3Q9BY77 421 aaKnown RBP27.16■■□□□ 1.94
SSSCA1-207ENST00000533115 ARGLU1Q9NWB6 273 aaPredicted RBP27.16■■□□□ 1.94
SSSCA1-207ENST00000533115 MPDZO75970 2070 aa27.16■■□□□ 1.94
SSSCA1-207ENST00000533115 PRAMEF27A3QJZ7 478 aa27.15■■□□□ 1.94
SSSCA1-207ENST00000533115 CSTAP01040 98 aa27.15■■□□□ 1.94
SSSCA1-207ENST00000533115 CGAP01215 116 aa27.15■■□□□ 1.94
SSSCA1-207ENST00000533115 SFTPDP35247 375 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms