RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 AGAP4Q96P64 663 aa10.57□□□□□ -0.72
PTPRK-221ENST00000532331 ZNF700Q9H0M5 742 aa10.57□□□□□ -0.72
PTPRK-221ENST00000532331 RIMS3Q9UJD0 308 aa10.57□□□□□ -0.72
PTPRK-221ENST00000532331 PRKYO43930 277 aa10.57□□□□□ -0.72
PTPRK-221ENST00000532331 DCTP40126 519 aa10.57□□□□□ -0.72
PTPRK-221ENST00000532331 MAGEA2P43356 314 aa10.57□□□□□ -0.72
PTPRK-221ENST00000532331 GRK1Q15835 563 aa10.57□□□□□ -0.72
PTPRK-221ENST00000532331 PLEKHN1Q494U1 663 aaPredicted RBP10.57□□□□□ -0.72
PTPRK-221ENST00000532331 BCL2L15Q5TBC7 163 aa10.57□□□□□ -0.72
PTPRK-221ENST00000532331 BEND4Q6ZU67 534 aa10.57□□□□□ -0.72
PTPRK-221ENST00000532331 LAS2Q8IYD9 372 aa10.57□□□□□ -0.72
PTPRK-221ENST00000532331 TAAR9Q96RI9 348 aa10.57□□□□□ -0.72
PTPRK-221ENST00000532331 LMF2Q9BU23 707 aaKnown RBP10.57□□□□□ -0.72
PTPRK-221ENST00000532331 PARPBPQ9NWS1 579 aa10.57□□□□□ -0.72
PTPRK-221ENST00000532331 FAM53CQ9NYF3 392 aa10.57□□□□□ -0.72
PTPRK-221ENST00000532331 SLC7A7Q9UM01 511 aa10.57□□□□□ -0.72
PTPRK-221ENST00000532331 RREB1Q92766 1687 aa10.57□□□□□ -0.72
PTPRK-221ENST00000532331 SLC1A7O00341 560 aa10.57□□□□□ -0.72
PTPRK-221ENST00000532331 CASC3O15234 703 aaKnown RBP10.57□□□□□ -0.72
PTPRK-221ENST00000532331 SLCO2B1O94956 709 aa10.57□□□□□ -0.72
PTPRK-221ENST00000532331 THBS2P35442 1172 aa10.57□□□□□ -0.72
PTPRK-221ENST00000532331 MISPQ8IVT2 679 aa10.57□□□□□ -0.72
PTPRK-221ENST00000532331 OR5D16Q8NGK9 328 aa10.57□□□□□ -0.72
PTPRK-221ENST00000532331 PATE1Q8WXA2 126 aa10.57□□□□□ -0.72
PTPRK-221ENST00000532331 SMOXQ9NWM0 555 aa10.57□□□□□ -0.72
PTPRK-221ENST00000532331 TARM1B6A8C7 271 aa10.57□□□□□ -0.72
PTPRK-221ENST00000532331 ZNF806P0C7X5 589 aa10.57□□□□□ -0.72
PTPRK-221ENST00000532331 BMP2P12643 396 aa10.57□□□□□ -0.72
PTPRK-221ENST00000532331 BMP1P13497 986 aa10.57□□□□□ -0.72
PTPRK-221ENST00000532331 PTGER1P34995 402 aa10.57□□□□□ -0.72
PTPRK-221ENST00000532331 MAN2A2P49641 1150 aa10.57□□□□□ -0.72
PTPRK-221ENST00000532331 TMEM71Q6P5X7 295 aa10.57□□□□□ -0.72
PTPRK-221ENST00000532331 DHRS13Q6UX07 377 aa10.57□□□□□ -0.72
PTPRK-221ENST00000532331 SHFQ7M4L6 423 aa10.57□□□□□ -0.72
PTPRK-221ENST00000532331 KHSRPQ92945 711 aaKnown RBP eCLIP10.57□□□□□ -0.722e-6■■□□□ 14.1
PTPRK-221ENST00000532331 OR10A5Q9H207 317 aa10.57□□□□□ -0.72
PTPRK-221ENST00000532331 NMNAT1Q9HAN9 279 aaPredicted RBP10.57□□□□□ -0.72
PTPRK-221ENST00000532331 ISPDA4D126 451 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 INMT-MINDY4F8WBC2 141 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 KIAA0513O60268 411 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 TNFRSF1BP20333 461 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 CD1CP29017 333 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 CRABP1P29762 137 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 GNRHRP30968 328 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 HSD17B7P56937 341 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 TRIP6Q15654 476 aaKnown RBP10.56□□□□□ -0.72
PTPRK-221ENST00000532331 ZNF585AQ6P3V2 769 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 MRPL21Q7Z2W9 205 aaKnown RBP10.56□□□□□ -0.72
PTPRK-221ENST00000532331 RPS19BP1Q86WX3 136 aaKnown RBP10.56□□□□□ -0.72
PTPRK-221ENST00000532331 METTL4Q8N3J2 472 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 LGALS12Q96DT0 336 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 DHRS4Q9BTZ2 278 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 MFRPQ9BY79 579 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 ANKRD10Q9NXR5 420 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 MYH7BA7E2Y1 1941 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 GON4LQ3T8J9 2241 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 PRRC2BQ5JSZ5 2229 aaKnown RBP10.56□□□□□ -0.72
PTPRK-221ENST00000532331 XIRP1Q702N8 1843 aaKnown RBP10.56□□□□□ -0.72
PTPRK-221ENST00000532331 TRAV6A0A075B6T7 132 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 LMO7DNF2Z398 122 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 M0R3H8 397 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 LRRTM2O43300 516 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 DENRO43583 198 aaKnown RBP10.56□□□□□ -0.72
PTPRK-221ENST00000532331 LCATP04180 440 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 UCHL1P09936 223 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 EIF3IQ13347 325 aaKnown RBP10.56□□□□□ -0.72
PTPRK-221ENST00000532331 XKRXQ6PP77 449 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 DCDC5Q6ZRR9 648 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 FRMD1Q8N878 549 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 SMRP1Q8NCR6 262 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 ZNF431Q8TF32 576 aaPredicted RBP10.56□□□□□ -0.72
PTPRK-221ENST00000532331 SAMD8Q96LT4 415 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 USB1Q9BQ65 265 aaKnown RBP10.56□□□□□ -0.72
PTPRK-221ENST00000532331 ZNF471Q9BX82 626 aaPredicted RBP10.56□□□□□ -0.72
PTPRK-221ENST00000532331 ADAM18Q9Y3Q7 739 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 TSPAN9O75954 239 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 PPP1R3DO95685 299 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 MT-CO3P00414 261 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 PTHP01270 115 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 HOXB9P17482 250 aaPredicted RBP10.56□□□□□ -0.72
PTPRK-221ENST00000532331 GPR3P46089 330 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 CCL7P80098 99 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 MZT1Q08AG7 82 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 KCTD11Q693B1 232 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 SERPINA11Q86U17 422 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 TRMT10AQ8TBZ6 339 aaKnown RBP10.56□□□□□ -0.72
PTPRK-221ENST00000532331 FAM46BQ96A09 425 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 SLC46A1Q96NT5 459 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 SORT1Q99523 831 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 EVA1AQ9H8M9 152 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 ARMC1Q9NVT9 282 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 KCNS2Q9ULS6 477 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 COL5A3P25940 1745 aaPredicted RBP10.56□□□□□ -0.72
PTPRK-221ENST00000532331 SPTY2D1-AS1A0A0U1RR47 76 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 GABRR3A8MPY1 467 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 CTNSO60931 367 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 PET100P0DJ07 73 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 GPX3P22352 226 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 MSX1P28360 303 aa10.56□□□□□ -0.72
PTPRK-221ENST00000532331 POU3F4P49335 361 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms