RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 DYRK2Q92630 601 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 TMEM74Q96NL1 305 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 SDCBP2Q9H190 292 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 PIGMQ9H3S5 423 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 CLCF1Q9UBD9 225 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 ADAM29Q9UKF5 820 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 PIAS3Q9Y6X2 628 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 U3KQ87 197 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 SLX4Q8IY92 1834 aa6.84□□□□□ -1.31
CTNND1-229ENST00000531014 BTBD17A6NE02 478 aa6.84□□□□□ -1.32
CTNND1-229ENST00000531014 TRIM77I1YAP6 450 aa6.84□□□□□ -1.32
CTNND1-229ENST00000531014 J3KR12 359 aa6.84□□□□□ -1.32
CTNND1-229ENST00000531014 ARHGAP33O14559 1287 aa6.84□□□□□ -1.32
CTNND1-229ENST00000531014 HOXB5P09067 269 aa6.84□□□□□ -1.32
CTNND1-229ENST00000531014 CD48P09326 243 aa6.84□□□□□ -1.32
CTNND1-229ENST00000531014 ZNF44P15621 663 aa6.84□□□□□ -1.32
CTNND1-229ENST00000531014 PBX3P40426 434 aa6.84□□□□□ -1.32
CTNND1-229ENST00000531014 GRM5P41594 1212 aa6.84□□□□□ -1.32
CTNND1-229ENST00000531014 BDKRB1P46663 353 aa6.84□□□□□ -1.32
CTNND1-229ENST00000531014 TOB1P50616 345 aaPredicted RBP6.84□□□□□ -1.32
CTNND1-229ENST00000531014 GPR143P51810 404 aa6.84□□□□□ -1.32
CTNND1-229ENST00000531014 CLDN6P56747 220 aa6.84□□□□□ -1.32
CTNND1-229ENST00000531014 ZNF266Q14584 549 aa6.84□□□□□ -1.32
CTNND1-229ENST00000531014 TMEM119Q4V9L6 283 aa6.84□□□□□ -1.32
CTNND1-229ENST00000531014 MRPL10Q7Z7H8 261 aaKnown RBP6.84□□□□□ -1.32
CTNND1-229ENST00000531014 RBMXL3Q8N7X1 1067 aaKnown RBP6.84□□□□□ -1.32
CTNND1-229ENST00000531014 FRMD1Q8N878 549 aa6.84□□□□□ -1.32
CTNND1-229ENST00000531014 FAM46AQ96IP4 442 aaKnown RBP6.84□□□□□ -1.32
CTNND1-229ENST00000531014 LRR1Q96L50 414 aa6.84□□□□□ -1.32
CTNND1-229ENST00000531014 PITX2Q99697 317 aa6.84□□□□□ -1.32
CTNND1-229ENST00000531014 DOHHQ9BU89 302 aa6.84□□□□□ -1.32
CTNND1-229ENST00000531014 ESRP2Q9H6T0 727 aaKnown RBP6.84□□□□□ -1.32
CTNND1-229ENST00000531014 SPACA1Q9HBV2 294 aa6.84□□□□□ -1.32
CTNND1-229ENST00000531014 HHATLQ9HCP6 504 aa6.84□□□□□ -1.32
CTNND1-229ENST00000531014 CPNE7Q9UBL6 633 aa6.84□□□□□ -1.32
CTNND1-229ENST00000531014 SARDHQ9UL12 918 aa6.84□□□□□ -1.32
CTNND1-229ENST00000531014 PCDHB3Q9Y5E6 796 aa6.84□□□□□ -1.32
CTNND1-229ENST00000531014 NUDT19A8MXV4 375 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 H0YIV9 168 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 TSPAN6O43657 245 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 GATCO43716 136 aaKnown RBP6.83□□□□□ -1.32
CTNND1-229ENST00000531014 RNASEH2AO75792 299 aaKnown RBP6.83□□□□□ -1.32
CTNND1-229ENST00000531014 HLA-AP01891 365 aaKnown RBP6.83□□□□□ -1.32
CTNND1-229ENST00000531014 FOLR1P15328 257 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 SPI1P17947 270 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 NAT1P18440 290 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 DDCP20711 480 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 NMBRP28336 390 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 PSMD8P48556 350 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 INHBCP55103 352 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 RPS18P62269 152 aaKnown RBP6.83□□□□□ -1.32
CTNND1-229ENST00000531014 LYSMD4Q5XG99 296 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 KCTD11Q693B1 232 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 C15orf39Q6ZRI6 1047 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 LARP4Q71RC2 724 aaKnown RBP eCLIP6.83□□□□□ -1.32
CTNND1-229ENST00000531014 LRRTM1Q86UE6 522 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 LIX1LQ8IVB5 337 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 OR4N5Q8IXE1 308 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 OR2T27Q8NH04 317 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 ZNF417Q8TAU3 575 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 NETO1Q8TDF5 533 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 TMEM125Q96AQ2 219 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 APH1AQ96BI3 265 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 PARD6AQ9NPB6 346 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 ACOXLQ9NUZ1 547 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 FAM118AQ9NWS6 357 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 WNT16Q9UBV4 365 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 FTSJ1Q9UET6 329 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 POU2F3Q9UKI9 436 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 RHBDD3Q9Y3P4 386 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 ITGB4P16144 1822 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 LY75O60449 1722 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 ZNF701M0R085 212 aaPredicted RBP6.83□□□□□ -1.32
CTNND1-229ENST00000531014 FAM189A1O60320 539 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 MRPS14O60783 128 aaKnown RBP6.83□□□□□ -1.32
CTNND1-229ENST00000531014 TMEM11P17152 192 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 KDELR2P33947 212 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 ETV3P41162 512 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 ACTR1BP42025 376 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 TAS2R19P59542 299 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 TATDN3Q17R31 274 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 FAM74A1Q5RGS3 127 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 PRAMEF14Q5SWL7 426 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 SLX4IPQ5VYV7 408 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 CPXM2Q8N436 756 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 OR6F1Q8NGZ6 308 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 OR2T4Q8NH00 348 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 MED18Q9BUE0 208 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 SLC12A9Q9BXP2 914 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 ISYNA1Q9NPH2 558 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 EIF2B3Q9NR50 452 aaKnown RBP6.83□□□□□ -1.32
CTNND1-229ENST00000531014 CUTCQ9NTM9 273 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 C19orf25Q9UFG5 118 aaPredicted RBP6.83□□□□□ -1.32
CTNND1-229ENST00000531014 SNED1Q8TER0 1413 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.83□□□□□ -1.32
CTNND1-229ENST00000531014 HAS3O00219 553 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 DENRO43583 198 aaKnown RBP6.83□□□□□ -1.32
CTNND1-229ENST00000531014 SRPX2O60687 465 aaPredicted RBP6.83□□□□□ -1.32
CTNND1-229ENST00000531014 DSC2Q02487 901 aa6.83□□□□□ -1.32
CTNND1-229ENST00000531014 ZNF90Q03938 601 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms