RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 TRBC2A0A5B9 178 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 ANKRD20A5PA0PJZ0 165 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 UBE2QL1A1L167 161 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 OR14I1A6ND48 311 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 SOX14O95416 240 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 CPSF4O95639 269 aaKnown RBP7.58□□□□□ -1.2
CSDE1-214ENST00000530886 ZNF35P13682 527 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 HIST1H1BP16401 226 aaKnown RBP7.58□□□□□ -1.2
CSDE1-214ENST00000530886 CTNNB1P35222 781 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 LHX1P48742 406 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 LILRA4P59901 499 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 MRPS10P82664 201 aaKnown RBP7.58□□□□□ -1.2
CSDE1-214ENST00000530886 BCL2L1Q07817 233 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 GANABQ14697 944 aaKnown RBP7.58□□□□□ -1.2
CSDE1-214ENST00000530886 SSPNQ14714 243 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 NKAPLQ5M9Q1 402 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 FAM182BQ5T319 152 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 ADNP2Q6IQ32 1131 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 ZNF322Q6U7Q0 402 aaPredicted RBP7.58□□□□□ -1.2
CSDE1-214ENST00000530886 ANGPTL8Q6UXH0 198 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 B3GLCTQ6Y288 498 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 C6orf120Q7Z4R8 191 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 PIANPQ8IYJ0 282 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 GPRC5AQ8NFJ5 357 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 OR2AK2Q8NG84 335 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 OR10H5Q8NGA6 315 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 OR4K2Q8NGD2 314 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 CXorf40BQ96DE9 158 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 SOX7Q9BT81 388 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 PDFQ9HBH1 243 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 GPBP1L1Q9HC44 474 aaPredicted RBP7.58□□□□□ -1.2
CSDE1-214ENST00000530886 MMP26Q9NRE1 261 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 UQCC1Q9NVA1 299 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 GFOD1Q9NXC2 390 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 RCC2Q9P258 522 aaKnown RBP7.58□□□□□ -1.2
CSDE1-214ENST00000530886 PCDHB1Q9Y5F3 818 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 DENND4CQ5VZ89 1909 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 TRAV14DV4A0A0A6YYC5 116 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 TRAV1-2A0A0B4J238 106 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 OR2W5A6NFC9 320 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 H7C0S8 307 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 TCAPO15273 167 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 LRATO95237 230 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 ARAFP10398 606 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 TXNP10599 105 aaKnown RBP7.58□□□□□ -1.2
CSDE1-214ENST00000530886 EPXP11678 715 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 XPAP23025 273 aaPredicted RBP7.58□□□□□ -1.2
CSDE1-214ENST00000530886 PPT1P50897 306 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 SLC7A9P82251 487 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 PRR5P85299 388 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 INSL4Q14641 139 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 CSRP2Q16527 193 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 DNM1P46Q6ZS02 220 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 OR1J4Q8NGS1 313 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 ACOT11Q8WXI4 607 aaPredicted RBP7.58□□□□□ -1.2
CSDE1-214ENST00000530886 ARL11Q969Q4 196 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 VRK1Q99986 396 aaPredicted RBP7.58□□□□□ -1.2
CSDE1-214ENST00000530886 MRPL37Q9BZE1 423 aaKnown RBP7.58□□□□□ -1.2
CSDE1-214ENST00000530886 METTL9Q9H1A3 318 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 XKR8Q9H6D3 395 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 FBXW2Q9UKT8 454 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 ATXN7L1Q9ULK2 861 aaPredicted RBP7.58□□□□□ -1.2
CSDE1-214ENST00000530886 PCDHGA5Q9Y5G8 931 aa7.58□□□□□ -1.2
CSDE1-214ENST00000530886 IGLV3-10A0A075B6K4 115 aa7.57□□□□□ -1.2
CSDE1-214ENST00000530886 ANHXE9PGG2 379 aa7.57□□□□□ -1.2
CSDE1-214ENST00000530886 IRAK2O43187 625 aa7.57□□□□□ -1.2
CSDE1-214ENST00000530886 HBP1O60381 514 aa7.57□□□□□ -1.2
CSDE1-214ENST00000530886 SH3BGRLO75368 114 aa7.57□□□□□ -1.2
CSDE1-214ENST00000530886 SLC25A12O75746 678 aa7.57□□□□□ -1.2
CSDE1-214ENST00000530886 PCDH8O95206 1070 aa7.57□□□□□ -1.2
CSDE1-214ENST00000530886 ACTL6AO96019 429 aa7.57□□□□□ -1.2
CSDE1-214ENST00000530886 LAMP1P11279 417 aa7.57□□□□□ -1.2
CSDE1-214ENST00000530886 MAXP61244 160 aa7.57□□□□□ -1.2
CSDE1-214ENST00000530886 PKIAP61925 76 aa7.57□□□□□ -1.2
CSDE1-214ENST00000530886 HGFACQ04756 655 aa7.57□□□□□ -1.2
CSDE1-214ENST00000530886 GINS1Q14691 196 aa7.57□□□□□ -1.2
CSDE1-214ENST00000530886 UBE2NLQ5JXB2 153 aa7.57□□□□□ -1.2
CSDE1-214ENST00000530886 SFRP4Q6FHJ7 346 aaPredicted RBP7.57□□□□□ -1.2
CSDE1-214ENST00000530886 SYT12Q8IV01 421 aa7.57□□□□□ -1.2
CSDE1-214ENST00000530886 ZSCAN1Q8NBB4 408 aa7.57□□□□□ -1.2
CSDE1-214ENST00000530886 DNAAF1Q8NEP3 725 aa7.57□□□□□ -1.2
CSDE1-214ENST00000530886 STOML3Q8TAV4 291 aa7.57□□□□□ -1.2
CSDE1-214ENST00000530886 EDAQ92838 391 aa7.57□□□□□ -1.2
CSDE1-214ENST00000530886 RFKQ969G6 155 aa7.57□□□□□ -1.2
CSDE1-214ENST00000530886 SCLYQ96I15 445 aa7.57□□□□□ -1.2
CSDE1-214ENST00000530886 OR1F2PQ96R84 312 aa7.57□□□□□ -1.2
CSDE1-214ENST00000530886 TSPAN10Q9H1Z9 355 aaPredicted RBP7.57□□□□□ -1.2
CSDE1-214ENST00000530886 NKIRAS2Q9NYR9 191 aa7.57□□□□□ -1.2
CSDE1-214ENST00000530886 RCE1Q9Y256 329 aa7.57□□□□□ -1.2
CSDE1-214ENST00000530886 SMIM28A0A1B0GU29 152 aa7.57□□□□□ -1.2
CSDE1-214ENST00000530886 FAM227AF5H4B4 570 aa7.57□□□□□ -1.2
CSDE1-214ENST00000530886 MKRN2OSH3BPM6 223 aa7.57□□□□□ -1.2
CSDE1-214ENST00000530886 TLR5O60602 858 aa7.57□□□□□ -1.2
CSDE1-214ENST00000530886 LY86O95711 162 aa7.57□□□□□ -1.2
CSDE1-214ENST00000530886 ATP1B1P05026 303 aa7.57□□□□□ -1.2
CSDE1-214ENST00000530886 HOXB5P09067 269 aa7.57□□□□□ -1.2
CSDE1-214ENST00000530886 APEHP13798 732 aaKnown RBP7.57□□□□□ -1.2
CSDE1-214ENST00000530886 ETFAP13804 333 aa7.57□□□□□ -1.2
CSDE1-214ENST00000530886 DPEP1P16444 411 aa7.57□□□□□ -1.2
CSDE1-214ENST00000530886 HOXA5P20719 270 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms