RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 GABRA4P48169 554 aa6.08□□□□□ -1.44
CSDE1-213ENST00000530784 CACNG1Q06432 222 aa6.08□□□□□ -1.44
CSDE1-213ENST00000530784 MSLNQ13421 630 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-213ENST00000530784 ITIH4Q14624 930 aa6.08□□□□□ -1.44
CSDE1-213ENST00000530784 SPA17Q15506 151 aa6.08□□□□□ -1.44
CSDE1-213ENST00000530784 ZIC1Q15915 447 aa6.08□□□□□ -1.44
CSDE1-213ENST00000530784 NKAIN1Q4KMZ8 207 aa6.08□□□□□ -1.44
CSDE1-213ENST00000530784 Q6ZS92 163 aa6.08□□□□□ -1.44
CSDE1-213ENST00000530784 TBC1D21Q8IYX1 336 aa6.08□□□□□ -1.44
CSDE1-213ENST00000530784 C17orf53Q8N3J3 647 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-213ENST00000530784 ZADH2Q8N4Q0 377 aa6.08□□□□□ -1.44
CSDE1-213ENST00000530784 OR5AR1Q8NGP9 310 aa6.08□□□□□ -1.44
CSDE1-213ENST00000530784 OR5K2Q8NHB8 316 aa6.08□□□□□ -1.44
CSDE1-213ENST00000530784 UBE2Q2Q8WVN8 375 aa6.08□□□□□ -1.44
CSDE1-213ENST00000530784 ELMO1Q92556 727 aa6.08□□□□□ -1.44
CSDE1-213ENST00000530784 DAZLQ92904 295 aaKnown RBP6.08□□□□□ -1.44
CSDE1-213ENST00000530784 PTERQ96BW5 349 aa6.08□□□□□ -1.44
CSDE1-213ENST00000530784 ALS2CR12Q96Q35 445 aa6.08□□□□□ -1.44
CSDE1-213ENST00000530784 CHRNA10Q9GZZ6 450 aa6.08□□□□□ -1.44
CSDE1-213ENST00000530784 LRRC40Q9H9A6 602 aa6.08□□□□□ -1.44
CSDE1-213ENST00000530784 AGPAT4Q9NRZ5 378 aa6.08□□□□□ -1.44
CSDE1-213ENST00000530784 NLE1Q9NVX2 485 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-213ENST00000530784 SPHK1Q9NYA1 384 aa6.08□□□□□ -1.44
CSDE1-213ENST00000530784 PSD3Q9NYI0 1048 aa6.08□□□□□ -1.44
CSDE1-213ENST00000530784 OR6C2Q9NZP2 312 aa6.08□□□□□ -1.44
CSDE1-213ENST00000530784 PLCL2Q9UPR0 1127 aa6.08□□□□□ -1.44
CSDE1-213ENST00000530784 TDRKHQ9Y2W6 561 aaKnown RBP6.08□□□□□ -1.44
CSDE1-213ENST00000530784 USP9YO00507 2555 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-213ENST00000530784 A0A1B0GX78 115 aa6.07□□□□□ -1.44
CSDE1-213ENST00000530784 hCG_1807616A0A1W2PRN6 198 aa6.07□□□□□ -1.44
CSDE1-213ENST00000530784 OR6C76A6NM76 312 aa6.07□□□□□ -1.44
CSDE1-213ENST00000530784 NR5A2O00482 541 aa6.07□□□□□ -1.44
CSDE1-213ENST00000530784 HCRTR1O43613 425 aa6.07□□□□□ -1.44
CSDE1-213ENST00000530784 AP2A1O95782 977 aa6.07□□□□□ -1.44
CSDE1-213ENST00000530784 PTMAP06454 111 aaKnown RBP6.07□□□□□ -1.44
CSDE1-213ENST00000530784 OR56A5P0C7T3 313 aa6.07□□□□□ -1.44
CSDE1-213ENST00000530784 ACP2P11117 423 aa6.07□□□□□ -1.44
CSDE1-213ENST00000530784 MAGP20916 626 aa6.07□□□□□ -1.44
CSDE1-213ENST00000530784 SAT1P21673 171 aa6.07□□□□□ -1.44
CSDE1-213ENST00000530784 ITGA3P26006 1051 aa6.07□□□□□ -1.44
CSDE1-213ENST00000530784 MSNP26038 577 aaKnown RBP6.07□□□□□ -1.44
CSDE1-213ENST00000530784 GCH1P30793 250 aa6.07□□□□□ -1.44
CSDE1-213ENST00000530784 RWDD2BP57060 319 aa6.07□□□□□ -1.44
CSDE1-213ENST00000530784 PLOD1Q02809 727 aaPredicted RBP6.07□□□□□ -1.44
CSDE1-213ENST00000530784 POU6F1Q14863 301 aa6.07□□□□□ -1.44
CSDE1-213ENST00000530784 SLC5A12Q1EHB4 618 aa6.07□□□□□ -1.44
CSDE1-213ENST00000530784 SH2D5Q6ZV89 423 aa6.07□□□□□ -1.44
CSDE1-213ENST00000530784 PCGF5Q86SE9 256 aa6.07□□□□□ -1.44
CSDE1-213ENST00000530784 PIANPQ8IYJ0 282 aa6.07□□□□□ -1.44
CSDE1-213ENST00000530784 POC5Q8NA72 575 aa6.07□□□□□ -1.44
CSDE1-213ENST00000530784 ST6GALNAC3Q8NDV1 305 aa6.07□□□□□ -1.44
CSDE1-213ENST00000530784 FLVCR1-AS1Q8TAF5 88 aa6.07□□□□□ -1.44
CSDE1-213ENST00000530784 WDR20Q8TBZ3 569 aa6.07□□□□□ -1.44
CSDE1-213ENST00000530784 CDKN2AIPNLQ96HQ2 116 aa6.07□□□□□ -1.44
CSDE1-213ENST00000530784 RANBP9Q96S59 729 aa6.07□□□□□ -1.44
CSDE1-213ENST00000530784 OSBPL8Q9BZF1 889 aa6.07□□□□□ -1.44
CSDE1-213ENST00000530784 PLAGL1Q9UM63 463 aa6.07□□□□□ -1.44
CSDE1-213ENST00000530784 TFR2Q9UP52 801 aa6.07□□□□□ -1.44
CSDE1-213ENST00000530784 UTP20O75691 2785 aaKnown RBP6.07□□□□□ -1.44
CSDE1-213ENST00000530784 USP9XQ93008 2570 aaPredicted RBP6.07□□□□□ -1.44
CSDE1-213ENST00000530784 TEX15Q9BXT5 2789 aa6.06□□□□□ -1.44
CSDE1-213ENST00000530784 TNRC6AQ8NDV7 1962 aaKnown RBP6.06□□□□□ -1.44
CSDE1-213ENST00000530784 UNC79Q9P2D8 2635 aa6.06□□□□□ -1.44
CSDE1-213ENST00000530784 SLC5A10A0PJK1 596 aa6.06□□□□□ -1.44
CSDE1-213ENST00000530784 OR51F1A6NGY5 319 aa6.06□□□□□ -1.44
CSDE1-213ENST00000530784 CTDSP2O14595 271 aa6.06□□□□□ -1.44
CSDE1-213ENST00000530784 RPN2P04844 631 aa6.06□□□□□ -1.44
CSDE1-213ENST00000530784 TPBGLP0DKB5 382 aa6.06□□□□□ -1.44
CSDE1-213ENST00000530784 MMP9P14780 707 aa6.06□□□□□ -1.44
CSDE1-213ENST00000530784 PORP16435 677 aaPredicted RBP6.06□□□□□ -1.44
CSDE1-213ENST00000530784 PTMSP20962 102 aa6.06□□□□□ -1.44
CSDE1-213ENST00000530784 MMP11P24347 488 aa6.06□□□□□ -1.44
CSDE1-213ENST00000530784 PEBP1P30086 187 aaKnown RBP6.06□□□□□ -1.44
CSDE1-213ENST00000530784 PKLRP30613 574 aa6.06□□□□□ -1.44
CSDE1-213ENST00000530784 FOXN2P32314 431 aa6.06□□□□□ -1.44
CSDE1-213ENST00000530784 CYLC1P35663 651 aaPredicted RBP6.06□□□□□ -1.44
CSDE1-213ENST00000530784 RAB28P51157 221 aa6.06□□□□□ -1.44
CSDE1-213ENST00000530784 PNLIPRP2P54317 469 aa6.06□□□□□ -1.44
CSDE1-213ENST00000530784 SNRPEP62304 92 aaKnown RBP6.06□□□□□ -1.44
CSDE1-213ENST00000530784 PARP6Q2NL67 630 aa6.06□□□□□ -1.44
CSDE1-213ENST00000530784 DNAJC21Q5F1R6 531 aaKnown RBP6.06□□□□□ -1.44
CSDE1-213ENST00000530784 AGAP7PQ5VUJ5 663 aa6.06□□□□□ -1.44
CSDE1-213ENST00000530784 KCTD11Q693B1 232 aa6.06□□□□□ -1.44
CSDE1-213ENST00000530784 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.06□□□□□ -1.44
CSDE1-213ENST00000530784 CCDC170Q8IYT3 715 aa6.06□□□□□ -1.44
CSDE1-213ENST00000530784 DNAJC22Q8N4W6 341 aa6.06□□□□□ -1.44
CSDE1-213ENST00000530784 SLC22A18Q96BI1 424 aa6.06□□□□□ -1.44
CSDE1-213ENST00000530784 CNDP1Q96KN2 507 aa6.06□□□□□ -1.44
CSDE1-213ENST00000530784 AGAP4Q96P64 663 aa6.06□□□□□ -1.44
CSDE1-213ENST00000530784 TSSK1BQ9BXA7 367 aa6.06□□□□□ -1.44
CSDE1-213ENST00000530784 WDR54Q9H977 334 aa6.06□□□□□ -1.44
CSDE1-213ENST00000530784 MRM3Q9HC36 420 aaKnown RBP6.06□□□□□ -1.44
CSDE1-213ENST00000530784 INTS10Q9NVR2 710 aaKnown RBP6.06□□□□□ -1.44
CSDE1-213ENST00000530784 EURLQ9NYK6 297 aa6.06□□□□□ -1.44
CSDE1-213ENST00000530784 COQ3Q9NZJ6 369 aa6.06□□□□□ -1.44
CSDE1-213ENST00000530784 NPAP1Q9NZP6 1156 aa6.06□□□□□ -1.44
CSDE1-213ENST00000530784 FBXL4Q9UKA2 621 aa6.06□□□□□ -1.44
CSDE1-213ENST00000530784 NXT1Q9UKK6 140 aaKnown RBP6.06□□□□□ -1.44
CSDE1-213ENST00000530784 NTNG1Q9Y2I2 539 aa6.06□□□□□ -1.44
CSDE1-213ENST00000530784 PRSS21Q9Y6M0 314 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms