RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 TAS2R41P59536 307 aa10.76□□□□□ -0.69
USP35-207ENST00000530546 BTG1P62324 171 aa10.76□□□□□ -0.69
USP35-207ENST00000530546 GNA13Q14344 377 aa10.76□□□□□ -0.69
USP35-207ENST00000530546 POU4F3Q15319 338 aa10.76□□□□□ -0.69
USP35-207ENST00000530546 METAP1DQ6UB28 335 aaPredicted RBP10.76□□□□□ -0.69
USP35-207ENST00000530546 PHC2Q8IXK0 858 aa10.76□□□□□ -0.69
USP35-207ENST00000530546 UBE2J2Q8N2K1 259 aa10.76□□□□□ -0.69
USP35-207ENST00000530546 FAM46DQ8NEK8 389 aa10.76□□□□□ -0.69
USP35-207ENST00000530546 SLC35A4Q96G79 324 aa10.76□□□□□ -0.69
USP35-207ENST00000530546 ZFYVE21Q9BQ24 234 aa10.76□□□□□ -0.69
USP35-207ENST00000530546 CLEC4MQ9H2X3 399 aaPredicted RBP10.76□□□□□ -0.69
USP35-207ENST00000530546 IFT22Q9H7X7 185 aa10.76□□□□□ -0.69
USP35-207ENST00000530546 CAPN10Q9HC96 672 aa10.76□□□□□ -0.69
USP35-207ENST00000530546 BCL2L10Q9HD36 194 aa10.76□□□□□ -0.69
USP35-207ENST00000530546 NDUFB11Q9NX14 153 aa10.76□□□□□ -0.69
USP35-207ENST00000530546 TVP23BQ9NYZ1 205 aa10.76□□□□□ -0.69
USP35-207ENST00000530546 KCMF1Q9P0J7 381 aa10.76□□□□□ -0.69
USP35-207ENST00000530546 OR5K4A6NMS3 321 aa10.75□□□□□ -0.69
USP35-207ENST00000530546 B4DGG1 531 aa10.75□□□□□ -0.69
USP35-207ENST00000530546 ADRA2AP08913 450 aa10.75□□□□□ -0.69
USP35-207ENST00000530546 F8A1P23610 371 aa10.75□□□□□ -0.69
USP35-207ENST00000530546 MMP11P24347 488 aa10.75□□□□□ -0.69
USP35-207ENST00000530546 RABIFP47224 123 aa10.75□□□□□ -0.69
USP35-207ENST00000530546 VSX2P58304 361 aaPredicted RBP10.75□□□□□ -0.69
USP35-207ENST00000530546 SMIM11AP58511 58 aa10.75□□□□□ -0.69
USP35-207ENST00000530546 MLLT1Q03111 559 aaPredicted RBP10.75□□□□□ -0.69
USP35-207ENST00000530546 SF3A2Q15428 464 aaKnown RBP10.75□□□□□ -0.69
USP35-207ENST00000530546 CASP12Q6UXS9 341 aa10.75□□□□□ -0.69
USP35-207ENST00000530546 ZER1Q7Z7L7 766 aa10.75□□□□□ -0.69
USP35-207ENST00000530546 LINC00469Q8N7U9 141 aa10.75□□□□□ -0.69
USP35-207ENST00000530546 TCEANCQ8N8B7 351 aa10.75□□□□□ -0.69
USP35-207ENST00000530546 CAMKVQ8NCB2 501 aa10.75□□□□□ -0.69
USP35-207ENST00000530546 OR9Q1Q8NGQ5 310 aa10.75□□□□□ -0.69
USP35-207ENST00000530546 UFD1Q92890 307 aa10.75□□□□□ -0.69
USP35-207ENST00000530546 MARC2Q969Z3 335 aa10.75□□□□□ -0.69
USP35-207ENST00000530546 MOAP1Q96BY2 351 aa10.75□□□□□ -0.69
USP35-207ENST00000530546 SERINC2Q96SA4 455 aa10.75□□□□□ -0.69
USP35-207ENST00000530546 GPA33Q99795 319 aa10.75□□□□□ -0.69
USP35-207ENST00000530546 ACTRT3Q9BYD9 372 aa10.75□□□□□ -0.69
USP35-207ENST00000530546 EMC7Q9NPA0 242 aa10.75□□□□□ -0.69
USP35-207ENST00000530546 ADAP2Q9NPF8 381 aa10.75□□□□□ -0.69
USP35-207ENST00000530546 NLKQ9UBE8 527 aa10.75□□□□□ -0.69
USP35-207ENST00000530546 MGAT4AQ9UM21 535 aa10.75□□□□□ -0.69
USP35-207ENST00000530546 ARRDC5A6NEK1 342 aa10.75□□□□□ -0.69
USP35-207ENST00000530546 CCDC85CA6NKD9 419 aa10.75□□□□□ -0.69
USP35-207ENST00000530546 C2orf74A8MZ97 194 aa10.75□□□□□ -0.69
USP35-207ENST00000530546 KHNYNO15037 678 aaKnown RBP10.75□□□□□ -0.69
USP35-207ENST00000530546 HK1P19367 917 aa10.75□□□□□ -0.69
USP35-207ENST00000530546 TLX1P31314 330 aaPredicted RBP10.75□□□□□ -0.69
USP35-207ENST00000530546 TRMT12Q53H54 448 aaKnown RBP10.75□□□□□ -0.69
USP35-207ENST00000530546 KIAA0895LQ68EN5 471 aa10.75□□□□□ -0.69
USP35-207ENST00000530546 FBXW5Q969U6 566 aa10.75□□□□□ -0.69
USP35-207ENST00000530546 TM4SF19Q96DZ7 209 aa10.75□□□□□ -0.69
USP35-207ENST00000530546 GSDMCQ9BYG8 508 aa10.75□□□□□ -0.69
USP35-207ENST00000530546 POLMQ9NP87 494 aaPredicted RBP10.75□□□□□ -0.69
USP35-207ENST00000530546 MAN2C1Q9NTJ4 1040 aa10.75□□□□□ -0.69
USP35-207ENST00000530546 DAPP1Q9UN19 280 aa10.75□□□□□ -0.69
USP35-207ENST00000530546 CLCA2Q9UQC9 943 aa10.75□□□□□ -0.69
USP35-207ENST00000530546 HS3ST3A1Q9Y663 406 aa10.75□□□□□ -0.69
USP35-207ENST00000530546 CLCA3PQ9Y6N3 262 aa10.75□□□□□ -0.69
USP35-207ENST00000530546 RNF215Q9Y6U7 377 aa10.75□□□□□ -0.69
USP35-207ENST00000530546 FANCMQ8IYD8 2048 aa10.75□□□□□ -0.69
USP35-207ENST00000530546 URADA6NGE7 173 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 FAM170BA6NMN3 283 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 HCRTR1O43613 425 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 ZIC2O95409 532 aaPredicted RBP10.74□□□□□ -0.69
USP35-207ENST00000530546 CTSBP07858 339 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 NT5EP21589 574 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 SHC2P98077 582 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 ZNF628Q5EBL2 1059 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 ABHD13Q7L211 337 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 ABI3BPQ7Z7G0 1075 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 TDHQ8IZJ6 230 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 Q8N402 240 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 LRRC17Q8N6Y2 441 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 TMEM52Q8NDY8 209 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 ATP6V1C2Q8NEY4 427 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 ST8SIA4Q92187 359 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 RSC1A1Q92681 617 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 PTP4A1Q93096 173 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 KLHL15Q96M94 604 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 CCDC3Q9BQI4 270 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 PINK1Q9BXM7 581 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 RBCK1Q9BYM8 510 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 SLC6A15Q9H2J7 730 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 GALNT9Q9HCQ5 603 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 PLEKHB1Q9UF11 243 aaPredicted RBP10.74□□□□□ -0.69
USP35-207ENST00000530546 ACAD8Q9UKU7 415 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 LSM2Q9Y333 95 aaKnown RBP10.74□□□□□ -0.69
USP35-207ENST00000530546 TDRD6O60522 2096 aaKnown RBP10.74□□□□□ -0.69
USP35-207ENST00000530546 ARPC4-TTLL3A0A0A6YYG9 625 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 INMT-MINDY4F8WBC2 141 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 TNFSF14O43557 240 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 SDC2P34741 201 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 BMP8BP34820 402 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 MAN2A2P49641 1150 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 ARFIP1P53367 373 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 PPP3R1P63098 170 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 S100A12P80511 92 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 ALDH6A1Q02252 535 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms