RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 DCTDP32321 178 aa11.65□□□□□ -0.54
TSKU-203ENST00000527881 CLDN12P56749 244 aa11.65□□□□□ -0.54
TSKU-203ENST00000527881 PDZK1IP1Q13113 114 aa11.65□□□□□ -0.54
TSKU-203ENST00000527881 RBMS2Q15434 407 aaKnown RBP11.65□□□□□ -0.54
TSKU-203ENST00000527881 PRSS53Q2L4Q9 553 aa11.65□□□□□ -0.54
TSKU-203ENST00000527881 TMEM44Q2T9K0 475 aa11.65□□□□□ -0.54
TSKU-203ENST00000527881 CMTM4Q8IZR5 234 aa11.65□□□□□ -0.54
TSKU-203ENST00000527881 C17orf47Q8NEP4 570 aa11.65□□□□□ -0.54
TSKU-203ENST00000527881 GPRC5AQ8NFJ5 357 aa11.65□□□□□ -0.54
TSKU-203ENST00000527881 OR4Q3Q8NH05 313 aa11.65□□□□□ -0.54
TSKU-203ENST00000527881 OR5J2Q8NH18 312 aa11.65□□□□□ -0.54
TSKU-203ENST00000527881 OSTF1Q92882 214 aa11.65□□□□□ -0.54
TSKU-203ENST00000527881 C4orf36Q96KX1 117 aa11.65□□□□□ -0.54
TSKU-203ENST00000527881 P2RX2Q9UBL9 471 aa11.65□□□□□ -0.54
TSKU-203ENST00000527881 A0A0G2JLL6 359 aaPredicted RBP11.65□□□□□ -0.54
TSKU-203ENST00000527881 OR2W5A6NFC9 320 aa11.65□□□□□ -0.54
TSKU-203ENST00000527881 NPIPB15A6NHN6 443 aaPredicted RBP11.65□□□□□ -0.54
TSKU-203ENST00000527881 LCMT2O60294 686 aaKnown RBP11.65□□□□□ -0.54
TSKU-203ENST00000527881 TBL1XO60907 577 aa11.65□□□□□ -0.54
TSKU-203ENST00000527881 ATP1B1P05026 303 aa11.65□□□□□ -0.54
TSKU-203ENST00000527881 HTR1FP30939 366 aa11.65□□□□□ -0.54
TSKU-203ENST00000527881 B4GALNT1Q00973 533 aa11.65□□□□□ -0.54
TSKU-203ENST00000527881 ZNF792Q3KQV3 632 aa11.65□□□□□ -0.54
TSKU-203ENST00000527881 ENTPD8Q5MY95 495 aa11.65□□□□□ -0.54
TSKU-203ENST00000527881 ZNF772Q68DY9 489 aaPredicted RBP11.65□□□□□ -0.54
TSKU-203ENST00000527881 H3F3CQ6NXT2 135 aa11.65□□□□□ -0.54
TSKU-203ENST00000527881 PRRT2Q7Z6L0 340 aaPredicted RBP11.65□□□□□ -0.54
TSKU-203ENST00000527881 DNAJB7Q7Z6W7 309 aaPredicted RBP11.65□□□□□ -0.54
TSKU-203ENST00000527881 ZNF546Q86UE3 836 aa11.65□□□□□ -0.54
TSKU-203ENST00000527881 SLC44A3Q8N4M1 653 aa11.65□□□□□ -0.54
TSKU-203ENST00000527881 EIF4E3Q8N5X7 224 aaKnown RBP11.65□□□□□ -0.54
TSKU-203ENST00000527881 APOBEC4Q8WW27 367 aaKnown RBP11.65□□□□□ -0.54
TSKU-203ENST00000527881 GHSRQ92847 366 aa11.65□□□□□ -0.54
TSKU-203ENST00000527881 ARL5BQ96KC2 179 aa11.65□□□□□ -0.54
TSKU-203ENST00000527881 SAMD8Q96LT4 415 aa11.65□□□□□ -0.54
TSKU-203ENST00000527881 TAS2R5Q9NYW4 299 aa11.65□□□□□ -0.54
TSKU-203ENST00000527881 MIOXQ9UGB7 285 aa11.65□□□□□ -0.54
TSKU-203ENST00000527881 KCNK7Q9Y2U2 307 aa11.65□□□□□ -0.54
TSKU-203ENST00000527881 PLEKHM1Q9Y4G2 1056 aa11.65□□□□□ -0.54
TSKU-203ENST00000527881 TRIP12Q14669 1992 aaPredicted RBP11.65□□□□□ -0.55
TSKU-203ENST00000527881 LRIT2A6NDA9 550 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 SULT1C2O00338 296 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 SMAD6O43541 496 aaKnown RBP11.64□□□□□ -0.55
TSKU-203ENST00000527881 NARSO43776 548 aaKnown RBP11.64□□□□□ -0.55
TSKU-203ENST00000527881 SC5DO75845 299 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 GJB5O95377 273 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 SERPIND1P05546 499 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 CNR1P21554 472 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 COMTD1Q86VU5 262 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 CPXM2Q8N436 756 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 ZSCAN1Q8NBB4 408 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 CPNE2Q96FN4 548 aaPredicted RBP11.64□□□□□ -0.55
TSKU-203ENST00000527881 DERL3Q96Q80 235 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 ZNF251Q9BRH9 671 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 ANKRD19PQ9H560 264 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 ZNF334Q9HCZ1 680 aaPredicted RBP11.64□□□□□ -0.55
TSKU-203ENST00000527881 TAAR2Q9P1P5 351 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 PCDHGA5Q9Y5G8 931 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 TRBV5-4A0A0C4DH59 114 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 ZNF821O75541 412 aaPredicted RBP11.64□□□□□ -0.55
TSKU-203ENST00000527881 CD52P31358 61 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 H2BFSP57053 126 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 RAB5BP61020 215 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 MRPS6P82932 125 aaKnown RBP11.64□□□□□ -0.55
TSKU-203ENST00000527881 TMEM69Q5SWH9 247 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 AADACL4Q5VUY2 407 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 C5orf46Q6UWT4 87 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 CMIPQ8IY22 773 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 BRIX1Q8TDN6 353 aaKnown RBP11.64□□□□□ -0.55
TSKU-203ENST00000527881 THEM6Q8WUY1 208 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 SLC25A28Q96A46 364 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 SCLYQ96I15 445 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 LRIG1Q96JA1 1093 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 RSPO3Q9BXY4 272 aaPredicted RBP11.64□□□□□ -0.55
TSKU-203ENST00000527881 TMPRSS13Q9BYE2 586 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 EXOSC3Q9NQT5 275 aaKnown RBP11.64□□□□□ -0.55
TSKU-203ENST00000527881 LTBP3Q9NS15 1303 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 TINAGQ9UJW2 476 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 DNAH12Q6ZR08 3092 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 ANTXRLA6NF34 631 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 OR6C65A6NJZ3 312 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 ZNF705EA8MWA4 302 aaPredicted RBP11.64□□□□□ -0.55
TSKU-203ENST00000527881 ADAM12O43184 909 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 ITGA10O75578 1167 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 AKR7A3O95154 331 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 SAGP10523 405 aaPredicted RBP11.64□□□□□ -0.55
TSKU-203ENST00000527881 ALPPL2P10696 532 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 ATP1B2P14415 290 aaPredicted RBP11.64□□□□□ -0.55
TSKU-203ENST00000527881 AP1S1P61966 158 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 SHC2P98077 582 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 DHODHQ02127 395 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 TSPAN31Q12999 210 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 PGGHGQ32M88 737 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 ZNF626Q68DY1 528 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 OR7E24Q6IFN5 339 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 FAM71E1Q6IPT2 247 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 TSSK4Q6SA08 328 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 CAMKVQ8NCB2 501 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 OR2T33Q8NG76 320 aa11.64□□□□□ -0.55
TSKU-203ENST00000527881 ORAI1Q96D31 301 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms