RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 OR2T11Q8NH01 316 aa6.84□□□□□ -1.31
CTNND1-216ENST00000527467 OR5AK2Q8NH90 309 aa6.84□□□□□ -1.31
CTNND1-216ENST00000527467 DYRK2Q92630 601 aa6.84□□□□□ -1.31
CTNND1-216ENST00000527467 TMEM74Q96NL1 305 aa6.84□□□□□ -1.31
CTNND1-216ENST00000527467 SDCBP2Q9H190 292 aa6.84□□□□□ -1.31
CTNND1-216ENST00000527467 PIGMQ9H3S5 423 aa6.84□□□□□ -1.31
CTNND1-216ENST00000527467 CLCF1Q9UBD9 225 aa6.84□□□□□ -1.31
CTNND1-216ENST00000527467 ADAM29Q9UKF5 820 aa6.84□□□□□ -1.31
CTNND1-216ENST00000527467 PIAS3Q9Y6X2 628 aa6.84□□□□□ -1.31
CTNND1-216ENST00000527467 U3KQ87 197 aa6.84□□□□□ -1.31
CTNND1-216ENST00000527467 SLX4Q8IY92 1834 aa6.84□□□□□ -1.31
CTNND1-216ENST00000527467 BTBD17A6NE02 478 aa6.84□□□□□ -1.32
CTNND1-216ENST00000527467 TRIM77I1YAP6 450 aa6.84□□□□□ -1.32
CTNND1-216ENST00000527467 J3KR12 359 aa6.84□□□□□ -1.32
CTNND1-216ENST00000527467 ARHGAP33O14559 1287 aa6.84□□□□□ -1.32
CTNND1-216ENST00000527467 HOXB5P09067 269 aa6.84□□□□□ -1.32
CTNND1-216ENST00000527467 CD48P09326 243 aa6.84□□□□□ -1.32
CTNND1-216ENST00000527467 ZNF44P15621 663 aa6.84□□□□□ -1.32
CTNND1-216ENST00000527467 PBX3P40426 434 aa6.84□□□□□ -1.32
CTNND1-216ENST00000527467 GRM5P41594 1212 aa6.84□□□□□ -1.32
CTNND1-216ENST00000527467 BDKRB1P46663 353 aa6.84□□□□□ -1.32
CTNND1-216ENST00000527467 TOB1P50616 345 aaPredicted RBP6.84□□□□□ -1.32
CTNND1-216ENST00000527467 GPR143P51810 404 aa6.84□□□□□ -1.32
CTNND1-216ENST00000527467 CLDN6P56747 220 aa6.84□□□□□ -1.32
CTNND1-216ENST00000527467 ZNF266Q14584 549 aa6.84□□□□□ -1.32
CTNND1-216ENST00000527467 TMEM119Q4V9L6 283 aa6.84□□□□□ -1.32
CTNND1-216ENST00000527467 MRPL10Q7Z7H8 261 aaKnown RBP6.84□□□□□ -1.32
CTNND1-216ENST00000527467 RBMXL3Q8N7X1 1067 aaKnown RBP6.84□□□□□ -1.32
CTNND1-216ENST00000527467 FRMD1Q8N878 549 aa6.84□□□□□ -1.32
CTNND1-216ENST00000527467 FAM46AQ96IP4 442 aaKnown RBP6.84□□□□□ -1.32
CTNND1-216ENST00000527467 LRR1Q96L50 414 aa6.84□□□□□ -1.32
CTNND1-216ENST00000527467 PITX2Q99697 317 aa6.84□□□□□ -1.32
CTNND1-216ENST00000527467 DOHHQ9BU89 302 aa6.84□□□□□ -1.32
CTNND1-216ENST00000527467 ESRP2Q9H6T0 727 aaKnown RBP6.84□□□□□ -1.32
CTNND1-216ENST00000527467 SPACA1Q9HBV2 294 aa6.84□□□□□ -1.32
CTNND1-216ENST00000527467 HHATLQ9HCP6 504 aa6.84□□□□□ -1.32
CTNND1-216ENST00000527467 CPNE7Q9UBL6 633 aa6.84□□□□□ -1.32
CTNND1-216ENST00000527467 SARDHQ9UL12 918 aa6.84□□□□□ -1.32
CTNND1-216ENST00000527467 PCDHB3Q9Y5E6 796 aa6.84□□□□□ -1.32
CTNND1-216ENST00000527467 NUDT19A8MXV4 375 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 H0YIV9 168 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 TSPAN6O43657 245 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 GATCO43716 136 aaKnown RBP6.83□□□□□ -1.32
CTNND1-216ENST00000527467 RNASEH2AO75792 299 aaKnown RBP6.83□□□□□ -1.32
CTNND1-216ENST00000527467 HLA-AP01891 365 aaKnown RBP6.83□□□□□ -1.32
CTNND1-216ENST00000527467 FOLR1P15328 257 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 SPI1P17947 270 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 NAT1P18440 290 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 DDCP20711 480 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 NMBRP28336 390 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 PSMD8P48556 350 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 INHBCP55103 352 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 RPS18P62269 152 aaKnown RBP6.83□□□□□ -1.32
CTNND1-216ENST00000527467 LYSMD4Q5XG99 296 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 KCTD11Q693B1 232 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 C15orf39Q6ZRI6 1047 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 LARP4Q71RC2 724 aaKnown RBP eCLIP6.83□□□□□ -1.32
CTNND1-216ENST00000527467 LRRTM1Q86UE6 522 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 LIX1LQ8IVB5 337 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 OR4N5Q8IXE1 308 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 FBXL16Q8N461 479 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 OR2T27Q8NH04 317 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 ZNF417Q8TAU3 575 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 NETO1Q8TDF5 533 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 TMEM125Q96AQ2 219 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 APH1AQ96BI3 265 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 PARD6AQ9NPB6 346 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 ACOXLQ9NUZ1 547 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 FAM118AQ9NWS6 357 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 WNT16Q9UBV4 365 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 FTSJ1Q9UET6 329 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 POU2F3Q9UKI9 436 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 RHBDD3Q9Y3P4 386 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 ITGB4P16144 1822 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 LY75O60449 1722 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 ZNF701M0R085 212 aaPredicted RBP6.83□□□□□ -1.32
CTNND1-216ENST00000527467 FAM189A1O60320 539 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 MRPS14O60783 128 aaKnown RBP6.83□□□□□ -1.32
CTNND1-216ENST00000527467 TMEM11P17152 192 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 KDELR2P33947 212 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 ETV3P41162 512 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 ACTR1BP42025 376 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 TAS2R19P59542 299 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 TATDN3Q17R31 274 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 FAM74A1Q5RGS3 127 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 PRAMEF14Q5SWL7 426 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 SLX4IPQ5VYV7 408 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 CPXM2Q8N436 756 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 OR6F1Q8NGZ6 308 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 OR2T4Q8NH00 348 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 MED18Q9BUE0 208 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 SLC12A9Q9BXP2 914 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 ISYNA1Q9NPH2 558 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 EIF2B3Q9NR50 452 aaKnown RBP6.83□□□□□ -1.32
CTNND1-216ENST00000527467 CUTCQ9NTM9 273 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 C19orf25Q9UFG5 118 aaPredicted RBP6.83□□□□□ -1.32
CTNND1-216ENST00000527467 SNED1Q8TER0 1413 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.83□□□□□ -1.32
CTNND1-216ENST00000527467 HAS3O00219 553 aa6.83□□□□□ -1.32
CTNND1-216ENST00000527467 DENRO43583 198 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms