RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 DUSP21Q9H596 190 aa3.44□□□□□ -1.86
CLNS1A-209ENST00000527299 ZNF385DQ9H6B1 395 aa3.44□□□□□ -1.86
CLNS1A-209ENST00000527299 EPHX3Q9H6B9 360 aa3.44□□□□□ -1.86
CLNS1A-209ENST00000527299 PPP1R3EQ9H7J1 279 aa3.44□□□□□ -1.86
CLNS1A-209ENST00000527299 KIR3DX1Q9H7L2 352 aa3.44□□□□□ -1.86
CLNS1A-209ENST00000527299 FBRSL1Q9HCM7 1045 aaKnown RBP3.44□□□□□ -1.86
CLNS1A-209ENST00000527299 SLAMF7Q9NQ25 335 aa3.44□□□□□ -1.86
CLNS1A-209ENST00000527299 PDGFCQ9NRA1 345 aa3.44□□□□□ -1.86
CLNS1A-209ENST00000527299 SLC6A13Q9NSD5 602 aa3.44□□□□□ -1.86
CLNS1A-209ENST00000527299 SLC35D1Q9NTN3 355 aa3.44□□□□□ -1.86
CLNS1A-209ENST00000527299 ACSS1Q9NUB1 689 aaPredicted RBP3.44□□□□□ -1.86
CLNS1A-209ENST00000527299 TDP1Q9NUW8 608 aa3.44□□□□□ -1.86
CLNS1A-209ENST00000527299 RBFOX1Q9NWB1 397 aaKnown RBP3.44□□□□□ -1.86
CLNS1A-209ENST00000527299 C14orf119Q9NWQ9 140 aa3.44□□□□□ -1.86
CLNS1A-209ENST00000527299 PDP1Q9P0J1 537 aaPredicted RBP3.44□□□□□ -1.86
CLNS1A-209ENST00000527299 POMT2Q9UKY4 750 aa3.44□□□□□ -1.86
CLNS1A-209ENST00000527299 STAP1Q9ULZ2 295 aa3.44□□□□□ -1.86
CLNS1A-209ENST00000527299 POFUT2Q9Y2G5 429 aa3.44□□□□□ -1.86
CLNS1A-209ENST00000527299 MRPS2Q9Y399 296 aaKnown RBP3.44□□□□□ -1.86
CLNS1A-209ENST00000527299 TPRKBQ9Y3C4 175 aa3.44□□□□□ -1.86
CLNS1A-209ENST00000527299 ALG6Q9Y672 507 aa3.44□□□□□ -1.86
CLNS1A-209ENST00000527299 LRP6O75581 1613 aa3.44□□□□□ -1.86
CLNS1A-209ENST00000527299 USP6P35125 1406 aa3.44□□□□□ -1.86
CLNS1A-209ENST00000527299 PRG4Q92954 1404 aaPredicted RBP3.44□□□□□ -1.86
CLNS1A-209ENST00000527299 SCN9AQ15858 1988 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 ERCC6L2Q5T890 1561 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 DIP2BQ9P265 1576 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 WDR81Q562E7 1941 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 BAZ2AQ9UIF9 1905 aaKnown RBP3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 A0A0A6YYH2 397 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 DHRS12A0PJE2 317 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 TMEM218A2RU14 115 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 C7orf66A4D0T2 115 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 OR2A25A4D2G3 310 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 OR6C68A6NDL8 312 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 CXorf65A6NEN9 183 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 A6NJ64 397 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 CDRT15L2A8MXV6 281 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 E7ESA3 106 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 H0Y8G0 127 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 SMLR1H3BR10 107 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 H7C417 338 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 LGALS8O00214 317 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 TP53I11O14683 189 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 IMPA2O14732 288 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 MEIS2O14770 477 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 SMAD9O15198 467 aaKnown RBP3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 EIF3DO15371 548 aaKnown RBP eCLIP3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 SLC16A4O15374 487 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 COCHO43405 550 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 MBTPS2O43462 519 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 AIREO43918 545 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 ICOSLGO75144 302 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 WBP4O75554 376 aaKnown RBP3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 ZMPSTE24O75844 475 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 KAT7O95251 611 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 FGF19O95750 216 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 CLIC3O95833 236 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 IL1AP01583 271 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 SERPINE1P05121 402 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 MELTFP08582 738 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 NPSP0C0P6 89 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 NBEAP1P0C6P0 100 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 OR2T7P0C7T2 308 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 TMIGD3P0DMS9 266 aaPredicted RBP3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 KITP10721 976 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 THRBP10828 461 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 HAPLN1P10915 354 aaPredicted RBP3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 CYP4B1P13584 511 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 PHKG2P15735 406 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 ENGP17813 658 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 NPR2P20594 1047 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 TBXA2RP21731 343 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 STOMP27105 288 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 EPHA8P29322 1005 aaPredicted RBP3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 TNFSF8P32971 234 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 TECP42680 631 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 MAGEA2P43356 314 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 GPR4P46093 362 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 PITPNBP48739 271 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 FMO5P49326 533 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 RORCP51449 518 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 CYP2J2P51589 502 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 CCR6P51684 374 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 NAPAP54920 295 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 EEFSECP57772 596 aaKnown RBP3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 SELENOVP59797 346 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 LSM3P62310 102 aaKnown RBP3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 TRA2BP62995 288 aaKnown RBP3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 IL5RAQ01344 420 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 TLE4Q04727 773 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 C2orf80Q0P641 193 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 TWF1Q12792 350 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 NOGQ13253 232 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 SKP2Q13309 424 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 DAG1Q14118 895 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 OPCMLQ14982 345 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 PEA15Q15121 130 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 TWIST1Q15672 202 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms