RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 MKS1Q9NXB0 559 aa12.65□□□□□ -0.38
CPSF1-201ENST00000526271 KLHL13Q9P2N7 655 aa12.65□□□□□ -0.38
CPSF1-201ENST00000526271 ICAM5Q9UMF0 924 aa12.65□□□□□ -0.38
CPSF1-201ENST00000526271 NPIPB9F8W1W9 429 aa12.64□□□□□ -0.39
CPSF1-201ENST00000526271 RSL1D1O76021 490 aaKnown RBP12.64□□□□□ -0.39
CPSF1-201ENST00000526271 KCNH1O95259 989 aa12.64□□□□□ -0.39
CPSF1-201ENST00000526271 ADAP00813 363 aa12.64□□□□□ -0.39
CPSF1-201ENST00000526271 CREB1P16220 341 aa12.64□□□□□ -0.39
CPSF1-201ENST00000526271 SDC1P18827 310 aa12.64□□□□□ -0.39
CPSF1-201ENST00000526271 TAC1P20366 129 aa12.64□□□□□ -0.39
CPSF1-201ENST00000526271 C21orf58P58505 322 aa12.64□□□□□ -0.39
CPSF1-201ENST00000526271 CLEC6AQ6EIG7 209 aa12.64□□□□□ -0.39
CPSF1-201ENST00000526271 B3GLCTQ6Y288 498 aa12.64□□□□□ -0.39
CPSF1-201ENST00000526271 DTX2Q86UW9 622 aa12.64□□□□□ -0.39
CPSF1-201ENST00000526271 C4orf33Q8N1A6 199 aa12.64□□□□□ -0.39
CPSF1-201ENST00000526271 CCNYL1Q8N7R7 359 aa12.64□□□□□ -0.39
CPSF1-201ENST00000526271 NUP43Q8NFH3 380 aa12.64□□□□□ -0.39
CPSF1-201ENST00000526271 CLHC1Q8NHS4 586 aa12.64□□□□□ -0.39
CPSF1-201ENST00000526271 ARL8AQ96BM9 186 aa12.64□□□□□ -0.39
CPSF1-201ENST00000526271 ZNF764Q96H86 408 aaPredicted RBP12.64□□□□□ -0.39
CPSF1-201ENST00000526271 CENPHQ9H3R5 247 aa12.64□□□□□ -0.39
CPSF1-201ENST00000526271 SSU72Q9NP77 194 aaKnown RBP12.64□□□□□ -0.39
CPSF1-201ENST00000526271 YAE1D1Q9NRH1 226 aa12.64□□□□□ -0.39
CPSF1-201ENST00000526271 BAIAP2L1Q9UHR4 511 aa12.64□□□□□ -0.39
CPSF1-201ENST00000526271 HEATR1Q9H583 2144 aaKnown RBP12.64□□□□□ -0.39
CPSF1-201ENST00000526271 GOLGA8QA0A0J9YX86 632 aa12.63□□□□□ -0.39
CPSF1-201ENST00000526271 GOLGA8OA6NCC3 632 aa12.63□□□□□ -0.39
CPSF1-201ENST00000526271 GOLGA8NF8WBI6 632 aa12.63□□□□□ -0.39
CPSF1-201ENST00000526271 COPEO14579 308 aa12.63□□□□□ -0.39
CPSF1-201ENST00000526271 AKAP10O43572 662 aa12.63□□□□□ -0.39
CPSF1-201ENST00000526271 TYROBPO43914 113 aa12.63□□□□□ -0.39
CPSF1-201ENST00000526271 TBX19O60806 448 aa12.63□□□□□ -0.39
CPSF1-201ENST00000526271 GLRA3O75311 464 aa12.63□□□□□ -0.39
CPSF1-201ENST00000526271 SYNGR4O95473 234 aa12.63□□□□□ -0.39
CPSF1-201ENST00000526271 PROCP04070 461 aa12.63□□□□□ -0.39
CPSF1-201ENST00000526271 CD3EP07766 207 aa12.63□□□□□ -0.39
CPSF1-201ENST00000526271 NTF4P34130 210 aa12.63□□□□□ -0.39
CPSF1-201ENST00000526271 CLK3P49761 638 aaKnown RBP12.63□□□□□ -0.39
CPSF1-201ENST00000526271 PRKAG1P54619 331 aa12.63□□□□□ -0.39
CPSF1-201ENST00000526271 PSMD4P55036 377 aaKnown RBP12.63□□□□□ -0.39
CPSF1-201ENST00000526271 IRX1P78414 480 aaPredicted RBP12.63□□□□□ -0.39
CPSF1-201ENST00000526271 SPOCK1Q08629 439 aa12.63□□□□□ -0.39
CPSF1-201ENST00000526271 ZNHIT3Q15649 155 aaPredicted RBP12.63□□□□□ -0.39
CPSF1-201ENST00000526271 RFTN2Q52LD8 501 aaPredicted RBP12.63□□□□□ -0.39
CPSF1-201ENST00000526271 C11orf71Q6IPW1 123 aa12.63□□□□□ -0.39
CPSF1-201ENST00000526271 ZYG11AQ6WRX3 759 aa12.63□□□□□ -0.39
CPSF1-201ENST00000526271 IKBIPQ70UQ0 350 aa12.63□□□□□ -0.39
CPSF1-201ENST00000526271 SLC22A9Q8IVM8 553 aa12.63□□□□□ -0.39
CPSF1-201ENST00000526271 CDRT4Q8N9R6 151 aa12.63□□□□□ -0.39
CPSF1-201ENST00000526271 STEAP2Q8NFT2 490 aa12.63□□□□□ -0.39
CPSF1-201ENST00000526271 OR10H5Q8NGA6 315 aa12.63□□□□□ -0.39
CPSF1-201ENST00000526271 B4GALNT2Q8NHY0 566 aa12.63□□□□□ -0.39
CPSF1-201ENST00000526271 FBXO27Q8NI29 283 aa12.63□□□□□ -0.39
CPSF1-201ENST00000526271 FAM76AQ8TAV0 307 aa12.63□□□□□ -0.39
CPSF1-201ENST00000526271 CDS1Q92903 461 aa12.63□□□□□ -0.39
CPSF1-201ENST00000526271 FAM120BQ96EK7 910 aaKnown RBP12.63□□□□□ -0.39
CPSF1-201ENST00000526271 ZNF300Q96RE9 604 aaPredicted RBP12.63□□□□□ -0.39
CPSF1-201ENST00000526271 PSD2Q9BQI7 771 aa12.63□□□□□ -0.39
CPSF1-201ENST00000526271 B3GALT5Q9Y2C3 310 aa12.63□□□□□ -0.39
CPSF1-201ENST00000526271 WBP11Q9Y2W2 641 aaKnown RBP12.63□□□□□ -0.39
CPSF1-201ENST00000526271 CENPVL1A0A0U1RR11 272 aa12.62□□□□□ -0.39
CPSF1-201ENST00000526271 A0A1W2PNR3 127 aa12.62□□□□□ -0.39
CPSF1-201ENST00000526271 A0A1W2PQD3 144 aa12.62□□□□□ -0.39
CPSF1-201ENST00000526271 TTC36A6NLP5 189 aa12.62□□□□□ -0.39
CPSF1-201ENST00000526271 C9JVG2 144 aa12.62□□□□□ -0.39
CPSF1-201ENST00000526271 SMAD9O15198 467 aaKnown RBP12.62□□□□□ -0.39
CPSF1-201ENST00000526271 PDPK1O15530 556 aa12.62□□□□□ -0.39
CPSF1-201ENST00000526271 TLX2O43763 284 aaPredicted RBP12.62□□□□□ -0.39
CPSF1-201ENST00000526271 H6PDO95479 791 aa12.62□□□□□ -0.39
CPSF1-201ENST00000526271 IGHV1-2P23083 117 aa12.62□□□□□ -0.39
CPSF1-201ENST00000526271 IDUAP35475 653 aa12.62□□□□□ -0.39
CPSF1-201ENST00000526271 FOXG1P55316 489 aaPredicted RBP12.62□□□□□ -0.39
CPSF1-201ENST00000526271 CARD18P57730 90 aa12.62□□□□□ -0.39
CPSF1-201ENST00000526271 SRSF2Q01130 221 aaKnown RBP12.62□□□□□ -0.39
CPSF1-201ENST00000526271 P2RY6Q15077 328 aa12.62□□□□□ -0.39
CPSF1-201ENST00000526271 KRTAP24-1Q3LI83 254 aa12.62□□□□□ -0.39
CPSF1-201ENST00000526271 KLHL26Q53HC5 615 aa12.62□□□□□ -0.39
CPSF1-201ENST00000526271 FCRLAQ7L513 359 aa12.62□□□□□ -0.39
CPSF1-201ENST00000526271 OLIG3Q7RTU3 272 aa12.62□□□□□ -0.39
CPSF1-201ENST00000526271 GPR119Q8TDV5 335 aa12.62□□□□□ -0.39
CPSF1-201ENST00000526271 HTRA1Q92743 480 aa12.62□□□□□ -0.39
CPSF1-201ENST00000526271 ZNF775Q96BV0 537 aaPredicted RBP12.62□□□□□ -0.39
CPSF1-201ENST00000526271 APOPT1Q96IL0 206 aa12.62□□□□□ -0.39
CPSF1-201ENST00000526271 ATP6V1G3Q96LB4 118 aa12.62□□□□□ -0.39
CPSF1-201ENST00000526271 MS4A4EQ96PG1 132 aa12.62□□□□□ -0.39
CPSF1-201ENST00000526271 TSSK3Q96PN8 268 aa12.62□□□□□ -0.39
CPSF1-201ENST00000526271 BCO1Q9HAY6 547 aa12.62□□□□□ -0.39
CPSF1-201ENST00000526271 C3orf14Q9HBI5 128 aa12.62□□□□□ -0.39
CPSF1-201ENST00000526271 UBQLN4Q9NRR5 601 aa12.62□□□□□ -0.39
CPSF1-201ENST00000526271 PAQR5Q9NXK6 330 aaPredicted RBP12.62□□□□□ -0.39
CPSF1-201ENST00000526271 GIN1Q9NXP7 522 aa12.62□□□□□ -0.39
CPSF1-201ENST00000526271 GIMAP2Q9UG22 337 aa12.62□□□□□ -0.39
CPSF1-201ENST00000526271 KCNE5Q9UJ90 142 aa12.62□□□□□ -0.39
CPSF1-201ENST00000526271 MRTO4Q9UKD2 239 aaKnown RBP12.62□□□□□ -0.39
CPSF1-201ENST00000526271 E7EQL1 145 aa12.61□□□□□ -0.39
CPSF1-201ENST00000526271 ETV2O00321 342 aaPredicted RBP12.61□□□□□ -0.39
CPSF1-201ENST00000526271 ZNF195O14628 629 aa12.61□□□□□ -0.39
CPSF1-201ENST00000526271 PHF1O43189 567 aaPredicted RBP12.61□□□□□ -0.39
CPSF1-201ENST00000526271 SPAG7O75391 227 aa12.61□□□□□ -0.39
CPSF1-201ENST00000526271 LYZL6O75951 148 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms