RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 AQP5P55064 265 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 CBX1P83916 185 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 HMGCS1Q01581 520 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 EGR4Q05215 589 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 EIF3IQ13347 325 aaKnown RBP4.14□□□□□ -1.75
USP48-211ENST00000526044 CUL3Q13618 768 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 C16orf72Q14CZ0 275 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 TBCEQ15813 527 aaPredicted RBP4.14□□□□□ -1.75
USP48-211ENST00000526044 ZNF674Q2M3X9 581 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 DEFB110Q30KQ9 67 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 ANKDD1AQ495B1 522 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 ATP6AP1LQ52LC2 224 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 TMEM35AQ53FP2 167 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 TOR1AIP1Q5JTV8 583 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 TCHHL1Q5QJ38 904 aaPredicted RBP4.14□□□□□ -1.75
USP48-211ENST00000526044 DCAF12Q5T6F0 453 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 HES3Q5TGS1 186 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 GARNL3Q5VVW2 1013 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 KHDRBS2Q5VWX1 349 aaKnown RBP4.14□□□□□ -1.75
USP48-211ENST00000526044 OR4C11Q6IEV9 310 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 ADNP2Q6IQ32 1131 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 TRIM40Q6P9F5 258 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 CCBE1Q6UXH8 406 aaPredicted RBP4.14□□□□□ -1.75
USP48-211ENST00000526044 RNF165Q6ZSG1 346 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 Q6ZSR9 355 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 MEPCEQ7L2J0 689 aaKnown RBP4.14□□□□□ -1.75
USP48-211ENST00000526044 PRSS45Q7RTY3 260 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 SZRD1Q7Z422 152 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 VN1R4Q7Z5H5 301 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.14□□□□□ -1.75
USP48-211ENST00000526044 RNF175Q8N4F7 328 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 TTC29Q8NA56 475 aaPredicted RBP4.14□□□□□ -1.75
USP48-211ENST00000526044 OR8K5Q8NH50 307 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 OR1L3Q8NH93 324 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 RFWD2Q8NHY2 731 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 WDR36Q8NI36 951 aaKnown RBP4.14□□□□□ -1.75
USP48-211ENST00000526044 NT5CQ8TCD5 201 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 RAB40AQ8WXH6 277 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 ADAMTS14Q8WXS8 1223 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 TUBGCP3Q96CW5 907 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 ZNF501Q96CX3 271 aaPredicted RBP4.14□□□□□ -1.75
USP48-211ENST00000526044 MS4A6EQ96DS6 147 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 C19orf60Q96EN9 201 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 THOC1Q96FV9 657 aaKnown RBP4.14□□□□□ -1.75
USP48-211ENST00000526044 SMIM10Q96HG1 83 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 METTL2AQ96IZ6 378 aaKnown RBP4.14□□□□□ -1.75
USP48-211ENST00000526044 ZNF479Q96JC4 524 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 PPP3R2Q96LZ3 170 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 RILPQ96NA2 401 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 ZNF285Q96NJ3 590 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 F2RL3Q96RI0 385 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 CCT8L2Q96SF2 557 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 SIKE1Q9BRV8 207 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 TBCDQ9BTW9 1192 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 MS4A8Q9BY19 250 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 NUF2Q9BZD4 464 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 ROGDIQ9GZN7 287 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 FAM107BQ9H098 131 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 TUBB1Q9H4B7 451 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 WDR55Q9H6Y2 383 aaPredicted RBP4.14□□□□□ -1.75
USP48-211ENST00000526044 LIN28AQ9H9Z2 209 aaKnown RBP4.14□□□□□ -1.75
USP48-211ENST00000526044 MEAF6Q9HAF1 191 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 KCNK13Q9HB14 408 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 FANCFQ9NPI8 374 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 HPF1Q9NWY4 346 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 SLC39A1Q9NY26 324 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 RARRES3Q9UL19 164 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 CDC14AQ9UNH5 594 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 SLC22A7Q9Y694 548 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 PTPRBP23467 1997 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 GOLGA4Q13439 2230 aaKnown RBP4.14□□□□□ -1.75
USP48-211ENST00000526044 LAMA1P25391 3075 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 GOLGA8QA0A0J9YX86 632 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 FAM149AA5PLN7 773 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 GOLGA8OA6NCC3 632 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 PTGES3LE9PB15 166 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 GOLGA8NF8WBI6 632 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 SDHDO14521 159 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 LSM1O15116 133 aaKnown RBP4.13□□□□□ -1.75
USP48-211ENST00000526044 ZNF749O43361 778 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 ERI3O43414 337 aaKnown RBP4.13□□□□□ -1.75
USP48-211ENST00000526044 SHOX2O60902 331 aaPredicted RBP4.13□□□□□ -1.75
USP48-211ENST00000526044 SCRG1O75711 98 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 RSL1D1O76021 490 aaKnown RBP4.13□□□□□ -1.75
USP48-211ENST00000526044 ETHE1O95571 254 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 TBX6O95947 436 aaPredicted RBP4.13□□□□□ -1.75
USP48-211ENST00000526044 FAM107AO95990 144 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 KLK1P06870 262 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 HBQ1P09105 142 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 FGF5P12034 268 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 LBPP18428 481 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 ZNF10P21506 573 aaPredicted RBP4.13□□□□□ -1.75
USP48-211ENST00000526044 TLX1P31314 330 aaPredicted RBP4.13□□□□□ -1.75
USP48-211ENST00000526044 HNRNPH1P31943 449 aaKnown RBP4.13□□□□□ -1.75
USP48-211ENST00000526044 TSFMP43897 325 aaKnown RBP4.13□□□□□ -1.75
USP48-211ENST00000526044 CENPAP49450 140 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 PCYT1AP49585 367 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 ALDH3A2P51648 485 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 PDX1P52945 283 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 ARFIP1P53367 373 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms