RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 KIAA1024LP59773 190 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 YWHAGP61981 247 aaKnown RBP eCLIP3.14□□□□□ -1.91
CD44-219ENST00000525685 RPS27AP62979 156 aaKnown RBP3.14□□□□□ -1.91
CD44-219ENST00000525685 RUNX3Q13761 415 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 FASTKQ14296 549 aaKnown RBP3.14□□□□□ -1.91
CD44-219ENST00000525685 LPAL2Q16609 132 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 C10orf120Q5SQS8 335 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 CAPN13Q6MZZ7 669 aaPredicted RBP3.14□□□□□ -1.91
CD44-219ENST00000525685 C16orf87Q6PH81 154 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 CD164L2Q6UWJ8 174 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 CYP4V2Q6ZWL3 525 aaPredicted RBP3.14□□□□□ -1.91
CD44-219ENST00000525685 RAPH1Q70E73 1250 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 TMEM110Q86TL2 294 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 LCA5Q86VQ0 697 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 ZNF677Q86XU0 584 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 MFSD6LQ8IWD5 586 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 IQCF2Q8IXL9 164 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 ARHGAP18Q8N392 663 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 SPEM1Q8N4L4 309 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 NAT8LQ8N9F0 302 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 TMEM35BQ8NCS4 154 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 C8orf46Q8TAG6 207 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 DQX1Q8TE96 717 aaKnown RBP3.14□□□□□ -1.91
CD44-219ENST00000525685 SAP25Q8TEE9 199 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 PTP4A1Q93096 173 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 TOMM40LQ969M1 308 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 ESAMQ96AP7 390 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 TAAR6Q96RI8 345 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 CPXM1Q96SM3 734 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 C11orf70Q9BRQ4 267 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 RAB11FIP5Q9BXF6 653 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 NACA2Q9H009 215 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 LHX5Q9H2C1 402 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 FNDC4Q9H6D8 234 aaPredicted RBP3.14□□□□□ -1.91
CD44-219ENST00000525685 ELL3Q9HB65 397 aaPredicted RBP3.14□□□□□ -1.91
CD44-219ENST00000525685 HEBP1Q9NRV9 189 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 DEPPQ9NTK1 212 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 EIF3KQ9UBQ5 218 aaKnown RBP3.14□□□□□ -1.91
CD44-219ENST00000525685 CTSZQ9UBR2 303 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 MRTO4Q9UKD2 239 aaKnown RBP3.14□□□□□ -1.91
CD44-219ENST00000525685 KLK13Q9UKR3 277 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 TP53BP1Q12888 1972 aaPredicted RBP3.14□□□□□ -1.91
CD44-219ENST00000525685 BRWD1Q9NSI6 2320 aa3.14□□□□□ -1.91
CD44-219ENST00000525685 COL6A3P12111 3177 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 MUC22E2RYF6 1773 aaPredicted RBP3.13□□□□□ -1.91
CD44-219ENST00000525685 PRUNE2Q8WUY3 3088 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 A0A1B0GTH9 108 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 ACOD1A6NK06 481 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 TRIM64CA6NLI5 447 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 SPECC1L-ADORA2AF8WAN1 911 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 GOLGA8SH3BPF8 625 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 RTN2O75298 545 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 ANXA9O76027 345 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 LSM8O95777 96 aaKnown RBP3.13□□□□□ -1.91
CD44-219ENST00000525685 IGLV3-25P01717 112 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 IGLV3-27P01718 113 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 TPM3P06753 285 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 PLEKP08567 350 aaPredicted RBP3.13□□□□□ -1.91
CD44-219ENST00000525685 NUDT17P0C025 328 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 TPBGLP0DKB5 382 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 B4GALT1P15291 398 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 ATP6V1B1P15313 513 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 OAS2P29728 719 aaKnown RBP3.13□□□□□ -1.91
CD44-219ENST00000525685 CASP14P31944 242 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 SPRP35270 261 aaPredicted RBP3.13□□□□□ -1.91
CD44-219ENST00000525685 ATP5C1P36542 298 aaKnown RBP3.13□□□□□ -1.91
CD44-219ENST00000525685 NSFP46459 744 aaKnown RBP3.13□□□□□ -1.91
CD44-219ENST00000525685 SULT1E1P49888 294 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 GEMP55040 296 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 VCPP55072 806 aaKnown RBP3.13□□□□□ -1.91
CD44-219ENST00000525685 STARD6P59095 220 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 ARF5P84085 180 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 ACY1Q03154 408 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 WASHC5Q12768 1159 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 HEPACAMQ14CZ8 416 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 PDGFRLQ15198 375 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 SGCBQ16585 318 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 C2orf76Q3KRA6 126 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 AARDQ4LEZ3 155 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 TMEM31Q5JXX7 168 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 C1orf189Q5VU69 101 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 SYPL2Q5VXT5 272 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 OR6B2Q6IFH4 312 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 ZNF571Q7Z3V5 609 aaPredicted RBP3.13□□□□□ -1.91
CD44-219ENST00000525685 PRSS42Q7Z5A4 293 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 TAC4Q86UU9 113 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 P2RY8Q86VZ1 359 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 SNX32Q86XE0 403 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 PHF13Q86YI8 300 aaPredicted RBP3.13□□□□□ -1.91
CD44-219ENST00000525685 VSTM4Q8IW00 320 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 BBS7Q8IWZ6 715 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 DEFB106AQ8N104 65 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 Q8N377 158 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 CHCHD4Q8N4Q1 142 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 TMEM105Q8N8V8 129 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 CLEC1AQ8NC01 280 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 MNS1Q8NEH6 495 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 ZNF397Q8NF99 534 aaPredicted RBP3.13□□□□□ -1.91
CD44-219ENST00000525685 RNF139Q8WU17 664 aa3.13□□□□□ -1.91
CD44-219ENST00000525685 UBTD2Q8WUN7 234 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms