RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 STARD5Q9NSY2 213 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 SYBUQ9NX95 663 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 ASIC5Q9NY37 505 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 TAS2R7Q9NYW3 318 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 WARS2Q9UGM6 360 aaKnown RBP4.03□□□□□ -1.76
CD44-213ENST00000525209 KIF25Q9UIL4 384 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 FBXL2Q9UKC9 423 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 PADI3Q9ULW8 664 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 ADAMTS5Q9UNA0 930 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 NPIPA1Q9UND3 350 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 FAF1Q9UNN5 650 aaPredicted RBP4.03□□□□□ -1.76
CD44-213ENST00000525209 OR1A2Q9Y585 309 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 TSSC4Q9Y5U2 329 aaPredicted RBP4.03□□□□□ -1.76
CD44-213ENST00000525209 PEX16Q9Y5Y5 336 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 SPIN1Q9Y657 262 aaPredicted RBP4.03□□□□□ -1.76
CD44-213ENST00000525209 EFCAB6Q5THR3 1501 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 FYCO1Q9BQS8 1478 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 KIAA1107Q9UPP5 1409 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 RPAP1Q9BWH6 1393 aaPredicted RBP4.02□□□□□ -1.77
CD44-213ENST00000525209 TMEM2Q9UHN6 1383 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 LRP5LA4QPB2 252 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 SERINC4A6NH21 518 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 MARCH11A6NNE9 402 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 H3BN98 237 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 PRKAB2O43741 272 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 CHST1O43916 411 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 GPR137BO60478 399 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 SRPX2O60687 465 aaPredicted RBP4.02□□□□□ -1.77
CD44-213ENST00000525209 HUS1O60921 280 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 PRKRAO75569 313 aaKnown RBP4.02□□□□□ -1.77
CD44-213ENST00000525209 FCN3O75636 299 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 ZMPSTE24O75844 475 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 TMEM50AO95807 157 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 ASS1P00966 412 aaKnown RBP4.02□□□□□ -1.77
CD44-213ENST00000525209 NR3C1P04150 777 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 SLC35G4P0C7Q5 338 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 ELFN1P0C7U0 828 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 PMCHP20382 165 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 PRPS1L1P21108 318 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 SYT1P21579 422 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 BGNP21810 368 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 RBMS1P29558 406 aaKnown RBP4.02□□□□□ -1.77
CD44-213ENST00000525209 PRDX3P30048 256 aaKnown RBP4.02□□□□□ -1.77
CD44-213ENST00000525209 BDKRB2P30411 391 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 CCKBRP32239 447 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 GTF2H1P32780 548 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 SFTPDP35247 375 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 UGT2B10P36537 528 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 HPCAL1P37235 193 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 PIGAP37287 484 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 MNDAP41218 407 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 MAGEA2P43356 314 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 SGSHP51688 502 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 NUP107P57740 925 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 MLF1P58340 268 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 OSTNP61366 133 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 VSNL1P62760 191 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 KCNJ2P63252 427 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 TUBA4AP68366 448 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 MRPS25P82663 173 aaKnown RBP4.02□□□□□ -1.77
CD44-213ENST00000525209 GPR50Q13585 617 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 CEACAM7Q14002 265 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 TFDP1Q14186 410 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 CDSNQ15517 529 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 FAM189A2Q15884 450 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 TNXAQ16473 311 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 QRICH1Q2TAL8 776 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 SNAI3Q3KNW1 292 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 SPDYE7PQ495Y7 208 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 ALG10Q5BKT4 473 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 ALG10BQ5I7T1 473 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 DMKNQ6E0U4 476 aaPredicted RBP4.02□□□□□ -1.77
CD44-213ENST00000525209 C22orf42Q6IC83 251 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 NEPROQ6NW34 567 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 KCTD18Q6PI47 426 aaPredicted RBP4.02□□□□□ -1.77
CD44-213ENST00000525209 TMEM65Q6PI78 240 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 CD300LGQ6UXG3 332 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 ZNF562Q6V9R5 426 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 TMPRSS11AQ6ZMR5 421 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 RBM44Q6ZP01 1051 aaKnown RBP4.02□□□□□ -1.77
CD44-213ENST00000525209 RTL4Q6ZR62 310 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 Q7L0L9 218 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 COX8CQ7Z4L0 72 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 ANKRD37Q7Z713 158 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 MOB3BQ86TA1 216 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 ERICH1Q86X53 443 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 ERI1Q8IV48 349 aaKnown RBP4.02□□□□□ -1.77
CD44-213ENST00000525209 ZNF100Q8IYN0 542 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 BOD1L2Q8IYS8 172 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 ZBED8Q8IZ13 594 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 LGI2Q8N0V4 545 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 LRRC57Q8N9N7 239 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 TERB1Q8NA31 727 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 ADAD2Q8NCV1 583 aaKnown RBP4.02□□□□□ -1.77
CD44-213ENST00000525209 PPFIBP2Q8ND30 876 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 OR5D18Q8NGL1 313 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 OR13J1Q8NGT2 312 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 OR52E5Q8NH55 327 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 FGFBP3Q8TAT2 258 aa4.02□□□□□ -1.77
CD44-213ENST00000525209 HMGCLL1Q8TB92 370 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms