RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 STN1Q9H668 368 aaKnown RBP2.72□□□□□ -1.97
CSDE1-208ENST00000524652 NOL11Q9H8H0 719 aaKnown RBP2.72□□□□□ -1.97
CSDE1-208ENST00000524652 CNOT10Q9H9A5 744 aaKnown RBP2.72□□□□□ -1.97
CSDE1-208ENST00000524652 MRPS30Q9NP92 439 aaKnown RBP2.72□□□□□ -1.97
CSDE1-208ENST00000524652 SCRT2Q9NQ03 307 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 ASCL3Q9NQ33 180 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 LHX9Q9NQ69 397 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 KLHL1Q9NR64 748 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 DNAJC11Q9NVH1 559 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 CISD1Q9NZ45 108 aaKnown RBP2.72□□□□□ -1.97
CSDE1-208ENST00000524652 KIF17Q9P2E2 1029 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 OPTCQ9UBM4 332 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 DCDC2Q9UHG0 476 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 ZDHHC2Q9UIJ5 367 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 SATB2Q9UPW6 733 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 TIMM22Q9Y584 194 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 KLK4Q9Y5K2 254 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 A3GALT2U3KPV4 340 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 FLNCQ14315 2725 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 NOTCH1P46531 2555 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 URB1O60287 2271 aaKnown RBP2.72□□□□□ -1.97
CSDE1-208ENST00000524652 NINQ8N4C6 2090 aa2.72□□□□□ -1.97
CSDE1-208ENST00000524652 LRRK2Q5S007 2527 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 A0A0G2JN53 185 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 TRBC2A0A5B9 178 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 ASPDHA6ND91 283 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 SYCE1LA8MT33 242 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 MAGEB17A8MXT2 336 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 CDRT15L2A8MXV6 281 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 HMGB1P1B2RPK0 211 aaPredicted RBP2.71□□□□□ -1.98
CSDE1-208ENST00000524652 TMEM150CB9EJG8 249 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 H0YGG7 62 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 H0YIV9 168 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 SAP18O00422 153 aaKnown RBP2.71□□□□□ -1.98
CSDE1-208ENST00000524652 RTCAO00442 366 aaKnown RBP2.71□□□□□ -1.98
CSDE1-208ENST00000524652 ZNF195O14628 629 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 TM9SF1O15321 606 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 TOX3O15405 576 aaPredicted RBP2.71□□□□□ -1.98
CSDE1-208ENST00000524652 ZNF749O43361 778 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 SMIM24O75264 130 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 SNNO75324 88 aaPredicted RBP2.71□□□□□ -1.98
CSDE1-208ENST00000524652 SH3BGRLO75368 114 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 ZWINTO95229 277 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 PDYNP01213 254 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 CAPN1P07384 714 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 SMIM10L1P0DMW3 83 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 C1GALT1C1LP0DN25 315 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 MYL2P10916 166 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 FGF5P12034 268 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 CD1EP15812 388 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 NR1D1P20393 614 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 CMPK1P30085 196 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 CASP2P42575 452 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 PPM1FP49593 454 aaPredicted RBP2.71□□□□□ -1.98
CSDE1-208ENST00000524652 SLC18A1P54219 525 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 VSX2P58304 361 aaPredicted RBP2.71□□□□□ -1.98
CSDE1-208ENST00000524652 DNAJB13P59910 316 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 ARF3P61204 181 aaPredicted RBP2.71□□□□□ -1.98
CSDE1-208ENST00000524652 BST1Q10588 318 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 PRKAA1Q13131 559 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 BIRC2Q13490 618 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 TRA2AQ13595 282 aaKnown RBP eCLIP2.71□□□□□ -1.98
CSDE1-208ENST00000524652 RCN2Q14257 317 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 ABRAXAS2Q15018 415 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 TGIF1Q15583 401 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 ZRSR2Q15696 482 aaKnown RBP2.71□□□□□ -1.98
CSDE1-208ENST00000524652 CHI3L2Q15782 390 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 RBBP7Q16576 425 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 UGT3A2Q3SY77 523 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 GGTA1PQ4G0N0 100 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 XKR6Q5GH73 641 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 LIPJQ5W064 366 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 TTC19Q6DKK2 380 aaPredicted RBP2.71□□□□□ -1.98
CSDE1-208ENST00000524652 CAPN13Q6MZZ7 669 aaPredicted RBP2.71□□□□□ -1.98
CSDE1-208ENST00000524652 PWWP2BQ6NUJ5 590 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 KLC3Q6P597 504 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 FAM199XQ6PEV8 388 aaPredicted RBP2.71□□□□□ -1.98
CSDE1-208ENST00000524652 SCIMPQ6UWF3 145 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 TMIGD1Q6UXZ0 262 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 Q6ZSR9 355 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 COX15Q7KZN9 410 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 LRRC70Q7Z2Q7 622 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 TIPARPQ7Z3E1 657 aaKnown RBP2.71□□□□□ -1.98
CSDE1-208ENST00000524652 ADCK2Q7Z695 626 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 C17orf64Q86WR6 236 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 NUDCD3Q8IVD9 361 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 CIARTQ8N365 385 aaPredicted RBP2.71□□□□□ -1.98
CSDE1-208ENST00000524652 TCAIMQ8N3R3 496 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 METTL27Q8N6F8 245 aaPredicted RBP2.71□□□□□ -1.98
CSDE1-208ENST00000524652 CCNYL1Q8N7R7 359 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 ZNF781Q8N8C0 355 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 SNX31Q8N9S9 440 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 L3MBTL4Q8NA19 623 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 CCDC63Q8NA47 563 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 MFSD9Q8NBP5 474 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 SCCPDHQ8NBX0 429 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 OR7G3Q8NG95 312 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 OR13A1Q8NGR1 328 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 OR2T11Q8NH01 316 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms