RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	SMS	P52788	366 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	ARFIP1	P53367	373 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	CLDN6	P56747	220 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	RRAS2	P62070	204 aa	Predicted RBP	7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	RPS26	P62854	115 aa	Known RBP	7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	TRA2B	P62995	288 aa	Known RBP	7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	ABAT	P80404	500 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	E2F1	Q01094	437 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	CD83	Q01151	205 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	MXD1	Q05195	221 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	TMEM44	Q2T9K0	475 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	COL28A1	Q2UY09	1125 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	PYDC2	Q56P42	97 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	PRRT3	Q5FWE3	981 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	PDZK1	Q5T2W1	519 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	AADACL4	Q5VUY2	407 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	PRAMEF8	Q5VWM4	474 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	PRAMEF13	Q5VWM6	474 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	PRAMEF7	Q5VXH5	474 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	SIGIRR	Q6IA17	410 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	MZT2B	Q6NZ67	158 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	TMEM64	Q6YI46	380 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	RASSF6	Q6ZTQ3	369 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	CREB3L2	Q70SY1	520 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	C6orf120	Q7Z4R8	191 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	UBE3D	Q7Z6J8	389 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	ABI3BP	Q7Z7G0	1075 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	PDZD3	Q86UT5	571 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	GLCCI1	Q86VQ1	547 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	SULF2	Q8IWU5	870 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	FAM109A	Q8N4B1	249 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	LMNTD1	Q8N9Z9	388 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	ATP6V1C2	Q8NEY4	427 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	OR52N1	Q8NH53	320 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	ENKUR	Q8TC29	256 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	GNPDA2	Q8TDQ7	276 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	NR4A3	Q92570	626 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	RNFT2	Q96EX2	444 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	SLC35G5	Q96KT7	338 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	LRR1	Q96L50	414 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	GPR137	Q96N19	417 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	ZNF607	Q96SK3	696 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	DPEP2	Q9H4A9	486 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	RPRD1B	Q9NQG5	326 aa	Known RBP	7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	UCKL1	Q9NWZ5	548 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	P2RX2	Q9UBL9	471 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	ADAM29	Q9UKF5	820 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	LIPT1	Q9Y234	373 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	CARD8	Q9Y2G2	431 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	CDH10	Q9Y6N8	788 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	RNF215	Q9Y6U7	377 aa		7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	TNRC6B	Q9UPQ9	1833 aa	Known RBP	7.27	□□□□□ -1.25
SPIDR-223	ENST00000524033	ASCC3	Q8N3C0	2202 aa	Known RBP	7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	ATM	Q13315	3056 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033		A0A087WV48	116 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	C7orf66	A4D0T2	115 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	POM121B	A6NF01	834 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	OR6C70	A6NIJ9	312 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033		H3BN98	237 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033		J3QRE1	110 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	GABRP	O00591	440 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	GNB5	O14775	395 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	SCAMP1	O15126	338 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	CASC3	O15234	703 aa	Known RBP	7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	TLX2	O43763	284 aa	Predicted RBP	7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	SLC28A2	O43868	658 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	TMPRSS11D	O60235	418 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	HPGDS	O60760	199 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	CSF2	P04141	144 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	CHRM4	P08173	479 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	PRKAR1A	P10644	381 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	ALPPL2	P10696	532 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	NID1	P14543	1247 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	ARSB	P15848	533 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	MYL12A	P19105	171 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	TNNI3	P19429	210 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	NME2	P22392	152 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	ACP1	P24666	158 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	PBLD	P30039	288 aa	Predicted RBP	7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	HTR2B	P41595	481 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	SLC1A3	P43003	542 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	KHK	P50053	298 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	RAB25	P57735	213 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	HNRNPK	P61978	463 aa	Known RBP eCLIP	7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	MEF2A	Q02078	507 aa	Predicted RBP	7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	BDH1	Q02338	343 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	TSPAN31	Q12999	210 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	COL9A2	Q14055	689 aa	Predicted RBP	7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	P2RY14	Q15391	338 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	SYPL1	Q16563	259 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	PLA1A	Q53H76	456 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	ZNF805	Q5CZA5	627 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	ZNF542P	Q5EBM4	170 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	HES3	Q5TGS1	186 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	KHDRBS2	Q5VWX1	349 aa	Known RBP	7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	KIAA1161	Q6NSJ0	714 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	PLET1	Q6UQ28	207 aa		7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	ZNF782	Q6ZMW2	699 aa	Predicted RBP	7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	PARS2	Q7L3T8	475 aa	Known RBP	7.26	□□□□□ -1.25
SPIDR-223	ENST00000524033	C11orf96	Q7Z7L8	435 aa		7.26	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms