RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 SHC1P29353 583 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 GDNFP39905 211 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 CSNK1EP49674 416 aaKnown RBP11.24□□□□□ -0.61
SPIDR-217ENST00000522117 ZNF140P52738 457 aaPredicted RBP11.24□□□□□ -0.61
SPIDR-217ENST00000522117 FAM69AQ5T7M9 428 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 KIAA1161Q6NSJ0 714 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 FAM111BQ6SJ93 734 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 GPBAR1Q8TDU6 330 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 RNFT2Q96EX2 444 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 C14orf79Q96F83 325 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 TEAD3Q99594 435 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 FAM83CQ9BQN1 747 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 SEC11CQ9BY50 192 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 TM6SF2Q9BZW4 377 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 CXCL16Q9H2A7 254 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 C1GALT1Q9NS00 363 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 WDR90Q96KV7 1748 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 IGKV6D-21A0A0A0MT36 114 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 A0A0G2JK05 382 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 SNRPGP15A8MWD9 76 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 H3BN98 237 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 RAB3DO95716 219 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 THEGLP0DJG4 465 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 ACP2P11117 423 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 NDUFV2P19404 249 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 DDTP30046 118 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 CCR7P32248 378 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 CDH4P55283 916 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 DLX5P56178 289 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 IL2P60568 153 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 CXADRP78310 365 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 GINS1Q14691 196 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 ELFN2Q5R3F8 820 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 DCAF12L2Q5VW00 463 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 MBOAT1Q6ZNC8 495 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 LHFPL3Q86UP9 236 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 OR52B4Q8NGK2 314 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 CD200R1Q8TD46 325 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 HMGB4Q8WW32 186 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 OSTF1Q92882 214 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 ADAD1Q96M93 576 aaKnown RBP11.24□□□□□ -0.61
SPIDR-217ENST00000522117 FDXACB1Q9BRP7 624 aaPredicted RBP11.24□□□□□ -0.61
SPIDR-217ENST00000522117 LINC00597Q9H2U6 94 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 NOX3Q9HBY0 568 aa11.24□□□□□ -0.61
SPIDR-217ENST00000522117 EXOSC1Q9Y3B2 195 aaKnown RBP11.24□□□□□ -0.61
SPIDR-217ENST00000522117 RALGAPA2Q2PPJ7 1873 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 MARCH11A6NNE9 402 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 YJEFN3A6XGL0 299 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 IL5P05113 134 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 SLC26A5P58743 744 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 DAOAP59103 153 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 ITKQ08881 620 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 RAB40BQ12829 278 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 CLINT1Q14677 625 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 RGNQ15493 299 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 PTPRNQ16849 979 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 LBHQ53QV2 105 aaPredicted RBP11.23□□□□□ -0.61
SPIDR-217ENST00000522117 NCMAPQ5T1S8 102 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 SFXN4Q6P4A7 337 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 RABEPKQ7Z6M1 372 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 RTL3Q8N8U3 475 aaKnown RBP11.23□□□□□ -0.61
SPIDR-217ENST00000522117 CCDC54Q8NEL0 328 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 PXYLP1Q8TE99 480 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 ZNF75AQ96N20 296 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 CLCC1Q96S66 551 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 MESP1Q9BRJ9 268 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 TSPAN10Q9H1Z9 355 aaPredicted RBP11.23□□□□□ -0.61
SPIDR-217ENST00000522117 CHRDQ9H2X0 955 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 GFOD1Q9NXC2 390 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 WASF3Q9UPY6 502 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 RCE1Q9Y256 329 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 ENPP4Q9Y6X5 453 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 IFITM10A6NMD0 228 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 FFAR1O14842 300 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 HYAL3O43820 417 aaPredicted RBP11.23□□□□□ -0.61
SPIDR-217ENST00000522117 KHDRBS3O75525 346 aaKnown RBP11.23□□□□□ -0.61
SPIDR-217ENST00000522117 C6orf47O95873 294 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 ZNF14P17017 642 aaPredicted RBP11.23□□□□□ -0.61
SPIDR-217ENST00000522117 HTR2AP28223 471 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 OPRD1P41143 372 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 GDF5P43026 501 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 EFNB1P98172 346 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 C17orf67Q0P5P2 114 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 RBM39Q14498 530 aaKnown RBP11.23□□□□□ -0.61
SPIDR-217ENST00000522117 TTLL4Q14679 1199 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 CSRP2Q16527 193 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 ZNF805Q5CZA5 627 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 LIPNQ5VXI9 398 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 FJX1Q86VR8 437 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 TTC16Q8NEE8 873 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 OR6X1Q8NH79 312 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 GINS4Q9BRT9 223 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 UTP23Q9BRU9 249 aaKnown RBP11.23□□□□□ -0.61
SPIDR-217ENST00000522117 TRMT61BQ9BVS5 477 aaKnown RBP11.23□□□□□ -0.61
SPIDR-217ENST00000522117 WDCPQ9H6R7 721 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 NT5MQ9NPB1 228 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 SMCO4Q9NRQ5 59 aa11.23□□□□□ -0.61
SPIDR-217ENST00000522117 HSBP1L1C9JCN9 74 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 F5H5P2 479 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 EFCAB14O75071 495 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms