RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 ZNF704Q6ZNC4 412 aaPredicted RBP6.59□□□□□ -1.35
CTNNA1-227ENST00000521387 KRTAP19-1Q8IUB9 90 aa6.59□□□□□ -1.35
CTNNA1-227ENST00000521387 LAS2Q8IYD9 372 aa6.59□□□□□ -1.35
CTNNA1-227ENST00000521387 CLECL1Q8IZS7 167 aa6.59□□□□□ -1.35
CTNNA1-227ENST00000521387 C9orf106Q8NAJ2 232 aa6.59□□□□□ -1.35
CTNNA1-227ENST00000521387 PSD4Q8NDX1 1056 aa6.59□□□□□ -1.35
CTNNA1-227ENST00000521387 ZNF740Q8NDX6 193 aa6.59□□□□□ -1.35
CTNNA1-227ENST00000521387 NUP43Q8NFH3 380 aa6.59□□□□□ -1.35
CTNNA1-227ENST00000521387 OR52E4Q8NGH9 312 aa6.59□□□□□ -1.35
CTNNA1-227ENST00000521387 LILRB1Q8NHL6 650 aaPredicted RBP6.59□□□□□ -1.35
CTNNA1-227ENST00000521387 CDC26Q8NHZ8 85 aa6.59□□□□□ -1.35
CTNNA1-227ENST00000521387 FAM216AQ8WUB2 273 aa6.59□□□□□ -1.35
CTNNA1-227ENST00000521387 TMBIM1Q969X1 311 aa6.59□□□□□ -1.35
CTNNA1-227ENST00000521387 FAM162AQ96A26 154 aa6.59□□□□□ -1.35
CTNNA1-227ENST00000521387 ANKRD9Q96BM1 317 aaPredicted RBP6.59□□□□□ -1.35
CTNNA1-227ENST00000521387 NTNG2Q96CW9 530 aa6.59□□□□□ -1.35
CTNNA1-227ENST00000521387 COQ8BQ96D53 544 aa6.59□□□□□ -1.35
CTNNA1-227ENST00000521387 MVB12AQ96EY5 273 aa6.59□□□□□ -1.35
CTNNA1-227ENST00000521387 SLC47A1Q96FL8 570 aa6.59□□□□□ -1.35
CTNNA1-227ENST00000521387 METTL2AQ96IZ6 378 aaKnown RBP6.59□□□□□ -1.35
CTNNA1-227ENST00000521387 PRPF18Q99633 342 aaKnown RBP6.59□□□□□ -1.35
CTNNA1-227ENST00000521387 UGT2B28Q9BY64 529 aa6.59□□□□□ -1.35
CTNNA1-227ENST00000521387 MRPS26Q9BYN8 205 aaKnown RBP6.59□□□□□ -1.35
CTNNA1-227ENST00000521387 DCAF13Q9NV06 445 aaKnown RBP6.59□□□□□ -1.35
CTNNA1-227ENST00000521387 KCMF1Q9P0J7 381 aa6.59□□□□□ -1.35
CTNNA1-227ENST00000521387 C19orf25Q9UFG5 118 aaPredicted RBP6.59□□□□□ -1.35
CTNNA1-227ENST00000521387 KCNS2Q9ULS6 477 aa6.59□□□□□ -1.35
CTNNA1-227ENST00000521387 CDC14AQ9UNH5 594 aa6.59□□□□□ -1.35
CTNNA1-227ENST00000521387 MAGED1Q9Y5V3 778 aaPredicted RBP6.59□□□□□ -1.35
CTNNA1-227ENST00000521387 KCNE2Q9Y6J6 123 aa6.59□□□□□ -1.35
CTNNA1-227ENST00000521387 MBD3L3A6NE82 208 aaPredicted RBP6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 ELOA3DA6NLF2 546 aaPredicted RBP6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 H0YGG7 62 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 LINC01387J3KSC0 135 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 CLIC1O00299 241 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 FOXE1O00358 373 aaPredicted RBP6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 EI24O14681 340 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 SCAMP2O15127 329 aaKnown RBP6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 PCDH7O60245 1069 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 KIAA0513O60268 411 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 DEAF1O75398 565 aaPredicted RBP6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 OR6B1O95007 311 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 TNFAIP8O95379 198 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 SNAP29O95721 258 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 SERPINA1P01009 418 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 TGFB1P01137 390 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 GNAO1P09471 354 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 ANXA4P09525 319 aaPredicted RBP6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 PABPC4LP0CB38 370 aaKnown RBP6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 ARAFP10398 606 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 ZNF23P17027 643 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 GPX2P18283 190 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 MYF6P23409 242 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 TIA1P31483 386 aaKnown RBP eCLIP6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 CAPGP40121 348 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 RPL5P46777 297 aaKnown RBP6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 ARF3P61204 181 aaPredicted RBP6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 MERTKQ12866 999 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 RPA4Q13156 261 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 LAPTM5Q13571 262 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 HIST2H2ACQ16777 129 aaPredicted RBP6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 DPY19L1Q2PZI1 675 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 HKDC1Q2TB90 917 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 CR1LQ2VPA4 569 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 CNPY1Q3B7I2 92 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 ELOA3BQ3SY89 546 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 SLC36A3Q495N2 470 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 MINDY4Q4G0A6 757 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 NDUFAF5Q5TEU4 345 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 HIST2H2AA3Q6FI13 130 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 ZNF621Q6ZSS3 439 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 RNF44Q7L0R7 432 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 ZNF550Q7Z398 422 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 VN1R5Q7Z5H4 357 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 TMEM179BQ7Z7N9 219 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 SATL1Q86VE3 508 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 PTOV1Q86YD1 416 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 DHRSXQ8N5I4 330 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 METTL25Q8N6Q8 603 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 ELOA3Q8NG57 546 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 OR8J2Q8NGG1 315 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 MBD3L2Q8NHZ7 208 aaPredicted RBP6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 MAGEE2Q8TD90 523 aaPredicted RBP6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 C16orf78Q8WTQ4 265 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 CYGBQ8WWM9 190 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 SLC5A11Q8WWX8 675 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 TSLPQ969D9 159 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 RAD51AP1Q96B01 352 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 MSI2Q96DH6 328 aaKnown RBP6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 TRMT61AQ96FX7 289 aaKnown RBP6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 REXO5Q96IC2 774 aaKnown RBP6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 QRFPRQ96P65 431 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 LPAR4Q99677 370 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 RHNO1Q9BSD3 238 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 TMEM204Q9BSN7 226 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 EFCAB11Q9BUY7 163 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 DUSP26Q9BV47 211 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 ADI1Q9BV57 179 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 ANKRD60Q9BZ19 345 aa6.58□□□□□ -1.36
CTNNA1-227ENST00000521387 OR51B5Q9H339 312 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms