RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 EXOC1LA0A1B0GW35 172 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 FEZF1A0PJY2 475 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 EIF4E1BA6NMX2 242 aaKnown RBP6.35□□□□□ -1.39
SDCBP-208ENST00000520228 SYCE1LA8MT33 242 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 RIPK2O43353 540 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 OR1F1O43749 312 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 KERAO60938 352 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 STK16O75716 305 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 KLF7O75840 302 aaPredicted RBP6.35□□□□□ -1.39
SDCBP-208ENST00000520228 PMS2P2O95744 297 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 STATHP02808 62 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 SNRPAP09012 282 aaKnown RBP6.35□□□□□ -1.39
SDCBP-208ENST00000520228 DAOP14920 347 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 GNAZP19086 355 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 APOBEC1P41238 236 aaKnown RBP6.35□□□□□ -1.39
SDCBP-208ENST00000520228 OR1D4P47884 311 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 SLC6A12P48065 614 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 SERPINB8P50452 374 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 NDUFA9Q16795 377 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 HKDC1Q2TB90 917 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 C18orf21Q32NC0 220 aaPredicted RBP6.35□□□□□ -1.39
SDCBP-208ENST00000520228 LINC00303Q3SY05 128 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 FAM122CQ6P4D5 195 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 KLC3Q6P597 504 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 C16orf82Q7Z2V1 217 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 ISCA2Q86U28 154 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 KLHDC8AQ8IYD2 350 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 CENPLQ8N0S6 344 aaPredicted RBP6.35□□□□□ -1.39
SDCBP-208ENST00000520228 METTL27Q8N6F8 245 aaPredicted RBP6.35□□□□□ -1.39
SDCBP-208ENST00000520228 RBMXL3Q8N7X1 1067 aaKnown RBP6.35□□□□□ -1.39
SDCBP-208ENST00000520228 MFSD9Q8NBP5 474 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 OR4K1Q8NGD4 311 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 LILRB1Q8NHL6 650 aaPredicted RBP6.35□□□□□ -1.39
SDCBP-208ENST00000520228 TRPC4APQ8TEL6 797 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 DCAKDQ8WVC6 231 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 KCTD4Q8WVF5 259 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.35□□□□□ -1.39
SDCBP-208ENST00000520228 SLC13A3Q8WWT9 602 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 SLC5A11Q8WWX8 675 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.35□□□□□ -1.39
SDCBP-208ENST00000520228 EXT2Q93063 718 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 TAAR8Q969N4 342 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 NXNL1Q96CM4 212 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 ORAI1Q96D31 301 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 C10orf90Q96M02 699 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 OR1F2PQ96R84 312 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 CCDC77Q9BR77 488 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 CAPS2Q9BXY5 557 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 TXLNGYQ9BZA5 131 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 DNAJC11Q9NVH1 559 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 WWOXQ9NZC7 414 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 ZNF224Q9NZL3 707 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 COPG2Q9UBF2 871 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 FBXL17Q9UF56 701 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 OR14J1Q9UGF5 321 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 PTBP2Q9UKA9 531 aaKnown RBP6.35□□□□□ -1.39
SDCBP-208ENST00000520228 PTRH2Q9Y3E5 179 aaKnown RBP6.35□□□□□ -1.39
SDCBP-208ENST00000520228 PIEZO2Q9H5I5 2752 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 TRBC2A0A5B9 178 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 SUPT3HB4E1H0 165 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 TRIM49D1C9J1S8 452 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 UBXN8O00124 270 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 TAPBPO15533 448 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 P2RX6O15547 441 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 SPINT2O43291 252 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 LCMT2O60294 686 aaKnown RBP6.34□□□□□ -1.39
SDCBP-208ENST00000520228 SUPT3HO75486 399 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 KLHL2O95198 593 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 SLU7O95391 586 aaKnown RBP6.34□□□□□ -1.39
SDCBP-208ENST00000520228 SERPIND1P05546 499 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 C1GALT1C1LP0DN25 315 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 SFTPCP11686 197 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 TMEM11P17152 192 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 CXCR2P25025 360 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 OTX2P32243 289 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 CSRP3P50461 194 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 ART1P52961 327 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 ACSM2AQ08AH3 577 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 CDC16Q13042 620 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 LY6DQ14210 128 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 RBBP5Q15291 538 aaKnown RBP6.34□□□□□ -1.39
SDCBP-208ENST00000520228 PDK4Q16654 411 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 PNLIPRP3Q17RR3 467 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 ZNF585BQ52M93 769 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 FBXO48Q5FWF7 155 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 DCST1Q5T197 706 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 ACSM2BQ68CK6 577 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 ZNF324BQ6AW86 544 aaPredicted RBP6.34□□□□□ -1.39
SDCBP-208ENST00000520228 CFAP161Q6P656 301 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 COX15Q7KZN9 410 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 VN1R4Q7Z5H5 301 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 TMPRSS11BQ86T26 416 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 ASPGQ86U10 573 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 SNX31Q8N9S9 440 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 CAMKVQ8NCB2 501 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 ZNF740Q8NDX6 193 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 OR2Y1Q8NGV0 311 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 RHEBL1Q8TAI7 183 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 ESAMQ96AP7 390 aa6.34□□□□□ -1.39
SDCBP-208ENST00000520228 TM4SF19Q96DZ7 209 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms