RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 PINK1Q9BXM7 581 aa16.82■□□□□ 0.28
FAM49B-208ENST00000518344 TPT1P8Q9HAU6 139 aa16.82■□□□□ 0.28
FAM49B-208ENST00000518344 PCNX1Q96RV3 2341 aa16.82■□□□□ 0.28
FAM49B-208ENST00000518344 NUP214P35658 2090 aaPredicted RBP16.82■□□□□ 0.28
FAM49B-208ENST00000518344 A0A0G2JND7 137 aa16.81■□□□□ 0.28
FAM49B-208ENST00000518344 C7orf72A4D263 438 aa16.81■□□□□ 0.28
FAM49B-208ENST00000518344 UBTFL6P0CB48 400 aaPredicted RBP16.81■□□□□ 0.28
FAM49B-208ENST00000518344 ETFAP13804 333 aa16.81■□□□□ 0.28
FAM49B-208ENST00000518344 ME2P23368 584 aa16.81■□□□□ 0.28
FAM49B-208ENST00000518344 PSMA4P25789 261 aaKnown RBP16.81■□□□□ 0.28
FAM49B-208ENST00000518344 EIF1P41567 113 aaKnown RBP16.81■□□□□ 0.28
FAM49B-208ENST00000518344 EIF1AXP47813 144 aaKnown RBP16.81■□□□□ 0.28
FAM49B-208ENST00000518344 FOXF1Q12946 379 aa16.81■□□□□ 0.28
FAM49B-208ENST00000518344 CBFBQ13951 182 aa16.81■□□□□ 0.28
FAM49B-208ENST00000518344 SQLEQ14534 574 aa16.81■□□□□ 0.28
FAM49B-208ENST00000518344 POMZP3Q6PJE2 187 aa16.81■□□□□ 0.28
FAM49B-208ENST00000518344 GGNQ86UU5 652 aa16.81■□□□□ 0.28
FAM49B-208ENST00000518344 OR5W2Q8NH69 310 aa16.81■□□□□ 0.28
FAM49B-208ENST00000518344 FBXO27Q8NI29 283 aa16.81■□□□□ 0.28
FAM49B-208ENST00000518344 FIG4Q92562 907 aa16.81■□□□□ 0.28
FAM49B-208ENST00000518344 THUMPD3Q9BV44 507 aaKnown RBP16.81■□□□□ 0.28
FAM49B-208ENST00000518344 LAT2Q9GZY6 243 aa16.81■□□□□ 0.28
FAM49B-208ENST00000518344 SAP130Q9H0E3 1048 aa16.81■□□□□ 0.28
FAM49B-208ENST00000518344 QRSL1Q9H0R6 528 aaKnown RBP16.81■□□□□ 0.28
FAM49B-208ENST00000518344 L3MBTL1Q9Y468 752 aa16.81■□□□□ 0.28
FAM49B-208ENST00000518344 EEF1E1-BLOC1S5C9J1V9 151 aa16.8■□□□□ 0.28
FAM49B-208ENST00000518344 EEF1E1O43324 174 aaKnown RBP16.8■□□□□ 0.28
FAM49B-208ENST00000518344 IL18BPO95998 194 aa16.8■□□□□ 0.28
FAM49B-208ENST00000518344 CHRM4P08173 479 aa16.8■□□□□ 0.28
FAM49B-208ENST00000518344 ASCL1P50553 236 aa16.8■□□□□ 0.28
FAM49B-208ENST00000518344 ATP4BP51164 291 aa16.8■□□□□ 0.28
FAM49B-208ENST00000518344 RAC1P63000 192 aa16.8■□□□□ 0.28
FAM49B-208ENST00000518344 SKP2Q13309 424 aa16.8■□□□□ 0.28
FAM49B-208ENST00000518344 FGFBP1Q14512 234 aa16.8■□□□□ 0.28
FAM49B-208ENST00000518344 PON3Q15166 354 aa16.8■□□□□ 0.28
FAM49B-208ENST00000518344 LRRC74BQ6ZQY2 392 aa16.8■□□□□ 0.28
FAM49B-208ENST00000518344 DMRTC2Q8IXT2 367 aaPredicted RBP16.8■□□□□ 0.28
FAM49B-208ENST00000518344 LILRA2Q8N149 483 aa16.8■□□□□ 0.28
FAM49B-208ENST00000518344 METTL25Q8N6Q8 603 aa16.8■□□□□ 0.28
FAM49B-208ENST00000518344 ARSGQ96EG1 525 aa16.8■□□□□ 0.28
FAM49B-208ENST00000518344 LRRC46Q96FV0 321 aa16.8■□□□□ 0.28
FAM49B-208ENST00000518344 ZFP3Q96NJ6 502 aa16.8■□□□□ 0.28
FAM49B-208ENST00000518344 PRRG4Q9BZD6 226 aa16.8■□□□□ 0.28
FAM49B-208ENST00000518344 PAIP1Q9H074 479 aaKnown RBP16.8■□□□□ 0.28
FAM49B-208ENST00000518344 SLC38A1Q9H2H9 487 aa16.8■□□□□ 0.28
FAM49B-208ENST00000518344 MTHFD2LQ9H903 347 aaPredicted RBP16.8■□□□□ 0.28
FAM49B-208ENST00000518344 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.8■□□□□ 0.28
FAM49B-208ENST00000518344 TRIM33Q9UPN9 1127 aa16.8■□□□□ 0.28
FAM49B-208ENST00000518344 PCDHB14Q9Y5E9 798 aa16.8■□□□□ 0.28
FAM49B-208ENST00000518344 GPC6Q9Y625 555 aaPredicted RBP16.8■□□□□ 0.28
FAM49B-208ENST00000518344 CLIC1O00299 241 aa16.79■□□□□ 0.28
FAM49B-208ENST00000518344 SYT5O00445 386 aa16.79■□□□□ 0.28
FAM49B-208ENST00000518344 IL11P20809 199 aa16.79■□□□□ 0.28
FAM49B-208ENST00000518344 SFTPDP35247 375 aa16.79■□□□□ 0.28
FAM49B-208ENST00000518344 MVDP53602 400 aa16.79■□□□□ 0.28
FAM49B-208ENST00000518344 DLX5P56178 289 aa16.79■□□□□ 0.28
FAM49B-208ENST00000518344 DSTNP60981 165 aa16.79■□□□□ 0.28
FAM49B-208ENST00000518344 IRX1P78414 480 aaPredicted RBP16.79■□□□□ 0.28
FAM49B-208ENST00000518344 KCNJ10P78508 379 aa16.79■□□□□ 0.28
FAM49B-208ENST00000518344 SNTB1Q13884 538 aaKnown RBP16.79■□□□□ 0.28
FAM49B-208ENST00000518344 QPRTQ15274 297 aa16.79■□□□□ 0.28
FAM49B-208ENST00000518344 OR2A2Q6IF42 318 aa16.79■□□□□ 0.28
FAM49B-208ENST00000518344 GDF7Q7Z4P5 450 aa16.79■□□□□ 0.28
FAM49B-208ENST00000518344 ZNF295-AS1Q8N0V1 137 aa16.79■□□□□ 0.28
FAM49B-208ENST00000518344 ACBD4Q8NC06 268 aa16.79■□□□□ 0.28
FAM49B-208ENST00000518344 ATP6V1C2Q8NEY4 427 aa16.79■□□□□ 0.28
FAM49B-208ENST00000518344 OR2V1Q8NHB1 315 aa16.79■□□□□ 0.28
FAM49B-208ENST00000518344 FNDC9Q8TBE3 224 aa16.79■□□□□ 0.28
FAM49B-208ENST00000518344 OIT3Q8WWZ8 545 aa16.79■□□□□ 0.28
FAM49B-208ENST00000518344 SIKE1Q9BRV8 207 aa16.79■□□□□ 0.28
FAM49B-208ENST00000518344 SFXN3Q9BWM7 321 aa16.79■□□□□ 0.28
FAM49B-208ENST00000518344 TRIM8Q9BZR9 551 aa16.79■□□□□ 0.28
FAM49B-208ENST00000518344 RABEP2Q9H5N1 569 aa16.79■□□□□ 0.28
FAM49B-208ENST00000518344 P2RX2Q9UBL9 471 aa16.79■□□□□ 0.28
FAM49B-208ENST00000518344 SLC35A3Q9Y2D2 325 aa16.79■□□□□ 0.28
FAM49B-208ENST00000518344 MED12Q93074 2177 aa16.79■□□□□ 0.28
FAM49B-208ENST00000518344 A0A096LPI6 279 aa16.78■□□□□ 0.28
FAM49B-208ENST00000518344 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.78■□□□□ 0.28
FAM49B-208ENST00000518344 CLDN24A6NM45 220 aa16.78■□□□□ 0.28
FAM49B-208ENST00000518344 TNFSF11O14788 317 aa16.78■□□□□ 0.28
FAM49B-208ENST00000518344 CXCL13O43927 109 aa16.78■□□□□ 0.28
FAM49B-208ENST00000518344 VIMP08670 466 aaKnown RBP16.78■□□□□ 0.28
FAM49B-208ENST00000518344 CD1EP15812 388 aa16.78■□□□□ 0.28
FAM49B-208ENST00000518344 PRKCAP17252 672 aa16.78■□□□□ 0.28
FAM49B-208ENST00000518344 IGFBP2P18065 325 aa16.78■□□□□ 0.28
FAM49B-208ENST00000518344 CAPN3P20807 821 aa16.78■□□□□ 0.28
FAM49B-208ENST00000518344 ADH6P28332 368 aa16.78■□□□□ 0.28
FAM49B-208ENST00000518344 RYKP34925 604 aa16.78■□□□□ 0.28
FAM49B-208ENST00000518344 PGM1P36871 562 aa16.78■□□□□ 0.28
FAM49B-208ENST00000518344 MAGEA8P43361 318 aa16.78■□□□□ 0.28
FAM49B-208ENST00000518344 SF3A3Q12874 501 aaKnown RBP eCLIP16.78■□□□□ 0.28
FAM49B-208ENST00000518344 PAGE3Q5JUK9 113 aa16.78■□□□□ 0.28
FAM49B-208ENST00000518344 PDSS1Q5T2R2 415 aa16.78■□□□□ 0.28
FAM49B-208ENST00000518344 AP1ARQ63HQ0 302 aa16.78■□□□□ 0.28
FAM49B-208ENST00000518344 ESPNLQ6ZVH7 1005 aa16.78■□□□□ 0.28
FAM49B-208ENST00000518344 LUZP2Q86TE4 346 aa16.78■□□□□ 0.28
FAM49B-208ENST00000518344 CNEP1R1Q8N9A8 125 aa16.78■□□□□ 0.28
FAM49B-208ENST00000518344 OR10D3Q8NH80 312 aa16.78■□□□□ 0.28
FAM49B-208ENST00000518344 STON2Q8WXE9 905 aa16.78■□□□□ 0.28
FAM49B-208ENST00000518344 RNASE6Q93091 150 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms