RNA–Protein interactions for RNA: ENST00000517026.1

SCARNA21-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 139 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21-201ENST00000517026 SHOX2O60902 331 aaPredicted RBP13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 PGM3O95394 542 aa13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 NUDT14O95848 222 aa13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 ACTL6AO96019 429 aa13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 LDLRP01130 860 aa13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 DBIP07108 87 aaKnown RBP13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 HNRNPCL4P0DMR1 293 aa13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 ESRRAP11474 423 aaPredicted RBP13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 ACVR2AP27037 513 aa13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 GCKP35557 465 aa13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 ADH7P40394 386 aa13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 LHX2P50458 406 aa13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 ZNF41P51814 821 aaPredicted RBP13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 CDK6Q00534 326 aa13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 TMEM44Q2T9K0 475 aa13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 PLPPR5Q32ZL2 321 aa13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 GLYR1Q49A26 553 aaPredicted RBP13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 RTL6Q6ICC9 239 aa13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 AAGABQ6PD74 315 aa13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 PTOV1Q86YD1 416 aa13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 PEX5LQ8IYB4 626 aa13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 ULK2Q8IYT8 1036 aa13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 PCYOX1LQ8NBM8 494 aa13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 OR52P1PQ8NH57 321 aa13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 OR10A6Q8NH74 314 aa13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 POC1BQ8TC44 478 aa13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 CCDC120Q96HB5 630 aa13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 DMRTA2Q96SC8 542 aa13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 TP63Q9H3D4 680 aaPredicted RBP13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 PIF1Q9H611 641 aa13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 KAT8Q9H7Z6 458 aaKnown RBP13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 BCL2L10Q9HD36 194 aa13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 RLIMQ9NVW2 624 aa13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 MED12Q93074 2177 aa13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 DNAJC13O75165 2243 aa13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 CSMD1Q96PZ7 3565 aa13.18□□□□□ -0.3
SCARNA21-201ENST00000517026 FAM47E-STBD1D6RA91 191 aa13.18□□□□□ -0.3
SCARNA21-201ENST00000517026 E9PLN8 166 aa13.18□□□□□ -0.3
SCARNA21-201ENST00000517026 ZG16O60844 167 aa13.18□□□□□ -0.3
SCARNA21-201ENST00000517026 ADAM11O75078 769 aa13.18□□□□□ -0.3
SCARNA21-201ENST00000517026 FAM107AO95990 144 aa13.18□□□□□ -0.3
SCARNA21-201ENST00000517026 OPN1LWP04000 364 aa13.18□□□□□ -0.3
SCARNA21-201ENST00000517026 LINGO3P0C6S8 592 aa13.18□□□□□ -0.3
SCARNA21-201ENST00000517026 IL7RP16871 459 aa13.18□□□□□ -0.3
SCARNA21-201ENST00000517026 IL11P20809 199 aa13.18□□□□□ -0.3
SCARNA21-201ENST00000517026 CHMP24386 653 aa13.18□□□□□ -0.3
SCARNA21-201ENST00000517026 AQP1P29972 269 aa13.18□□□□□ -0.3
SCARNA21-201ENST00000517026 RYKP34925 604 aa13.18□□□□□ -0.3
SCARNA21-201ENST00000517026 GZMMP51124 257 aa13.18□□□□□ -0.3
SCARNA21-201ENST00000517026 SUMO3P55854 103 aaPredicted RBP13.18□□□□□ -0.3
SCARNA21-201ENST00000517026 ADORA2A-AS1P86434 159 aa13.18□□□□□ -0.3
SCARNA21-201ENST00000517026 FOXF1Q12946 379 aa13.18□□□□□ -0.3
SCARNA21-201ENST00000517026 SCARB2Q14108 478 aa13.18□□□□□ -0.3
SCARNA21-201ENST00000517026 GNA13Q14344 377 aa13.18□□□□□ -0.3
SCARNA21-201ENST00000517026 CYP51A1Q16850 503 aa13.18□□□□□ -0.3
SCARNA21-201ENST00000517026 MRPL2Q5T653 305 aaKnown RBP13.18□□□□□ -0.3
SCARNA21-201ENST00000517026 REEP3Q6NUK4 255 aa13.18□□□□□ -0.3
SCARNA21-201ENST00000517026 CLIP4Q8N3C7 705 aa13.18□□□□□ -0.3
SCARNA21-201ENST00000517026 GTPBP8Q8N3Z3 284 aaPredicted RBP13.18□□□□□ -0.3
SCARNA21-201ENST00000517026 FAM71CQ8NEG0 241 aa13.18□□□□□ -0.3
SCARNA21-201ENST00000517026 TOR1AIP2Q8NFQ8 470 aa13.18□□□□□ -0.3
SCARNA21-201ENST00000517026 BBS10Q8TAM1 723 aa13.18□□□□□ -0.3
SCARNA21-201ENST00000517026 WDR60Q8WVS4 1066 aa13.18□□□□□ -0.3
SCARNA21-201ENST00000517026 OIT3Q8WWZ8 545 aa13.18□□□□□ -0.3
SCARNA21-201ENST00000517026 SMPDL3BQ92485 455 aa13.18□□□□□ -0.3
SCARNA21-201ENST00000517026 PMM1Q92871 262 aa13.18□□□□□ -0.3
SCARNA21-201ENST00000517026 RNF145Q96MT1 663 aa13.18□□□□□ -0.3
SCARNA21-201ENST00000517026 VKORC1Q9BQB6 163 aa13.18□□□□□ -0.3
SCARNA21-201ENST00000517026 PIGQQ9BRB3 760 aa13.18□□□□□ -0.3
SCARNA21-201ENST00000517026 RSPO3Q9BXY4 272 aaPredicted RBP13.18□□□□□ -0.3
SCARNA21-201ENST00000517026 PRDM14Q9GZV8 571 aa13.18□□□□□ -0.3
SCARNA21-201ENST00000517026 TMEM38AQ9H6F2 299 aa13.18□□□□□ -0.3
SCARNA21-201ENST00000517026 GID8Q9NWU2 228 aa13.18□□□□□ -0.3
SCARNA21-201ENST00000517026 ZNF443Q9Y2A4 671 aaPredicted RBP13.18□□□□□ -0.3
SCARNA21-201ENST00000517026 SLC35A3Q9Y2D2 325 aa13.18□□□□□ -0.3
SCARNA21-201ENST00000517026 FAM215AQ9Y5M1 114 aa13.18□□□□□ -0.3
SCARNA21-201ENST00000517026 FIGNL2A6NMB9 653 aa13.17□□□□□ -0.3
SCARNA21-201ENST00000517026 H0YC42 278 aa13.17□□□□□ -0.3
SCARNA21-201ENST00000517026 H3BML4 177 aa13.17□□□□□ -0.3
SCARNA21-201ENST00000517026 NPPAP01160 153 aa13.17□□□□□ -0.3
SCARNA21-201ENST00000517026 NID1P14543 1247 aa13.17□□□□□ -0.3
SCARNA21-201ENST00000517026 CPN1P15169 458 aa13.17□□□□□ -0.3
SCARNA21-201ENST00000517026 POU3F2P20265 443 aaPredicted RBP13.17□□□□□ -0.3
SCARNA21-201ENST00000517026 SLC6A2P23975 617 aa13.17□□□□□ -0.3
SCARNA21-201ENST00000517026 PSMA4P25789 261 aaKnown RBP13.17□□□□□ -0.3
SCARNA21-201ENST00000517026 TPD52P55327 224 aaPredicted RBP13.17□□□□□ -0.3
SCARNA21-201ENST00000517026 CLDN15P56746 228 aa13.17□□□□□ -0.3
SCARNA21-201ENST00000517026 CLDN18P56856 261 aa13.17□□□□□ -0.3
SCARNA21-201ENST00000517026 PMPCAQ10713 525 aa13.17□□□□□ -0.3
SCARNA21-201ENST00000517026 CBFBQ13951 182 aa13.17□□□□□ -0.3
SCARNA21-201ENST00000517026 QPRTQ15274 297 aa13.17□□□□□ -0.3
SCARNA21-201ENST00000517026 ACSF3Q4G176 576 aaPredicted RBP13.17□□□□□ -0.3
SCARNA21-201ENST00000517026 C1orf185Q5T7R7 199 aa13.17□□□□□ -0.3
SCARNA21-201ENST00000517026 PRAMEF8Q5VWM4 474 aa13.17□□□□□ -0.3
SCARNA21-201ENST00000517026 PRAMEF7Q5VXH5 474 aa13.17□□□□□ -0.3
SCARNA21-201ENST00000517026 ENPP6Q6UWR7 440 aa13.17□□□□□ -0.3
SCARNA21-201ENST00000517026 PLXDC2Q6UX71 529 aa13.17□□□□□ -0.3
SCARNA21-201ENST00000517026 ZNF836Q6ZNA1 936 aa13.17□□□□□ -0.3
SCARNA21-201ENST00000517026 NET1Q7Z628 596 aaPredicted RBP13.17□□□□□ -0.3
SCARNA21-201ENST00000517026 LSRQ86X29 649 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms