RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 PEPDP12955 493 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 EDN3P14138 238 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 HOXB6P17509 224 aaKnown RBP4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 CCNA2P20248 432 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 POU3F2P20265 443 aaPredicted RBP4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 PSMA4P25789 261 aaKnown RBP4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 GTF2E2P29084 291 aaKnown RBP4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 SLC7A1P30825 629 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 PTGS2P35354 604 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 MSX2P35548 267 aaPredicted RBP4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 APOBEC1P41238 236 aaKnown RBP4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 MAGEA5P43359 124 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 KCNJ5P48544 419 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 IDH2P48735 452 aaKnown RBP4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 POLR2HP52434 150 aaKnown RBP4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 MLLT10P55197 1068 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 SMIM11AP58511 58 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 TAS2R41P59536 307 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 RPS3AP61247 264 aaKnown RBP4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 SELENOWP63302 87 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 KCNC4Q03721 635 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 ZNF117Q03924 483 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 CHRNB3Q05901 458 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 FUT5Q11128 374 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 TRAP1Q12931 704 aaKnown RBP4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 FLOT2Q14254 428 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 QPRTQ15274 297 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 TAF11Q15544 211 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 CD226Q15762 336 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 SGCBQ16585 318 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 NDUFAF6Q330K2 333 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 ELOA3BQ3SY89 546 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 FAM98BQ52LJ0 330 aaKnown RBP4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 WIPI1Q5MNZ9 446 aaPredicted RBP4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 RNF220Q5VTB9 566 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 WBP2NLQ6ICG8 309 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 C8orf82Q6P1X6 216 aaPredicted RBP4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 C6orf89Q6UWU4 347 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 CYP2R1Q6VVX0 501 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 DEF8Q6ZN54 512 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 PLEKHM3Q6ZWE6 761 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 CCDC80Q76M96 950 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 ZNF771Q7L3S4 317 aaPredicted RBP4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 ZNF605Q86T29 641 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 YRDCQ86U90 279 aaKnown RBP4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 ZNF227Q86WZ6 799 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 CARM1Q86X55 608 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 SPPL2CQ8IUH8 684 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 GRAMD2AQ8IUY3 354 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 PM20D2Q8IYS1 436 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 ULK2Q8IYT8 1036 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 C10orf53Q8N6V4 93 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 WDSUB1Q8N9V3 476 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 FAM156AQ8NDB6 213 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 FAM83FQ8NEG4 500 aaPredicted RBP4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 ELOA3Q8NG57 546 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 OR2M3Q8NG83 312 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 FBXO27Q8NI29 283 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 DNAJA4Q8WW22 397 aaPredicted RBP4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 GEMIN6Q8WXD5 167 aaKnown RBP4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 SMPDL3BQ92485 455 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 NR4A3Q92570 626 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 CNOT9Q92600 299 aaKnown RBP4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 ABTB1Q969K4 478 aaPredicted RBP4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 SLC35B4Q969S0 331 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 DDIT4LQ96D03 193 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 ZG16BQ96DA0 208 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 SNRNP40Q96DI7 357 aaKnown RBP4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 ZHX1-C8orf76Q96EF9 292 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 C1GALT1C1Q96EU7 318 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 SLC47A1Q96FL8 570 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 GPR137Q96N19 417 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 FRMD6Q96NE9 622 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 MCHR1Q99705 422 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 PRRG4Q9BZD6 226 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 LRMDAQ9H2I8 198 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 GORASP2Q9H8Y8 452 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 SH2D2AQ9NP31 389 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 ACKR4Q9NPB9 350 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 KRCC1Q9NPI7 259 aaPredicted RBP4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 EXOSC3Q9NQT5 275 aaKnown RBP4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 DEPPQ9NTK1 212 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 MED17Q9NVC6 651 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 ASF1BQ9NVP2 202 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 C6orf203Q9P0P8 240 aaPredicted RBP4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 ACTR3BQ9P1U1 418 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 TESQ9UGI8 421 aaKnown RBP4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 CAMK2AQ9UQM7 478 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 MRPS18CQ9Y3D5 142 aaKnown RBP4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 V9GYQ6 96 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 DCHS1Q96JQ0 3298 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 DSPP15924 2871 aaKnown RBP4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 PCSK5Q92824 1860 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 DSPPQ9NZW4 1301 aa4.96□□□□□ -1.62
SCARNA16.4-201ENST00000516956 ITPR1Q14643 2758 aa4.95□□□□□ -1.62
SCARNA16.4-201ENST00000516956 MAP1BP46821 2468 aaKnown RBP4.95□□□□□ -1.62
SCARNA16.4-201ENST00000516956 PKD1L2Q7Z442 2459 aa4.95□□□□□ -1.62
SCARNA16.4-201ENST00000516956 IGLV3-32A0A0A0MS00 114 aa4.95□□□□□ -1.62
SCARNA16.4-201ENST00000516956 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.95□□□□□ -1.62
SCARNA16.4-201ENST00000516956 PRAMEF27A3QJZ7 478 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 311.4 ms