RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 GRM7Q14831 915 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 TSNQ15631 228 aaKnown RBP2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 ZIC1Q15915 447 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 HIST2H2ACQ16777 129 aaPredicted RBP2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 PHKG1Q16816 387 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 PRTGQ2VWP7 1150 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 CCDC153Q494R4 210 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 CCSMST1Q4G0I0 132 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 TMEM35AQ53FP2 167 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 PAGE2BQ5JRK9 111 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 NCMAPQ5T1S8 102 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 C1orf146Q5VVC0 180 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 LIPJQ5W064 366 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 HIST2H2AA3Q6FI13 130 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 FRA10AC1Q70Z53 315 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 RNF44Q7L0R7 432 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 LRRC70Q7Z2Q7 622 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 C17orf64Q86WR6 236 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 CARM1Q86X55 608 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 SLC22A9Q8IVM8 553 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 CENPLQ8N0S6 344 aaPredicted RBP2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 LILRA2Q8N149 483 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 KRT78Q8N1N4 520 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 ARHGAP24Q8N264 748 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 PQLC1Q8N2U9 271 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 TMEM151AQ8N4L1 468 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 DTWD1Q8N5C7 304 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 ZNF645Q8N7E2 425 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 POU5F2Q8N7G0 328 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 ZNF740Q8NDX6 193 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 SRFBP1Q8NEF9 429 aaKnown RBP2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 TRPV3Q8NET8 790 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 JADE3Q92613 823 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 STMN2Q93045 179 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 RERGQ96A58 199 aaPredicted RBP2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 INTS12Q96CB8 462 aaKnown RBP2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 DGCR14Q96DF8 476 aaKnown RBP2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 TM4SF19Q96DZ7 209 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 SENP5Q96HI0 755 aaPredicted RBP2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 ZFP3Q96NJ6 502 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 OR2A5Q96R48 311 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 SORT1Q99523 831 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 CCT7Q99832 543 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 DPH7Q9BTV6 452 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 THTPAQ9BU02 230 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 TRMOQ9BU70 441 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 EFCAB11Q9BUY7 163 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 MECRQ9BV79 373 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 CHIAQ9BZP6 476 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 CD244Q9BZW8 370 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 ROGDIQ9GZN7 287 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 SLC6A15Q9H2J7 730 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 MRPL46Q9H2W6 279 aaKnown RBP2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 RHBGQ9H310 441 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 XKR8Q9H6D3 395 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 CAB39LQ9H9S4 337 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 PELI2Q9HAT8 420 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 MRPS30Q9NP92 439 aaKnown RBP2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 MYOZ1Q9NP98 299 aaPredicted RBP2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 SNX15Q9NRS6 342 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 SPHK1Q9NYA1 384 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 FAM8A1Q9UBU6 413 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 RAB26Q9ULW5 256 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 CDC14AQ9UNH5 594 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 RUVBL2Q9Y230 463 aaKnown RBP2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 POMPQ9Y244 141 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 DTX4Q9Y2E6 619 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 PLLPQ9Y342 182 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 SH3GLB1Q9Y371 365 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 SLC22A7Q9Y694 548 aa2.75□□□□□ -1.97
SCARNA13-201ENST00000516672 TNXBP22105 4242 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 KIAA2026Q5HYC2 2103 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 IGKV1-8A0A0C4DH67 115 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 A0A0G2JMP0 313 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 A0A0X1KG70 313 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 SH3PXD2BA1X283 911 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 SERTM1A2A2V5 107 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 C7orf72A4D263 438 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 H0YGG7 62 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 H0YIG0 161 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 H0YIV9 168 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 H7BY64 318 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 J3QLI3 93 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 FOXE1O00358 373 aaPredicted RBP2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 PLOD2O00469 737 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 COPEO14579 308 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 TAPBPO15533 448 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 PHGDHO43175 533 aaKnown RBP2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 ITM2AO43736 263 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 RAMP1O60894 148 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 GLRA3O75311 464 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 CLEC3AO75596 197 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 LYPLA1O75608 230 aaPredicted RBP2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 TRMUO75648 421 aaKnown RBP2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 STAMBPO95630 424 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 BAG2O95816 211 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 GUCA1CO95843 209 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 OTCP00480 354 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 SLC35G6P0C7Q6 338 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 ZNF26P17031 533 aaPredicted RBP2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms