RNA–Protein interactions for RNA: ENST00000514705.5

TSPAN17-208, Transcript of tetraspanin 17, humanhuman

TSL 2

Gene TSPAN17, Length 4,445 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-208ENST00000514705 NUP50Q9UKX7 468 aa12.96□□□□□ -0.33
TSPAN17-208ENST00000514705 TDRD15B5MCY1 1934 aaKnown RBP12.96□□□□□ -0.33
TSPAN17-208ENST00000514705 MNDAP41218 407 aa12.96□□□□□ -0.33
TSPAN17-208ENST00000514705 VEGFCP49767 419 aa12.96□□□□□ -0.33
TSPAN17-208ENST00000514705 SLC7A9P82251 487 aa12.96□□□□□ -0.33
TSPAN17-208ENST00000514705 EXOSC2Q13868 293 aaKnown RBP12.96□□□□□ -0.33
TSPAN17-208ENST00000514705 PARGQ86W56 976 aa12.96□□□□□ -0.33
TSPAN17-208ENST00000514705 LRRC56Q8IYG6 542 aaPredicted RBP12.96□□□□□ -0.33
TSPAN17-208ENST00000514705 MS4A15Q8N5U1 240 aa12.96□□□□□ -0.33
TSPAN17-208ENST00000514705 THAP4Q8WY91 577 aa12.96□□□□□ -0.33
TSPAN17-208ENST00000514705 GCDHQ92947 438 aaPredicted RBP12.96□□□□□ -0.33
TSPAN17-208ENST00000514705 DNAJA3Q96EY1 480 aa12.96□□□□□ -0.33
TSPAN17-208ENST00000514705 FCRL1Q96LA6 429 aa12.96□□□□□ -0.33
TSPAN17-208ENST00000514705 HSPA12BQ96MM6 686 aa12.96□□□□□ -0.33
TSPAN17-208ENST00000514705 KCNE3Q9Y6H6 103 aa12.96□□□□□ -0.33
TSPAN17-208ENST00000514705 DOCK4Q8N1I0 1966 aa12.96□□□□□ -0.34
TSPAN17-208ENST00000514705 HYAL3O43820 417 aaPredicted RBP12.96□□□□□ -0.34
TSPAN17-208ENST00000514705 IFNA16P05015 189 aa12.96□□□□□ -0.34
TSPAN17-208ENST00000514705 HTR1FP30939 366 aa12.96□□□□□ -0.34
TSPAN17-208ENST00000514705 GDI1P31150 447 aa12.96□□□□□ -0.34
TSPAN17-208ENST00000514705 PXNP49023 591 aaPredicted RBP12.96□□□□□ -0.34
TSPAN17-208ENST00000514705 MTNR1BP49286 362 aa12.96□□□□□ -0.34
TSPAN17-208ENST00000514705 PRSS53Q2L4Q9 553 aa12.96□□□□□ -0.34
TSPAN17-208ENST00000514705 FAAH2Q6GMR7 532 aa12.96□□□□□ -0.34
TSPAN17-208ENST00000514705 LIN54Q6MZP7 749 aa12.96□□□□□ -0.34
TSPAN17-208ENST00000514705 TEX261Q6UWH6 196 aa12.96□□□□□ -0.34
TSPAN17-208ENST00000514705 OR13C2Q8NGS9 318 aa12.96□□□□□ -0.34
TSPAN17-208ENST00000514705 FLVCR2Q9UPI3 526 aa12.96□□□□□ -0.34
TSPAN17-208ENST00000514705 U3KQ87 197 aa12.96□□□□□ -0.34
TSPAN17-208ENST00000514705 F5P12259 2224 aa12.96□□□□□ -0.34
TSPAN17-208ENST00000514705 A0A0B4J293 547 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 A0A1W2PPL8 197 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 MMP12P39900 470 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 PER3P56645 1201 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 ZNHIT3Q15649 155 aaPredicted RBP12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 NRSN1Q8IZ57 195 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 OR8D4Q8NGM9 314 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 OR2L2Q8NH16 312 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 RNF31Q96EP0 1072 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 ZDHHC5Q9C0B5 715 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 FGF20Q9NP95 211 aaPredicted RBP12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 ASB6Q9NWX5 421 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 CHP2O43745 196 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 CREBL2O60519 120 aaPredicted RBP12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 ZNF10P21506 573 aaPredicted RBP12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 IRS1P35568 1242 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 GDNFP39905 211 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 METAP1P53582 386 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 BTG1P62324 171 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 GRK1Q15835 563 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 ZNF770Q6IQ21 691 aaPredicted RBP12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 ZC3H14Q6PJT7 736 aaKnown RBP12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 FAM198BQ6UWH4 519 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 C3P1Q6ZMU1 363 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 DPEP2Q9H4A9 486 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 KLHL31Q9H511 634 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 IL21Q9HBE4 155 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 KCND3Q9UK17 655 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 SERTM1A2A2V5 107 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 NPIPB8E9PQR5 432 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 SPTBP11277 2137 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 ADRB3P13945 408 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 LRRC37A5PQ49AS3 106 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 SLC16A11Q8NCK7 471 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 SDR9C7Q8NEX9 313 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 VN1R2Q8NFZ6 395 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 OR14C36Q8NHC7 312 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 ANGPTL6Q8NI99 470 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 SPPL3Q8TCT6 385 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 TMEM239Q8WW34 195 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 NR4A3Q92570 626 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 ACTRT3Q9BYD9 372 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 TRABD2BA6NFA1 517 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 LANCL1O43813 399 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 VEGFDO43915 354 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 LCMT2O60294 686 aaKnown RBP12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 RP2O75695 350 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 KRT33AO76009 404 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 AIFM1O95831 613 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 NUDT14O95848 222 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 HIST1H1TP22492 207 aaPredicted RBP12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 AK4P27144 223 aaPredicted RBP12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 TEAD1P28347 426 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 FGF9P31371 208 aaPredicted RBP12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 BSGP35613 385 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 GDI2P50395 445 aaKnown RBP12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 HCCSP53701 268 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 EEF1A2Q05639 463 aaKnown RBP12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 SLC25A35Q3KQZ1 300 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 TCTE1Q5JU00 501 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 GDF7Q7Z4P5 450 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 ANKRD53Q8N9V6 530 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 OR52N1Q8NH53 320 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 SLX1AQ9BQ83 275 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 SEC22CQ9BRL7 303 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 C1QTNF2Q9BXJ5 285 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 ZBP1Q9H171 429 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 EMC7Q9NPA0 242 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 SCP2D1Q9UJQ7 156 aa12.95□□□□□ -0.34
TSPAN17-208ENST00000514705 CEP350Q5VT06 3117 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms