RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 PTGS2P35354 604 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 KCNJ5P48544 419 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 MMP15P51511 669 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 NR0B2Q15466 257 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 ELFN2Q5R3F8 820 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 C6orf132Q5T0Z8 1188 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 ASCL5Q7RTU5 278 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 TSPAN33Q86UF1 283 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 LGI4Q8N135 537 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 OR7G3Q8NG95 312 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 OR11G2Q8NGC1 345 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 OR52N1Q8NH53 320 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 MOSPD2Q8NHP6 518 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 MAL2Q969L2 176 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 SGK3Q96BR1 496 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 MTERF3Q96E29 417 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 NEURL3Q96EH8 262 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 ARL5BQ96KC2 179 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 THUMPD3Q9BV44 507 aaKnown RBP6.88□□□□□ -1.31
CLIP1-205ENST00000514271 RAB11FIP5Q9BXF6 653 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 SEMA6CQ9H3T2 930 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 ASB8Q9H765 288 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 SLAMF7Q9NQ25 335 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 ICAM5Q9UMF0 924 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 TMEM5Q9Y2B1 443 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 CA5BQ9Y2D0 317 aa6.88□□□□□ -1.31
CLIP1-205ENST00000514271 YARS2Q9Y2Z4 477 aaKnown RBP6.88□□□□□ -1.31
CLIP1-205ENST00000514271 SIRT4Q9Y6E7 314 aaPredicted RBP6.88□□□□□ -1.31
CLIP1-205ENST00000514271 RANBP2P49792 3224 aaKnown RBP6.87□□□□□ -1.31
CLIP1-205ENST00000514271 PRR19A6NJB7 356 aa6.87□□□□□ -1.31
CLIP1-205ENST00000514271 SMLR1H3BR10 107 aa6.87□□□□□ -1.31
CLIP1-205ENST00000514271 TNFRSF11BO00300 401 aa6.87□□□□□ -1.31
CLIP1-205ENST00000514271 FABP7O15540 132 aa6.87□□□□□ -1.31
CLIP1-205ENST00000514271 SMPD2O60906 423 aa6.87□□□□□ -1.31
CLIP1-205ENST00000514271 SLC25A14O95258 325 aaPredicted RBP6.87□□□□□ -1.31
CLIP1-205ENST00000514271 WNT1P04628 370 aa6.87□□□□□ -1.31
CLIP1-205ENST00000514271 RBMS1P29558 406 aaKnown RBP6.87□□□□□ -1.31
CLIP1-205ENST00000514271 NUDT6P53370 316 aa6.87□□□□□ -1.31
CLIP1-205ENST00000514271 SLC26A5P58743 744 aa6.87□□□□□ -1.31
CLIP1-205ENST00000514271 RPS11P62280 158 aaKnown RBP eCLIP6.87□□□□□ -1.31
CLIP1-205ENST00000514271 SPEM2Q0P670 501 aa6.87□□□□□ -1.31
CLIP1-205ENST00000514271 SRSF5Q13243 272 aaKnown RBP6.87□□□□□ -1.31
CLIP1-205ENST00000514271 BTBD16Q32M84 506 aa6.87□□□□□ -1.31
CLIP1-205ENST00000514271 POM121L1PQ3SYA9 428 aa6.87□□□□□ -1.31
CLIP1-205ENST00000514271 PLEKHS1Q5SXH7 462 aa6.87□□□□□ -1.31
CLIP1-205ENST00000514271 ZNF648Q5T619 568 aaPredicted RBP6.87□□□□□ -1.31
CLIP1-205ENST00000514271 TMIGD1Q6UXZ0 262 aa6.87□□□□□ -1.31
CLIP1-205ENST00000514271 C17orf82Q86X59 251 aaPredicted RBP6.87□□□□□ -1.31
CLIP1-205ENST00000514271 ZBTB2Q8N680 514 aa6.87□□□□□ -1.31
CLIP1-205ENST00000514271 ZNF655Q8N720 491 aaPredicted RBP6.87□□□□□ -1.31
CLIP1-205ENST00000514271 SYT14Q8NB59 555 aa6.87□□□□□ -1.31
CLIP1-205ENST00000514271 GPR26Q8NDV2 337 aa6.87□□□□□ -1.31
CLIP1-205ENST00000514271 TTLQ8NG68 377 aa6.87□□□□□ -1.31
CLIP1-205ENST00000514271 GEMIN6Q8WXD5 167 aaKnown RBP6.87□□□□□ -1.31
CLIP1-205ENST00000514271 RGMAQ96B86 450 aa6.87□□□□□ -1.31
CLIP1-205ENST00000514271 SGPP1Q9BX95 441 aa6.87□□□□□ -1.31
CLIP1-205ENST00000514271 NTMQ9P121 344 aa6.87□□□□□ -1.31
CLIP1-205ENST00000514271 REV3LO60673 3130 aa6.87□□□□□ -1.31
CLIP1-205ENST00000514271 LNP1A1A4G5 178 aa6.87□□□□□ -1.31
CLIP1-205ENST00000514271 ANTXRLA6NF34 631 aa6.87□□□□□ -1.31
CLIP1-205ENST00000514271 CCDC182A6NF36 153 aa6.87□□□□□ -1.31
CLIP1-205ENST00000514271 MGAT4DA6NG13 374 aa6.87□□□□□ -1.31
CLIP1-205ENST00000514271 PDE9AO76083 593 aa6.87□□□□□ -1.31
CLIP1-205ENST00000514271 CEACAM5P06731 702 aa6.87□□□□□ -1.31
CLIP1-205ENST00000514271 NMBP08949 121 aa6.87□□□□□ -1.31
CLIP1-205ENST00000514271 ANKRD34CP0C6C1 535 aa6.87□□□□□ -1.31
CLIP1-205ENST00000514271 ATP1B2P14415 290 aaPredicted RBP6.87□□□□□ -1.31
CLIP1-205ENST00000514271 ELK1P19419 428 aa6.87□□□□□ -1.31
CLIP1-205ENST00000514271 MAT2AP31153 395 aaKnown RBP6.87□□□□□ -1.31
CLIP1-205ENST00000514271 WNT4P56705 351 aa6.87□□□□□ -1.31
CLIP1-205ENST00000514271 FOXK2Q01167 660 aa6.87□□□□□ -1.31
CLIP1-205ENST00000514271 ALG11Q2TAA5 492 aa6.87□□□□□ -1.31
CLIP1-205ENST00000514271 ENPP7Q6UWV6 458 aa6.87□□□□□ -1.31
CLIP1-205ENST00000514271 UNQ9370/PRO34162Q6UXP9 181 aa6.87□□□□□ -1.31
CLIP1-205ENST00000514271 ZNF704Q6ZNC4 412 aaPredicted RBP6.87□□□□□ -1.31
CLIP1-205ENST00000514271 FAM92BQ6ZTR7 304 aa6.87□□□□□ -1.31
CLIP1-205ENST00000514271 NAXDQ8IW45 347 aa6.87□□□□□ -1.31
CLIP1-205ENST00000514271 FAM71CQ8NEG0 241 aa6.87□□□□□ -1.31
CLIP1-205ENST00000514271 OR2L2Q8NH16 312 aa6.87□□□□□ -1.31
CLIP1-205ENST00000514271 AKAP1Q92667 903 aaKnown RBP eCLIP6.87□□□□□ -1.31
CLIP1-205ENST00000514271 KCTD12Q96CX2 325 aaKnown RBP6.87□□□□□ -1.31
CLIP1-205ENST00000514271 SECISBP2Q96T21 854 aaKnown RBP6.87□□□□□ -1.31
CLIP1-205ENST00000514271 AICDAQ9GZX7 198 aa6.87□□□□□ -1.31
CLIP1-205ENST00000514271 RPRD1BQ9NQG5 326 aaKnown RBP6.87□□□□□ -1.31
CLIP1-205ENST00000514271 MBNL1Q9NR56 388 aaKnown RBP6.87□□□□□ -1.31
CLIP1-205ENST00000514271 POT1Q9NUX5 634 aa6.87□□□□□ -1.31
CLIP1-205ENST00000514271 VPS4AQ9UN37 437 aa6.87□□□□□ -1.31
CLIP1-205ENST00000514271 CIB4A0PJX0 185 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 LILRA5A6NI73 299 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 GPR171O14626 319 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 WDPCPO95876 746 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 CXCL2P19875 107 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 NOS3P29474 1203 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 S100A3P33764 101 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 SDC2P34741 201 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 KIR3DL1P43629 444 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 OMPP47874 163 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 AP1S2P56377 157 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 SIM1P81133 766 aaPredicted RBP6.86□□□□□ -1.31
CLIP1-205ENST00000514271 TMEM115Q12893 351 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms