RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 PITPNAQ00169 270 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 PRSS53Q2L4Q9 553 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 LRRC37A5PQ49AS3 106 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 LCTLQ6UWM7 567 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 TMEM107Q6UX40 140 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 ZNF547Q8IVP9 402 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 LINC00615Q96LM1 132 aaPredicted RBP8.99□□□□□ -0.97
VCAN-210ENST00000513960 LRRC3BQ96PB8 259 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 NDC1Q9BTX1 674 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 IFT27Q9BW83 186 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 MED11Q9P086 117 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 DPP7Q9UHL4 492 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 ACSL5Q9ULC5 683 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 A0A087WUU8 490 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 C1QTNF3-AMACRE9PGA6 284 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 TRIM77I1YAP6 450 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 DPTQ07507 201 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 Q6ZTK2 550 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 ERN2Q76MJ5 926 aaKnown RBP8.99□□□□□ -0.97
VCAN-210ENST00000513960 SLC9B2Q86UD5 537 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 PDZD9Q8IXQ8 264 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 TMEM99Q8N816 258 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 GNPDA2Q8TDQ7 276 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 SCMH1Q96GD3 660 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 MACROD1Q9BQ69 325 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 SPATA5L1Q9BVQ7 753 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 SLC25A18Q9H1K4 315 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 SLCO1C1Q9NYB5 712 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 CPNE7Q9UBL6 633 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 SF3B6Q9Y3B4 125 aaKnown RBP8.99□□□□□ -0.97
VCAN-210ENST00000513960 FKBP7Q9Y680 259 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 PLXNA2O75051 1894 aa8.99□□□□□ -0.97
VCAN-210ENST00000513960 A8MVJ9 347 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 SEMA7AO75326 666 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 PEX14O75381 377 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 LPLP06858 475 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 ACADLP28330 430 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 NTSP30990 170 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 STAT5AP42229 794 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 RAD52P43351 418 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 LIMS1P48059 325 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 GDI2P50395 445 aaKnown RBP8.98□□□□□ -0.97
VCAN-210ENST00000513960 NDUFAF6Q330K2 333 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 ZNF322Q6U7Q0 402 aaPredicted RBP8.98□□□□□ -0.97
VCAN-210ENST00000513960 SLC6A15Q9H2J7 730 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 GPN1Q9HCN4 374 aaPredicted RBP8.98□□□□□ -0.97
VCAN-210ENST00000513960 FZD3Q9NPG1 666 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 LYARQ9NX58 379 aaKnown RBP8.98□□□□□ -0.97
VCAN-210ENST00000513960 WSB2Q9NYS7 404 aaPredicted RBP8.98□□□□□ -0.97
VCAN-210ENST00000513960 CACNA1CQ13936 2221 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 HELZP42694 1942 aaKnown RBP8.98□□□□□ -0.97
VCAN-210ENST00000513960 ARPC4-TTLL3A0A0A6YYG9 625 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 A0A1B0GW55 424 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 PSMD9O00233 223 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 SPINT1O43278 529 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 SOX30O94993 753 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 PAPLNO95428 1278 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 DUX4L2P0CJ85 424 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 DUX4L3P0CJ86 424 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 DUX4L4P0CJ87 422 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 DUX4L5P0CJ88 424 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 DUX4L6P0CJ89 424 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 DUX4L7P0CJ90 424 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 TFPIP10646 304 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 HK1P19367 917 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 ZP3P21754 424 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 FGF9P31371 208 aaPredicted RBP8.98□□□□□ -0.97
VCAN-210ENST00000513960 AKR1C2P52895 323 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 PCBP3P57721 371 aaKnown RBP8.98□□□□□ -0.97
VCAN-210ENST00000513960 AKR1C1Q04828 323 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 ACSM3Q53FZ2 586 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 APOOLQ6UXV4 268 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 FAM83HQ6ZRV2 1179 aaPredicted RBP8.98□□□□□ -0.97
VCAN-210ENST00000513960 VRK2Q86Y07 508 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 CCDC116Q8IYX3 515 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 SIRT6Q8N6T7 355 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 OR4D9Q8NGE8 314 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 OR2T4Q8NH00 348 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 OR56B4Q8NH76 319 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 OR5P2Q8WZ92 322 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 PDXPQ96GD0 296 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 ZNF768Q9H5H4 540 aaKnown RBP8.98□□□□□ -0.97
VCAN-210ENST00000513960 CYSLTR2Q9NS75 346 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 CUEDC1Q9NWM3 386 aaPredicted RBP8.98□□□□□ -0.97
VCAN-210ENST00000513960 BABAM2Q9NXR7 383 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 DUX4Q9UBX2 424 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 TESQ9UGI8 421 aaKnown RBP8.98□□□□□ -0.97
VCAN-210ENST00000513960 PRKAG2Q9UGJ0 569 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 CDV3Q9UKY7 258 aaKnown RBP8.98□□□□□ -0.97
VCAN-210ENST00000513960 A4GNTQ9UNA3 340 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 PLCL2Q9UPR0 1127 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 LTBP2Q14767 1821 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 GNB5O14775 395 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 FLRT2O43155 660 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 OR1F1O43749 312 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 PCCBP05166 539 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 FUT1P19526 365 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 NFYAP23511 347 aaPredicted RBP8.98□□□□□ -0.97
VCAN-210ENST00000513960 MESP2Q0VG99 397 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 ZNF234Q14588 700 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms