RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 IGLV3-32A0A0A0MS00 114 aa8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 TRGV5A0A0B4J1U4 118 aa8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 A0A0G2JPF8 293 aa8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 HNRNPCL2B2RXH8 293 aa8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 HNRNPCL3B7ZW38 293 aa8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 NPIPA2E9PIF3 369 aa8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 NPIPA3F8WFD2 350 aa8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 H3BNH8 94 aa8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 ZNF264O43296 627 aa8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 HNRNPCL1O60812 293 aaKnown RBP8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 PDE5AO76074 875 aa8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 EPPINO95925 133 aa8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 F12P00748 615 aaPredicted RBP8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 HPNP05981 417 aa8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 PABPC4LP0CB38 370 aaKnown RBP8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 HNRNPCL4P0DMR1 293 aa8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 PRG2P13727 222 aa8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 EDN3P14138 238 aa8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 NID1P14543 1247 aa8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 CALB2P22676 271 aa8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 SRD5A2P31213 254 aa8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 CPOXP36551 454 aa8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 PCBP3P57721 371 aaKnown RBP8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 EEF1A1P68104 462 aaKnown RBP8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 KCNJ10P78508 379 aa8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 HOXC5Q00444 222 aa8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 DMTNQ08495 405 aa8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 RBBP4Q09028 425 aa8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 GNA13Q14344 377 aa8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 SLC10A1Q14973 349 aa8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 LIN52Q52LA3 116 aa8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 ZNF311Q5JNZ3 666 aa8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 EIF3MQ7L2H7 374 aaKnown RBP8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 MICU2Q8IYU8 434 aa8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 PGAM4Q8N0Y7 254 aa8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 FAM71CQ8NEG0 241 aa8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 OR10Q1Q8NGQ4 319 aa8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 SMPDL3BQ92485 455 aa8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 SFXN2Q96NB2 322 aa8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 HOPXQ9BPY8 73 aaPredicted RBP8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 KCTD14Q9BQ13 255 aaPredicted RBP8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 WFDC6Q9BQY6 131 aa8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 OR2B2Q9GZK3 357 aa8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 TMEM185BQ9H7F4 350 aa8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 MTHFD2LQ9H903 347 aaPredicted RBP8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 CACYBPQ9HB71 228 aaKnown RBP8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 SPAG4Q9NPE6 437 aa8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 SDHAF3Q9NRP4 125 aa8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 MED17Q9NVC6 651 aa8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 TAS2R10Q9NYW0 307 aa8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 TMEM181Q9P2C4 612 aa8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 SUCOQ9UBS9 1254 aaKnown RBP8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 ICAM5Q9UMF0 924 aa8.89□□□□□ -0.99
TOPBP1-209ENST00000513818 HEATR5AQ86XA9 2040 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 ELOVL7A1L3X0 281 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 PRORSD1PA6NEY8 169 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 ANKUB1A6NFN9 424 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 M0R3H8 397 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 CBR3O75828 277 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 IGHG3P01860 377 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 OPN1LWP04000 364 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 THBS1P07996 1170 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 GUSBP08236 651 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 PLA2G2AP14555 144 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 TNFRSF1BP20333 461 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 IL11P20809 199 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 STARP49675 285 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 P2RX1P51575 399 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 DSCR4P56555 118 aaPredicted RBP8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 EEFSECP57772 596 aaKnown RBP8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 B3GALT5-AS1P59052 145 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 CEACAM7Q14002 265 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 LARS2Q15031 903 aaKnown RBP8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 QPRTQ15274 297 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 PLPPR5Q32ZL2 321 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 OXLD1Q5BKU9 147 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 SWT1Q5T5J6 900 aaKnown RBP8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 PRAMEF8Q5VWM4 474 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 PRAMEF7Q5VXH5 474 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 POMZP3Q6PJE2 187 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 PLXDC2Q6UX71 529 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 C16orf89Q6UX73 402 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 C3P1Q6ZMU1 363 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 BNC2Q6ZN30 1099 aaPredicted RBP8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 NCCRP1Q6ZVX7 275 aaPredicted RBP8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 ZNF605Q86T29 641 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 CD163Q86VB7 1156 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 KRT73Q86Y46 540 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 ARMC8Q8IUR7 673 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 LACC1Q8IV20 430 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 MISPQ8IVT2 679 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 GHDCQ8N2G8 530 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 GPR32P1Q8NGA4 272 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 OR5M9Q8NGP3 310 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 VANGL1Q8TAA9 524 aaPredicted RBP8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 POC1BQ8TC44 478 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 FIG4Q92562 907 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 CLPTM1LQ96KA5 538 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 RNF145Q96MT1 663 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms