RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 THAP4Q8WY91 577 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 TANKQ92844 425 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 HLA-CQ95604 372 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 RELTQ969Z4 430 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 LINC00597Q9H2U6 94 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 SYNPO2LQ9H987 977 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 PIAS3Q9Y6X2 628 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 A0A0U1RQS6 177 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 IGLON5A6NGN9 336 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 H3BUI4 141 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 OIP5O43482 229 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 RNF13O43567 381 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 SCGB1D2O95969 90 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 KLK3P07288 261 aaPredicted RBP10.57□□□□□ -0.72
TCOF1-211ENST00000513346 SUOXP51687 545 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 SORDQ00796 357 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 CTBSQ01459 385 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 PEA15Q15121 130 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 RNASE10Q5GAN6 216 aaKnown RBP10.57□□□□□ -0.72
TCOF1-211ENST00000513346 ZNF529Q6P280 563 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 TDHQ8IZJ6 230 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 ZNF527Q8NB42 609 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 GPR26Q8NDV2 337 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 TTC9Q92623 222 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 C10orf90Q96M02 699 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 CASD1Q96PB1 797 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 GPR174Q9BXC1 333 aa10.57□□□□□ -0.72
TCOF1-211ENST00000513346 SPATA6Q9NWH7 488 aaPredicted RBP10.57□□□□□ -0.72
TCOF1-211ENST00000513346 NPC1O15118 1278 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 VEGFDO43915 354 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 TBPL1P62380 186 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 HBA1P69905 142 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 CYCSP99999 105 aaKnown RBP10.56□□□□□ -0.72
TCOF1-211ENST00000513346 FAM189A2Q15884 450 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 MAPK14Q16539 360 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 SLC5A12Q1EHB4 618 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 CDNFQ49AH0 187 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 ARHGAP40Q5TG30 622 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 MANEALQ5VSG8 457 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 FAHD1Q6P587 224 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 FAM122BQ7Z309 247 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 TMEM173Q86WV6 379 aaPredicted RBP10.56□□□□□ -0.72
TCOF1-211ENST00000513346 OR6M1Q8NGM8 313 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 PAQR8Q8TEZ7 354 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 SMPDL3BQ92485 455 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 PRRC1Q96M27 445 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 ZNF578Q96N58 590 aaPredicted RBP10.56□□□□□ -0.72
TCOF1-211ENST00000513346 OPALINQ96PE5 141 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 IKZF5Q9H5V7 419 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 ZNF576Q9H609 170 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 ASB6Q9NWX5 421 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 DOCK2Q92608 1830 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 EVPLQ92817 2033 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 ASXL3Q9C0F0 2248 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 UBL4AP11441 157 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 RNF144AP50876 292 aaPredicted RBP10.56□□□□□ -0.72
TCOF1-211ENST00000513346 ELOCQ15369 112 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 CST6Q15828 149 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 SFXN4Q6P4A7 337 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 ARHGAP11AQ6P4F7 1023 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 NUP54Q7Z3B4 507 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 ZNF101Q8IZC7 436 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 NKX6-2Q9C056 277 aaPredicted RBP10.56□□□□□ -0.72
TCOF1-211ENST00000513346 IL26Q9NPH9 171 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 GDE1Q9NZC3 331 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 ZMAT5Q9UDW3 170 aaKnown RBP10.56□□□□□ -0.72
TCOF1-211ENST00000513346 KIF25Q9UIL4 384 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 KIAA0355O15063 1070 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 EMC8O43402 210 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 SIX6O95475 246 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 C6P13671 934 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 ZNF35P13682 527 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 EVX1P49640 407 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 VEGFCP49767 419 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 NKG7Q16617 165 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 C18orf63Q68DL7 685 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 KIAA1211LQ6NV74 962 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 LRRC69Q6ZNQ3 347 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 TAS1R1Q7RTX1 841 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 HMGCLL1Q8TB92 370 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 SLC6A7Q99884 636 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 NIT2Q9NQR4 276 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 SERTAD3Q9UJW9 196 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 BCORQ6W2J9 1755 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 ECM29Q5VYK3 1845 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 KNTC1P50748 2209 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 TRABD2BA6NFA1 517 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 TLX3O43711 291 aaPredicted RBP10.56□□□□□ -0.72
TCOF1-211ENST00000513346 RAB3DO95716 219 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 AKAIN1P0CW23 69 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 SRCP12931 536 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 MAOAP21397 527 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 SHC1P29353 583 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 C1orf61Q13536 156 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 TSSK4Q6SA08 328 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 NXPE4Q6UWF7 544 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 LINC01465Q8N7H1 131 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 NUP43Q8NFH3 380 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 PBDC1Q9BVG4 233 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 PLEKHA1Q9HB21 404 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms