RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 TRABD2AQ86V40 505 aa9.82□□□□□ -0.84
RNF4-218ENST00000513284 ZNF433Q8N7K0 673 aaPredicted RBP9.82□□□□□ -0.84
RNF4-218ENST00000513284 CDYL2Q8N8U2 506 aa9.82□□□□□ -0.84
RNF4-218ENST00000513284 OR4C3Q8NH37 302 aa9.82□□□□□ -0.84
RNF4-218ENST00000513284 FAM110BQ8TC76 370 aa9.82□□□□□ -0.84
RNF4-218ENST00000513284 METTL6Q8TCB7 284 aa9.82□□□□□ -0.84
RNF4-218ENST00000513284 GCDHQ92947 438 aaPredicted RBP9.82□□□□□ -0.84
RNF4-218ENST00000513284 EXOSC8Q96B26 276 aaKnown RBP9.82□□□□□ -0.84
RNF4-218ENST00000513284 ZNF524Q96C55 264 aa9.82□□□□□ -0.84
RNF4-218ENST00000513284 KLHL15Q96M94 604 aa9.82□□□□□ -0.84
RNF4-218ENST00000513284 BBS4Q96RK4 519 aa9.82□□□□□ -0.84
RNF4-218ENST00000513284 ZNF382Q96SR6 550 aa9.82□□□□□ -0.84
RNF4-218ENST00000513284 INPP5KQ9BT40 448 aa9.82□□□□□ -0.84
RNF4-218ENST00000513284 BPESC1Q9GZL8 116 aa9.82□□□□□ -0.84
RNF4-218ENST00000513284 ZNF696Q9H7X3 374 aa9.82□□□□□ -0.84
RNF4-218ENST00000513284 GP6Q9HCN6 339 aa9.82□□□□□ -0.84
RNF4-218ENST00000513284 MIEF1Q9NQG6 463 aa9.82□□□□□ -0.84
RNF4-218ENST00000513284 SLC35C2Q9NQQ7 365 aa9.82□□□□□ -0.84
RNF4-218ENST00000513284 MED17Q9NVC6 651 aa9.82□□□□□ -0.84
RNF4-218ENST00000513284 METRNQ9UJH8 293 aa9.82□□□□□ -0.84
RNF4-218ENST00000513284 POU2F3Q9UKI9 436 aa9.82□□□□□ -0.84
RNF4-218ENST00000513284 MGAT4BQ9UQ53 548 aa9.82□□□□□ -0.84
RNF4-218ENST00000513284 SLC25A15Q9Y619 301 aa9.82□□□□□ -0.84
RNF4-218ENST00000513284 IGHV3-15A0A0B4J1V0 119 aa9.81□□□□□ -0.84
RNF4-218ENST00000513284 LOC390937A0A1W2PQ73 354 aa9.81□□□□□ -0.84
RNF4-218ENST00000513284 A0A1W2PR80 420 aa9.81□□□□□ -0.84
RNF4-218ENST00000513284 FAM157AC9JC47 383 aa9.81□□□□□ -0.84
RNF4-218ENST00000513284 MANBAO00462 879 aa9.81□□□□□ -0.84
RNF4-218ENST00000513284 PPP6CO00743 305 aa9.81□□□□□ -0.84
RNF4-218ENST00000513284 LILRA1O75019 489 aa9.81□□□□□ -0.84
RNF4-218ENST00000513284 PSMG1O95456 288 aa9.81□□□□□ -0.84
RNF4-218ENST00000513284 ENO1P06733 434 aaKnown RBP9.81□□□□□ -0.84
RNF4-218ENST00000513284 IL3P08700 152 aa9.81□□□□□ -0.84
RNF4-218ENST00000513284 PABPC4LP0CB38 370 aaKnown RBP9.81□□□□□ -0.84
RNF4-218ENST00000513284 DHRS4L1P0CG22 281 aa9.81□□□□□ -0.84
RNF4-218ENST00000513284 TSPAN8P19075 237 aa9.81□□□□□ -0.84
RNF4-218ENST00000513284 GGT1P19440 569 aa9.81□□□□□ -0.84
RNF4-218ENST00000513284 ATP5F1P24539 256 aaPredicted RBP9.81□□□□□ -0.84
RNF4-218ENST00000513284 PTAFRP25105 342 aa9.81□□□□□ -0.84
RNF4-218ENST00000513284 NTSP30990 170 aa9.81□□□□□ -0.84
RNF4-218ENST00000513284 TIA1P31483 386 aaKnown RBP eCLIP9.81□□□□□ -0.845e-7■■■■□ 23.6
RNF4-218ENST00000513284 APOBEC3AP31941 199 aaPredicted RBP9.81□□□□□ -0.84
RNF4-218ENST00000513284 SFTPDP35247 375 aa9.81□□□□□ -0.84
RNF4-218ENST00000513284 FOXG1P55316 489 aaPredicted RBP9.81□□□□□ -0.84
RNF4-218ENST00000513284 PKNOX1P55347 436 aa9.81□□□□□ -0.84
RNF4-218ENST00000513284 RAE1P78406 368 aaKnown RBP9.81□□□□□ -0.84
RNF4-218ENST00000513284 ZNF155Q12901 538 aaPredicted RBP9.81□□□□□ -0.84
RNF4-218ENST00000513284 IMPG1Q17R60 797 aa9.81□□□□□ -0.84
RNF4-218ENST00000513284 GLE1Q53GS7 698 aaKnown RBP9.81□□□□□ -0.84
RNF4-218ENST00000513284 ZNF678Q5SXM1 525 aa9.81□□□□□ -0.84
RNF4-218ENST00000513284 HIST2H2BDQ6DRA6 164 aa9.81□□□□□ -0.84
RNF4-218ENST00000513284 TMEM108Q6UXF1 575 aa9.81□□□□□ -0.84
RNF4-218ENST00000513284 DEF8Q6ZN54 512 aa9.81□□□□□ -0.84
RNF4-218ENST00000513284 FCRLAQ7L513 359 aa9.81□□□□□ -0.84
RNF4-218ENST00000513284 P2RY8Q86VZ1 359 aa9.81□□□□□ -0.84
RNF4-218ENST00000513284 OR52N5Q8NH56 324 aa9.81□□□□□ -0.84
RNF4-218ENST00000513284 FAM216AQ8WUB2 273 aa9.81□□□□□ -0.84
RNF4-218ENST00000513284 IFT81Q8WYA0 676 aa9.81□□□□□ -0.84
RNF4-218ENST00000513284 CCDC126Q96EE4 140 aa9.81□□□□□ -0.84
RNF4-218ENST00000513284 PSD2Q9BQI7 771 aa9.81□□□□□ -0.84
RNF4-218ENST00000513284 PIMREGQ9BSJ6 248 aa9.81□□□□□ -0.84
RNF4-218ENST00000513284 C1QTNF6Q9BXI9 259 aa9.81□□□□□ -0.84
RNF4-218ENST00000513284 TBL1XR1Q9BZK7 514 aa9.81□□□□□ -0.84
RNF4-218ENST00000513284 IQCGQ9H095 443 aaKnown RBP9.81□□□□□ -0.84
RNF4-218ENST00000513284 HEATR1Q9H583 2144 aaKnown RBP9.81□□□□□ -0.84
RNF4-218ENST00000513284 BCO1Q9HAY6 547 aa9.81□□□□□ -0.84
RNF4-218ENST00000513284 C3orf14Q9HBI5 128 aa9.81□□□□□ -0.84
RNF4-218ENST00000513284 Q9N2J8 555 aa9.81□□□□□ -0.84
RNF4-218ENST00000513284 GRID1Q9ULK0 1009 aa9.81□□□□□ -0.84
RNF4-218ENST00000513284 PMF1-BGLAPU3KQ54 211 aa9.81□□□□□ -0.84
RNF4-218ENST00000513284 A0A087WV62 115 aa9.8□□□□□ -0.84
RNF4-218ENST00000513284 TTC36A6NLP5 189 aa9.8□□□□□ -0.84
RNF4-218ENST00000513284 UPK1AO00322 258 aa9.8□□□□□ -0.84
RNF4-218ENST00000513284 NDUFB5O43674 189 aa9.8□□□□□ -0.84
RNF4-218ENST00000513284 CRCPO75575 148 aa9.8□□□□□ -0.84
RNF4-218ENST00000513284 RGS9O75916 674 aaPredicted RBP9.8□□□□□ -0.84
RNF4-218ENST00000513284 LINGO3P0C6S8 592 aa9.8□□□□□ -0.84
RNF4-218ENST00000513284 IMPDH1P20839 514 aa9.8□□□□□ -0.84
RNF4-218ENST00000513284 ECHS1P30084 290 aa9.8□□□□□ -0.84
RNF4-218ENST00000513284 NTF4P34130 210 aa9.8□□□□□ -0.84
RNF4-218ENST00000513284 ACTG1P63261 375 aa9.8□□□□□ -0.84
RNF4-218ENST00000513284 CHRNB3Q05901 458 aa9.8□□□□□ -0.84
RNF4-218ENST00000513284 SLC18A2Q05940 514 aa9.8□□□□□ -0.84
RNF4-218ENST00000513284 LGALS3BPQ08380 585 aa9.8□□□□□ -0.84
RNF4-218ENST00000513284 ZNF763Q0D2J5 394 aa9.8□□□□□ -0.84
RNF4-218ENST00000513284 LCP2Q13094 533 aa9.8□□□□□ -0.84
RNF4-218ENST00000513284 PDCD2Q16342 344 aaPredicted RBP9.8□□□□□ -0.84
RNF4-218ENST00000513284 DECR1Q16698 335 aa9.8□□□□□ -0.84
RNF4-218ENST00000513284 IQCCQ4KMZ1 466 aa9.8□□□□□ -0.84
RNF4-218ENST00000513284 SPDYAQ5MJ70 313 aa9.8□□□□□ -0.84
RNF4-218ENST00000513284 TIFABQ6ZNK6 161 aa9.8□□□□□ -0.84
RNF4-218ENST00000513284 ZAR1Q86SH2 424 aa9.8□□□□□ -0.84
RNF4-218ENST00000513284 PEG10Q86TG7 708 aaKnown RBP9.8□□□□□ -0.84
RNF4-218ENST00000513284 HOMEZQ8IX15 550 aa9.8□□□□□ -0.84
RNF4-218ENST00000513284 ANKS4BQ8N8V4 417 aa9.8□□□□□ -0.84
RNF4-218ENST00000513284 WDR31Q8NA23 367 aa9.8□□□□□ -0.84
RNF4-218ENST00000513284 ACTRT2Q8TDY3 377 aa9.8□□□□□ -0.84
RNF4-218ENST00000513284 C16orf78Q8WTQ4 265 aa9.8□□□□□ -0.84
RNF4-218ENST00000513284 DCAKDQ8WVC6 231 aa9.8□□□□□ -0.84
RNF4-218ENST00000513284 ZBTB8AQ96BR9 441 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms