RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 PRAMEF20Q5VT98 475 aa9.93□□□□□ -0.82
PFDN1-204ENST00000512707 FNDC7Q5VTL7 733 aa9.93□□□□□ -0.82
PFDN1-204ENST00000512707 ZADH2Q8N4Q0 377 aa9.93□□□□□ -0.82
PFDN1-204ENST00000512707 TMEM178AQ8NBL3 297 aa9.93□□□□□ -0.82
PFDN1-204ENST00000512707 FAM71CQ8NEG0 241 aa9.93□□□□□ -0.82
PFDN1-204ENST00000512707 FDCSPQ8NFU4 85 aa9.93□□□□□ -0.82
PFDN1-204ENST00000512707 OR4K17Q8NGC6 315 aa9.93□□□□□ -0.82
PFDN1-204ENST00000512707 B4GALNT2Q8NHY0 566 aa9.93□□□□□ -0.82
PFDN1-204ENST00000512707 DUSP19Q8WTR2 217 aa9.93□□□□□ -0.82
PFDN1-204ENST00000512707 CNOT9Q92600 299 aaKnown RBP9.93□□□□□ -0.82
PFDN1-204ENST00000512707 HAS2Q92819 552 aa9.93□□□□□ -0.82
PFDN1-204ENST00000512707 SDCCAG3Q96C92 435 aa9.93□□□□□ -0.82
PFDN1-204ENST00000512707 SH3YL1Q96HL8 342 aaPredicted RBP9.93□□□□□ -0.82
PFDN1-204ENST00000512707 ZNF597Q96LX8 424 aa9.93□□□□□ -0.82
PFDN1-204ENST00000512707 ZNF300Q96RE9 604 aaPredicted RBP9.93□□□□□ -0.82
PFDN1-204ENST00000512707 MCHR1Q99705 422 aa9.93□□□□□ -0.82
PFDN1-204ENST00000512707 PIP5K1AQ99755 562 aa9.93□□□□□ -0.82
PFDN1-204ENST00000512707 FNDC11Q9BVV2 318 aa9.93□□□□□ -0.82
PFDN1-204ENST00000512707 ANGPTL4Q9BY76 406 aa9.93□□□□□ -0.82
PFDN1-204ENST00000512707 REEP1Q9H902 201 aa9.93□□□□□ -0.82
PFDN1-204ENST00000512707 RNPEPL1Q9HAU8 725 aa9.93□□□□□ -0.82
PFDN1-204ENST00000512707 DNAJB9Q9UBS3 223 aa9.93□□□□□ -0.82
PFDN1-204ENST00000512707 B4GALT7Q9UBV7 327 aa9.93□□□□□ -0.82
PFDN1-204ENST00000512707 BOKQ9UMX3 212 aaPredicted RBP9.93□□□□□ -0.82
PFDN1-204ENST00000512707 CARD8Q9Y2G2 431 aa9.93□□□□□ -0.82
PFDN1-204ENST00000512707 KLF13Q9Y2Y9 288 aaPredicted RBP9.93□□□□□ -0.82
PFDN1-204ENST00000512707 PCDHGB7Q9Y5F8 929 aa9.93□□□□□ -0.82
PFDN1-204ENST00000512707 FLNBO75369 2602 aaKnown RBP9.93□□□□□ -0.82
PFDN1-204ENST00000512707 KLRC4-KLRK1H3BQV0 150 aa9.92□□□□□ -0.82
PFDN1-204ENST00000512707 CLOCKO15516 846 aa9.92□□□□□ -0.82
PFDN1-204ENST00000512707 ATP6V1G2O95670 118 aa9.92□□□□□ -0.82
PFDN1-204ENST00000512707 MT-ND1P03886 318 aa9.92□□□□□ -0.82
PFDN1-204ENST00000512707 CCL3P10147 92 aa9.92□□□□□ -0.82
PFDN1-204ENST00000512707 CNR1P21554 472 aa9.92□□□□□ -0.82
PFDN1-204ENST00000512707 RYKP34925 604 aa9.92□□□□□ -0.82
PFDN1-204ENST00000512707 VLDLRP98155 873 aa9.92□□□□□ -0.82
PFDN1-204ENST00000512707 SPIBQ01892 262 aa9.92□□□□□ -0.82
PFDN1-204ENST00000512707 ZNF117Q03924 483 aa9.92□□□□□ -0.82
PFDN1-204ENST00000512707 ATP6AP1Q15904 470 aa9.92□□□□□ -0.82
PFDN1-204ENST00000512707 COL28A1Q2UY09 1125 aa9.92□□□□□ -0.82
PFDN1-204ENST00000512707 SWT1Q5T5J6 900 aaKnown RBP9.92□□□□□ -0.82
PFDN1-204ENST00000512707 ZNF468Q5VIY5 522 aaPredicted RBP9.92□□□□□ -0.82
PFDN1-204ENST00000512707 DESI1Q6ICB0 168 aa9.92□□□□□ -0.82
PFDN1-204ENST00000512707 OR2T5Q6IEZ7 315 aa9.92□□□□□ -0.82
PFDN1-204ENST00000512707 C19orf48Q6RUI8 117 aa9.92□□□□□ -0.82
PFDN1-204ENST00000512707 APOOLQ6UXV4 268 aa9.92□□□□□ -0.82
PFDN1-204ENST00000512707 PQLC1Q8N2U9 271 aa9.92□□□□□ -0.82
PFDN1-204ENST00000512707 FAM98AQ8NCA5 519 aaKnown RBP9.92□□□□□ -0.82
PFDN1-204ENST00000512707 PIK3C3Q8NEB9 887 aa9.92□□□□□ -0.82
PFDN1-204ENST00000512707 OR6T1Q8NGN1 323 aa9.92□□□□□ -0.82
PFDN1-204ENST00000512707 OR1J4Q8NGS1 313 aa9.92□□□□□ -0.82
PFDN1-204ENST00000512707 OR2T29Q8NH02 315 aa9.92□□□□□ -0.82
PFDN1-204ENST00000512707 OR5W2Q8NH69 310 aa9.92□□□□□ -0.82
PFDN1-204ENST00000512707 ZNF563Q8TA94 476 aa9.92□□□□□ -0.82
PFDN1-204ENST00000512707 PHF10Q8WUB8 498 aaKnown RBP9.92□□□□□ -0.82
PFDN1-204ENST00000512707 RNF138Q8WVD3 245 aa9.92□□□□□ -0.82
PFDN1-204ENST00000512707 TMEM234Q8WY98 164 aa9.92□□□□□ -0.82
PFDN1-204ENST00000512707 SLCO4A1Q96BD0 722 aa9.92□□□□□ -0.82
PFDN1-204ENST00000512707 C7orf34Q96L11 122 aa9.92□□□□□ -0.82
PFDN1-204ENST00000512707 PRRC1Q96M27 445 aa9.92□□□□□ -0.82
PFDN1-204ENST00000512707 SMAD5Q99717 465 aaKnown RBP9.92□□□□□ -0.82
PFDN1-204ENST00000512707 FAM173AQ9BQD7 235 aa9.92□□□□□ -0.82
PFDN1-204ENST00000512707 ARHGAP9Q9BRR9 750 aa9.92□□□□□ -0.82
PFDN1-204ENST00000512707 AMBRA1Q9C0C7 1298 aa9.92□□□□□ -0.82
PFDN1-204ENST00000512707 RASSF4Q9H2L5 321 aa9.92□□□□□ -0.82
PFDN1-204ENST00000512707 GALNT9Q9HCQ5 603 aa9.92□□□□□ -0.82
PFDN1-204ENST00000512707 SH2D2AQ9NP31 389 aa9.92□□□□□ -0.82
PFDN1-204ENST00000512707 AGPAT4Q9NRZ5 378 aa9.92□□□□□ -0.82
PFDN1-204ENST00000512707 PLA2G3Q9NZ20 509 aa9.92□□□□□ -0.82
PFDN1-204ENST00000512707 NDUFAF4Q9P032 175 aa9.92□□□□□ -0.82
PFDN1-204ENST00000512707 STX18Q9P2W9 335 aaKnown RBP9.92□□□□□ -0.82
PFDN1-204ENST00000512707 CNOT11Q9UKZ1 510 aaKnown RBP9.92□□□□□ -0.82
PFDN1-204ENST00000512707 TRAV17A0A0B4J275 112 aa9.91□□□□□ -0.82
PFDN1-204ENST00000512707 TRAPPC13A5PLN9 417 aa9.91□□□□□ -0.82
PFDN1-204ENST00000512707 ANKUB1A6NFN9 424 aa9.91□□□□□ -0.82
PFDN1-204ENST00000512707 CPSF4LA6NMK7 179 aaKnown RBP9.91□□□□□ -0.82
PFDN1-204ENST00000512707 TMEM229AB2RXF0 380 aa9.91□□□□□ -0.82
PFDN1-204ENST00000512707 H3BNX3 289 aa9.91□□□□□ -0.82
PFDN1-204ENST00000512707 FAAHO00519 579 aa9.91□□□□□ -0.82
PFDN1-204ENST00000512707 FRS3O43559 492 aa9.91□□□□□ -0.82
PFDN1-204ENST00000512707 DPM1O60762 260 aa9.91□□□□□ -0.82
PFDN1-204ENST00000512707 OR5F1O95221 314 aa9.91□□□□□ -0.82
PFDN1-204ENST00000512707 GADD45GO95257 159 aa9.91□□□□□ -0.82
PFDN1-204ENST00000512707 F10P00742 488 aa9.91□□□□□ -0.82
PFDN1-204ENST00000512707 H1F0P07305 194 aaKnown RBP9.91□□□□□ -0.82
PFDN1-204ENST00000512707 GKN3PP0CG01 181 aa9.91□□□□□ -0.82
PFDN1-204ENST00000512707 THRBP10828 461 aa9.91□□□□□ -0.82
PFDN1-204ENST00000512707 GP1BBP13224 206 aa9.91□□□□□ -0.82
PFDN1-204ENST00000512707 ANPEPP15144 967 aa9.91□□□□□ -0.82
PFDN1-204ENST00000512707 ST3GAL3Q11203 375 aa9.91□□□□□ -0.82
PFDN1-204ENST00000512707 EPS8Q12929 822 aa9.91□□□□□ -0.82
PFDN1-204ENST00000512707 GANABQ14697 944 aaKnown RBP9.91□□□□□ -0.82
PFDN1-204ENST00000512707 NDUFAF6Q330K2 333 aa9.91□□□□□ -0.82
PFDN1-204ENST00000512707 COLEC12Q5KU26 742 aa9.91□□□□□ -0.82
PFDN1-204ENST00000512707 ENTPD8Q5MY95 495 aa9.91□□□□□ -0.82
PFDN1-204ENST00000512707 BICRALQ6AI39 1079 aa9.91□□□□□ -0.82
PFDN1-204ENST00000512707 WBP2NLQ6ICG8 309 aa9.91□□□□□ -0.82
PFDN1-204ENST00000512707 SPINK14Q6IE38 97 aa9.91□□□□□ -0.82
PFDN1-204ENST00000512707 SLC25A25Q6KCM7 469 aa9.91□□□□□ -0.82
PFDN1-204ENST00000512707 ZNF613Q6PF04 617 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms